RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 H7C1W4 665 aa22.81■■□□□ 1.24
PDLIM2-206ENST00000409141 SLC51AQ86UW1 340 aa22.81■■□□□ 1.24
PDLIM2-206ENST00000409141 SP8Q8IXZ3 490 aa22.81■■□□□ 1.24
PDLIM2-206ENST00000409141 PSMD1Q99460 953 aa22.81■■□□□ 1.24
PDLIM2-206ENST00000409141 CT47B1P0C2W7 299 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-206ENST00000409141 ALDH1L2Q3SY69 923 aa22.8■■□□□ 1.24
PDLIM2-206ENST00000409141 CCDC152Q4G0S7 254 aa22.8■■□□□ 1.24
PDLIM2-206ENST00000409141 BEND3Q5T5X7 828 aa22.8■■□□□ 1.24
PDLIM2-206ENST00000409141 SLC4A10Q6U841 1118 aa22.8■■□□□ 1.24
PDLIM2-206ENST00000409141 UBE3BQ7Z3V4 1068 aa22.8■■□□□ 1.24
PDLIM2-206ENST00000409141 BCL2L13Q9BXK5 485 aa22.8■■□□□ 1.24
PDLIM2-206ENST00000409141 CCDC88AQ3V6T2 1871 aa22.79■■□□□ 1.24
PDLIM2-206ENST00000409141 TMC4Q7Z404 712 aa22.79■■□□□ 1.24
PDLIM2-206ENST00000409141 CELF1Q92879 486 aaKnown RBP22.79■■□□□ 1.24
PDLIM2-206ENST00000409141 KDM2BQ8NHM5 1336 aa22.79■■□□□ 1.24
PDLIM2-206ENST00000409141 CCDC85AQ96PX6 553 aaPredicted RBP22.79■■□□□ 1.24
PDLIM2-206ENST00000409141 SMC4Q9NTJ3 1288 aa22.79■■□□□ 1.24
PDLIM2-206ENST00000409141 IARSP41252 1262 aaKnown RBP22.78■■□□□ 1.24
PDLIM2-206ENST00000409141 SEC31BQ9NQW1 1179 aa22.78■■□□□ 1.24
PDLIM2-206ENST00000409141 SNED1Q8TER0 1413 aa22.77■■□□□ 1.24
PDLIM2-206ENST00000409141 GLTPD2A6NH11 291 aa22.77■■□□□ 1.24
PDLIM2-206ENST00000409141 CTSWP56202 376 aa22.77■■□□□ 1.24
PDLIM2-206ENST00000409141 RPS8P62241 208 aaKnown RBP22.77■■□□□ 1.24
PDLIM2-206ENST00000409141 DPY19L2Q6NUT2 758 aa22.77■■□□□ 1.24
PDLIM2-206ENST00000409141 PTPRCP08575 1304 aa22.77■■□□□ 1.24
PDLIM2-206ENST00000409141 MPNDQ8N594 471 aa22.76■■□□□ 1.23
PDLIM2-206ENST00000409141 SRCIN1Q9C0H9 1055 aa22.76■■□□□ 1.23
PDLIM2-206ENST00000409141 NMRK2Q9NPI5 230 aa22.76■■□□□ 1.23
PDLIM2-206ENST00000409141 DPP8Q6V1X1 898 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-206ENST00000409141 TTLL11Q8NHH1 800 aa22.75■■□□□ 1.23
PDLIM2-206ENST00000409141 TAF1P21675 1872 aa22.75■■□□□ 1.23
PDLIM2-206ENST00000409141 ALDH1L1O75891 902 aa22.74■■□□□ 1.23
PDLIM2-206ENST00000409141 CASP7P55210 303 aa22.74■■□□□ 1.23
PDLIM2-206ENST00000409141 SUPT20HQ8NEM7 779 aa22.73■■□□□ 1.23
PDLIM2-206ENST00000409141 JDP2Q8WYK2 163 aa22.73■■□□□ 1.23
PDLIM2-206ENST00000409141 PLA2G12BQ9BX93 195 aa22.73■■□□□ 1.23
PDLIM2-206ENST00000409141 RRAGCQ9HB90 399 aa22.73■■□□□ 1.23
PDLIM2-206ENST00000409141 C9orf78Q9NZ63 289 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-206ENST00000409141 KIF3CO14782 793 aa22.73■■□□□ 1.23
PDLIM2-206ENST00000409141 LARGE2Q8N3Y3 721 aa22.73■■□□□ 1.23
PDLIM2-206ENST00000409141 DICER1Q9UPY3 1922 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-206ENST00000409141 RARSP54136 660 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-206ENST00000409141 ANKRD18AQ8IVF6 992 aa22.72■■□□□ 1.23
PDLIM2-206ENST00000409141 RTFDC1Q9BY42 306 aaPredicted RBP22.72■■□□□ 1.23
PDLIM2-206ENST00000409141 GREM2Q9H772 168 aa22.72■■□□□ 1.23
PDLIM2-206ENST00000409141 NSFL1CQ9UNZ2 370 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-206ENST00000409141 TIAM2Q8IVF5 1701 aa22.71■■□□□ 1.23
PDLIM2-206ENST00000409141 GRM8O00222 908 aa22.71■■□□□ 1.23
PDLIM2-206ENST00000409141 CDC5LQ99459 802 aaKnown RBP22.71■■□□□ 1.23
PDLIM2-206ENST00000409141 VPS33BQ9H267 617 aa22.71■■□□□ 1.23
PDLIM2-206ENST00000409141 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
PDLIM2-206ENST00000409141 PPIP5K2O43314 1243 aa22.7■■□□□ 1.22
PDLIM2-206ENST00000409141 C1QTNF8P60827 252 aa22.7■■□□□ 1.22
PDLIM2-206ENST00000409141 NOB1Q9ULX3 412 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-206ENST00000409141 DDNO94850 711 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-206ENST00000409141 CSF1RP07333 972 aa22.69■■□□□ 1.22
PDLIM2-206ENST00000409141 GPSM2P81274 684 aa22.69■■□□□ 1.22
PDLIM2-206ENST00000409141 AOC3Q16853 763 aa22.69■■□□□ 1.22
PDLIM2-206ENST00000409141 COL4A1P02462 1669 aa22.69■■□□□ 1.22
PDLIM2-206ENST00000409141 FZD9O00144 591 aa22.68■■□□□ 1.22
PDLIM2-206ENST00000409141 BRPF1P55201 1214 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-206ENST00000409141 C16orf71Q8IYS4 520 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-206ENST00000409141 RTL9Q8NET4 1388 aa22.68■■□□□ 1.22
PDLIM2-206ENST00000409141 VEGFAP15692 232 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-206ENST00000409141 NIM1KQ8IY84 436 aa22.67■■□□□ 1.22
PDLIM2-206ENST00000409141 C6orf229H3BNL8 230 aa22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 ITGA6P23229 1130 aa22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 FOXO4P98177 505 aa22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 ANKIB1Q9P2G1 1089 aa22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 ZNF541Q9H0D2 1346 aa22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 EIF6P56537 245 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 KIAA2012Q0VF49 1180 aa22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 FAM161AQ3B820 660 aa22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 API5Q9BZZ5 524 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 BSDC1Q9NW68 430 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-206ENST00000409141 MYH3P11055 1940 aa22.65■■□□□ 1.22
PDLIM2-206ENST00000409141 NBPF7P0C2Y1 421 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-206ENST00000409141 IGHMBP2P38935 993 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-206ENST00000409141 WASHC4Q2M389 1173 aa22.65■■□□□ 1.22
PDLIM2-206ENST00000409141 POLLQ9UGP5 575 aa22.65■■□□□ 1.22
PDLIM2-206ENST00000409141 CHMP3Q9Y3E7 222 aa22.65■■□□□ 1.22
PDLIM2-206ENST00000409141 ANKRD18BA2A2Z9 1011 aa22.64■■□□□ 1.21
PDLIM2-206ENST00000409141 POTECB2RU33 542 aa22.64■■□□□ 1.21
PDLIM2-206ENST00000409141 TOMM70O94826 608 aa22.64■■□□□ 1.21
PDLIM2-206ENST00000409141 EPHA10Q5JZY3 1008 aa22.64■■□□□ 1.21
PDLIM2-206ENST00000409141 LMBR1LQ6UX01 489 aa22.64■■□□□ 1.21
PDLIM2-206ENST00000409141 PODXL2Q9NZ53 605 aa22.64■■□□□ 1.21
PDLIM2-206ENST00000409141 LRRC37AA6NMS7 1700 aa22.64■■□□□ 1.21
PDLIM2-206ENST00000409141 COL4A5P29400 1685 aa22.63■■□□□ 1.21
PDLIM2-206ENST00000409141 KIF16BQ96L93 1317 aa22.63■■□□□ 1.21
PDLIM2-206ENST00000409141 TBC1D16Q8TBP0 767 aa22.63■■□□□ 1.21
PDLIM2-206ENST00000409141 EYA3Q99504 573 aa22.63■■□□□ 1.21
PDLIM2-206ENST00000409141 UTYO14607 1347 aa22.62■■□□□ 1.21
PDLIM2-206ENST00000409141 RIMBP2O15034 1052 aa22.62■■□□□ 1.21
PDLIM2-206ENST00000409141 BCAR3O75815 825 aa22.62■■□□□ 1.21
PDLIM2-206ENST00000409141 CCT4P50991 539 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-206ENST00000409141 IFIT5Q13325 482 aaKnown RBP22.62■■□□□ 1.21
PDLIM2-206ENST00000409141 GPC2Q8N158 579 aa22.62■■□□□ 1.21
PDLIM2-206ENST00000409141 ARHGAP45Q92619 1136 aa22.62■■□□□ 1.21
PDLIM2-206ENST00000409141 SUCLG2Q96I99 432 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms