RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 NLRP5P59047 1200 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 PDE4BQ07343 736 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 TSNAXIP1Q2TAA8 658 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 CROCCP2Q86T23 111 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 MSANTD4Q8NCY6 345 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 PAIP2Q9BPZ3 127 aaKnown RBP13.82□□□□□ -0.2
SHANK2-203ENST00000409161 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 SLC5A1P13866 664 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 CFAP58Q5T655 872 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 AK9Q5TCS8 1911 aa13.82□□□□□ -0.2
SHANK2-203ENST00000409161 PSMC4P43686 418 aa13.81□□□□□ -0.2
SHANK2-203ENST00000409161 TPD52P55327 224 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 TRERF1Q96PN7 1200 aa13.81□□□□□ -0.2
SHANK2-203ENST00000409161 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
SHANK2-203ENST00000409161 MRPS9P82933 396 aaKnown RBP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 CLUL1Q15846 466 aa13.81□□□□□ -0.2
SHANK2-203ENST00000409161 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 TBC1D2Q9BYX2 928 aa13.81□□□□□ -0.2
SHANK2-203ENST00000409161 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 GJB2P29033 226 aa13.81□□□□□ -0.2
SHANK2-203ENST00000409161 CRACR2BQ8N4Y2 399 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 PRC1O43663 620 aa13.81□□□□□ -0.2
SHANK2-203ENST00000409161 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-203ENST00000409161 NDC80O14777 642 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 CAMSAP2Q08AD1 1489 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 SARNPP82979 210 aaKnown RBP13.8□□□□□ -0.2
SHANK2-203ENST00000409161 RPUSD2Q8IZ73 545 aaKnown RBP13.8□□□□□ -0.2
SHANK2-203ENST00000409161 TXNDC16Q9P2K2 825 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 NSD2O96028 1365 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 PSMA7O14818 248 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 ARHGAP25P42331 645 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 SPAG5Q96R06 1193 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 LIG1P18858 919 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 SMAP1Q8IYB5 467 aaPredicted RBP13.8□□□□□ -0.2
SHANK2-203ENST00000409161 ARHGAP24Q8N264 748 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
SHANK2-203ENST00000409161 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 MYO1BO43795 1136 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 GPR161Q8N6U8 529 aaKnown RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 CEP120Q8N960 986 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 TNNC1P63316 161 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 BICDL1Q6ZP65 573 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 PHLDB2Q86SQ0 1253 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 RALGAPBQ86X10 1494 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 CFAP157Q5JU67 520 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 CPLX3Q8WVH0 158 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 ZKSCAN5Q9Y2L8 839 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 CASQ2O14958 399 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 STAT6P42226 847 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 SETD1BQ9UPS6 1966 aaKnown RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 IFIT3O14879 490 aaKnown RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 IARSP41252 1262 aaKnown RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 TMPOP42166 694 aaKnown RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 SNX16P57768 344 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 NAA25Q14CX7 972 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 NCAPD3P42695 1498 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 CSRNP2Q9H175 543 aa13.79□□□□□ -0.2
SHANK2-203ENST00000409161 IFIT5Q13325 482 aaKnown RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 UTP14AQ9BVJ6 771 aaKnown RBP13.79□□□□□ -0.2
SHANK2-203ENST00000409161 CFTRP13569 1480 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 MINDY4BA8MYZ0 360 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 SSFA2P28290 1259 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 SYT1P21579 422 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 FYB2Q5VWT5 728 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
SHANK2-203ENST00000409161 ABCF2Q9UG63 623 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 GAS8O95995 478 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 SLC52A1Q9NWF4 448 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.2
SHANK2-203ENST00000409161 INTS8Q75QN2 995 aaKnown RBP13.78□□□□□ -0.2
SHANK2-203ENST00000409161 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-203ENST00000409161 FEZ2Q9UHY8 353 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-203ENST00000409161 GSTA5Q7RTV2 222 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 KRT13P13646 458 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 GABPB2Q8TAK5 448 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-203ENST00000409161 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 PRAM1Q96QH2 718 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 CDK19Q9BWU1 502 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 EXOC6BQ9Y2D4 811 aa13.78□□□□□ -0.2
SHANK2-203ENST00000409161 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.2
SHANK2-203ENST00000409161 AMOTQ4VCS5 1084 aa13.77□□□□□ -0.2
SHANK2-203ENST00000409161 NKIRAS1Q9NYS0 192 aa13.77□□□□□ -0.2
SHANK2-203ENST00000409161 FAM177BA6PVY3 158 aa13.77□□□□□ -0.2
SHANK2-203ENST00000409161 CNGA4Q8IV77 575 aa13.77□□□□□ -0.2
SHANK2-203ENST00000409161 AFAP1L2Q8N4X5 818 aa13.77□□□□□ -0.2
SHANK2-203ENST00000409161 SPTY2D1Q68D10 685 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-203ENST00000409161 ATL3Q6DD88 541 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 ANO6Q4KMQ2 910 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 IMPG2Q9BZV3 1241 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 DNAI1Q9UI46 699 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 RNF168Q8IYW5 571 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-203ENST00000409161 NCOA7Q8NI08 942 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 IL1RAPL2Q9NP60 686 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 VPS18Q9P253 973 aa13.77□□□□□ -0.21
SHANK2-203ENST00000409161 MTUS1Q9ULD2 1270 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms