RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 SPEF2Q9C093 1822 aa16.89■□□□□ 0.29
PRAME-206ENST00000406503 CASP8AP2Q9UKL3 1982 aa16.88■□□□□ 0.29
PRAME-206ENST00000406503 YDJCA8MPS7 323 aa16.87■□□□□ 0.29
PRAME-206ENST00000406503 BBOX1O75936 387 aa16.87■□□□□ 0.29
PRAME-206ENST00000406503 HSPA8P11142 646 aaKnown RBP16.87■□□□□ 0.29
PRAME-206ENST00000406503 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
PRAME-206ENST00000406503 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
PRAME-206ENST00000406503 GRAPQ13588 217 aa16.87■□□□□ 0.29
PRAME-206ENST00000406503 GRAPLQ8TC17 118 aaPredicted RBP16.87■□□□□ 0.29
PRAME-206ENST00000406503 ADARB2Q9NS39 739 aaKnown RBP16.87■□□□□ 0.29
PRAME-206ENST00000406503 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
PRAME-206ENST00000406503 ZNRF3Q9ULT6 936 aa16.87■□□□□ 0.29
PRAME-206ENST00000406503 ABT1Q9ULW3 272 aaKnown RBP16.87■□□□□ 0.29
PRAME-206ENST00000406503 SH3TC1Q8TE82 1336 aa16.87■□□□□ 0.29
PRAME-206ENST00000406503 SHTN1A0MZ66 631 aa16.86■□□□□ 0.29
PRAME-206ENST00000406503 GMPSP49915 693 aaPredicted RBP16.86■□□□□ 0.29
PRAME-206ENST00000406503 LBX1P52954 281 aa16.86■□□□□ 0.29
PRAME-206ENST00000406503 DDX10Q13206 875 aaKnown RBP16.86■□□□□ 0.29
PRAME-206ENST00000406503 DPP8Q6V1X1 898 aaPredicted RBP16.86■□□□□ 0.29
PRAME-206ENST00000406503 MPNDQ8N594 471 aa16.86■□□□□ 0.29
PRAME-206ENST00000406503 RUNDC1Q96C34 613 aa16.86■□□□□ 0.29
PRAME-206ENST00000406503 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
PRAME-206ENST00000406503 HIRAP54198 1017 aaPredicted RBP16.85■□□□□ 0.29
PRAME-206ENST00000406503 CYP4F22Q6NT55 531 aa16.85■□□□□ 0.29
PRAME-206ENST00000406503 SUPT20HQ8NEM7 779 aa16.85■□□□□ 0.29
PRAME-206ENST00000406503 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
PRAME-206ENST00000406503 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
PRAME-206ENST00000406503 DDX46Q7L014 1031 aaKnown RBP16.84■□□□□ 0.29
PRAME-206ENST00000406503 PLBD2Q8NHP8 589 aa16.84■□□□□ 0.29
PRAME-206ENST00000406503 TRPM4Q8TD43 1214 aa16.84■□□□□ 0.29
PRAME-206ENST00000406503 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
PRAME-206ENST00000406503 AIDAQ96BJ3 306 aa16.84■□□□□ 0.29
PRAME-206ENST00000406503 PGAP2Q9UHJ9 254 aa16.84■□□□□ 0.29
PRAME-206ENST00000406503 LAS1LQ9Y4W2 734 aaKnown RBP16.84■□□□□ 0.29
PRAME-206ENST00000406503 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
PRAME-206ENST00000406503 RAD17O75943 681 aa16.83■□□□□ 0.28
PRAME-206ENST00000406503 HOXB7P09629 217 aa16.83■□□□□ 0.28
PRAME-206ENST00000406503 CIAPIN1Q6FI81 312 aa16.83■□□□□ 0.28
PRAME-206ENST00000406503 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
PRAME-206ENST00000406503 CAPNS2Q96L46 248 aa16.83■□□□□ 0.28
PRAME-206ENST00000406503 CDHR2Q9BYE9 1310 aa16.83■□□□□ 0.28
PRAME-206ENST00000406503 GLIS2Q9BZE0 524 aaPredicted RBP16.83■□□□□ 0.28
PRAME-206ENST00000406503 ATP5J2-PTCD1G3V325 749 aa16.82■□□□□ 0.28
PRAME-206ENST00000406503 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
PRAME-206ENST00000406503 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
PRAME-206ENST00000406503 ZNF853P0CG23 659 aa16.81■□□□□ 0.28
PRAME-206ENST00000406503 MAP2K1Q02750 393 aaPredicted RBP16.81■□□□□ 0.28
PRAME-206ENST00000406503 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
PRAME-206ENST00000406503 TMX4Q9H1E5 349 aaPredicted RBP16.81■□□□□ 0.28
PRAME-206ENST00000406503 MBIPQ9NS73 344 aa16.81■□□□□ 0.28
PRAME-206ENST00000406503 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
PRAME-206ENST00000406503 AOC2O75106 756 aa16.8■□□□□ 0.28
PRAME-206ENST00000406503 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
PRAME-206ENST00000406503 SAPCD2Q86UD0 394 aa16.8■□□□□ 0.28
PRAME-206ENST00000406503 AKAP11Q9UKA4 1901 aa16.8■□□□□ 0.28
PRAME-206ENST00000406503 WDR43Q15061 677 aaKnown RBP eCLIP16.79■□□□□ 0.288e-17■□□□□ 8.1
PRAME-206ENST00000406503 DLK2Q6UY11 383 aa16.79■□□□□ 0.28
PRAME-206ENST00000406503 TMC4Q7Z404 712 aa16.79■□□□□ 0.28
PRAME-206ENST00000406503 GPR101Q96P66 508 aaPredicted RBP16.79■□□□□ 0.28
PRAME-206ENST00000406503 POLLQ9UGP5 575 aa16.79■□□□□ 0.28
PRAME-206ENST00000406503 CNOT7Q9UIV1 285 aaKnown RBP16.79■□□□□ 0.28
PRAME-206ENST00000406503 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
PRAME-206ENST00000406503 TNRC18O15417 2968 aaPredicted RBP16.79■□□□□ 0.28
PRAME-206ENST00000406503 RTL9Q8NET4 1388 aa16.78■□□□□ 0.28
PRAME-206ENST00000406503 PSMD14O00487 310 aa16.78■□□□□ 0.28
PRAME-206ENST00000406503 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
PRAME-206ENST00000406503 EGFRP00533 1210 aa16.78■□□□□ 0.28
PRAME-206ENST00000406503 GPSM2P81274 684 aa16.78■□□□□ 0.28
PRAME-206ENST00000406503 TRIM28Q13263 835 aaKnown RBP16.78■□□□□ 0.28
PRAME-206ENST00000406503 TNIP1Q15025 636 aa16.78■□□□□ 0.28
PRAME-206ENST00000406503 RTL5Q5HYW3 569 aaPredicted RBP16.78■□□□□ 0.28
PRAME-206ENST00000406503 ZC3H15Q8WU90 426 aaKnown RBP16.78■□□□□ 0.28
PRAME-206ENST00000406503 PHAXQ9H814 394 aaKnown RBP16.78■□□□□ 0.28
PRAME-206ENST00000406503 DBNDD1Q9H9R9 158 aa16.78■□□□□ 0.28
PRAME-206ENST00000406503 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
PRAME-206ENST00000406503 A0A1B0GUL6 1792 aa16.77■□□□□ 0.28
PRAME-206ENST00000406503 CACNA1FO60840 1977 aa16.77■□□□□ 0.28
PRAME-206ENST00000406503 ECE1P42892 770 aa16.77■□□□□ 0.28
PRAME-206ENST00000406503 GRM1Q13255 1194 aa16.77■□□□□ 0.28
PRAME-206ENST00000406503 PAXIP1Q6ZW49 1069 aaPredicted RBP16.77■□□□□ 0.28
PRAME-206ENST00000406503 MICALL2Q8IY33 904 aa16.77■□□□□ 0.28
PRAME-206ENST00000406503 BCL2L13Q9BXK5 485 aa16.77■□□□□ 0.28
PRAME-206ENST00000406503 PRKRIP1Q9H875 184 aaPredicted RBP16.77■□□□□ 0.28
PRAME-206ENST00000406503 HYPKQ9NX55 129 aa16.77■□□□□ 0.28
PRAME-206ENST00000406503 IRS4O14654 1257 aaPredicted RBP16.76■□□□□ 0.27
PRAME-206ENST00000406503 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
PRAME-206ENST00000406503 WASHC4Q2M389 1173 aa16.76■□□□□ 0.27
PRAME-206ENST00000406503 SAMD7Q7Z3H4 446 aa16.76■□□□□ 0.27
PRAME-206ENST00000406503 TSKSQ9UJT2 592 aa16.76■□□□□ 0.27
PRAME-206ENST00000406503 NSFL1CQ9UNZ2 370 aaKnown RBP16.76■□□□□ 0.27
PRAME-206ENST00000406503 TBC1D16Q8TBP0 767 aa16.75■□□□□ 0.27
PRAME-206ENST00000406503 DPF2Q92785 391 aa16.75■□□□□ 0.27
PRAME-206ENST00000406503 ABHD8Q96I13 439 aa16.75■□□□□ 0.27
PRAME-206ENST00000406503 HHIPL1Q96JK4 782 aa16.75■□□□□ 0.27
PRAME-206ENST00000406503 SEC31BQ9NQW1 1179 aa16.75■□□□□ 0.27
PRAME-206ENST00000406503 APAF1O14727 1248 aa16.74■□□□□ 0.27
PRAME-206ENST00000406503 ECE2O60344 883 aa16.74■□□□□ 0.27
PRAME-206ENST00000406503 MAP2K2P36507 400 aa16.74■□□□□ 0.27
PRAME-206ENST00000406503 CDC37L1Q7L3B6 337 aa16.74■□□□□ 0.27
PRAME-206ENST00000406503 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms