RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 RTFDC1Q9BY42 306 aaPredicted RBP19.83■□□□□ 0.77
TPM1-207ENST00000403994 TMX4Q9H1E5 349 aaPredicted RBP19.83■□□□□ 0.77
TPM1-207ENST00000403994 EIF6P56537 245 aaKnown RBP19.82■□□□□ 0.76
TPM1-207ENST00000403994 NCBP3Q53F19 620 aaKnown RBP19.82■□□□□ 0.76
TPM1-207ENST00000403994 DPP8Q6V1X1 898 aaPredicted RBP19.82■□□□□ 0.76
TPM1-207ENST00000403994 SP8Q8IXZ3 490 aa19.82■□□□□ 0.76
TPM1-207ENST00000403994 NIM1KQ8IY84 436 aa19.82■□□□□ 0.76
TPM1-207ENST00000403994 MYD88Q99836 296 aa19.82■□□□□ 0.76
TPM1-207ENST00000403994 CHMP4AQ9BY43 222 aa19.82■□□□□ 0.76
TPM1-207ENST00000403994 CACNA1FO60840 1977 aa19.82■□□□□ 0.76
TPM1-207ENST00000403994 FANCIQ9NVI1 1328 aa19.81■□□□□ 0.76
TPM1-207ENST00000403994 IRS4O14654 1257 aaPredicted RBP19.81■□□□□ 0.76
TPM1-207ENST00000403994 EPHX2P34913 555 aa19.81■□□□□ 0.76
TPM1-207ENST00000403994 SF3B3Q15393 1217 aaKnown RBP19.81■□□□□ 0.76
TPM1-207ENST00000403994 DDX58O95786 925 aaKnown RBP19.8■□□□□ 0.76
TPM1-207ENST00000403994 TMC4Q7Z404 712 aa19.8■□□□□ 0.76
TPM1-207ENST00000403994 ZBTB38Q8NAP3 1195 aaPredicted RBP19.8■□□□□ 0.76
TPM1-207ENST00000403994 SUPT20HQ8NEM7 779 aa19.8■□□□□ 0.76
TPM1-207ENST00000403994 GJA3Q9Y6H8 435 aa19.8■□□□□ 0.76
TPM1-207ENST00000403994 SPEF2Q9C093 1822 aa19.79■□□□□ 0.76
TPM1-207ENST00000403994 TWISTNBQ3B726 338 aaPredicted RBP19.79■□□□□ 0.76
TPM1-207ENST00000403994 EAPPQ56P03 285 aaPredicted RBP19.79■□□□□ 0.76
TPM1-207ENST00000403994 MPNDQ8N594 471 aa19.79■□□□□ 0.76
TPM1-207ENST00000403994 CCDC191Q8NCU4 936 aa19.79■□□□□ 0.76
TPM1-207ENST00000403994 CELF1Q92879 486 aaKnown RBP19.79■□□□□ 0.76
TPM1-207ENST00000403994 METTL22Q9BUU2 404 aaPredicted RBP19.79■□□□□ 0.76
TPM1-207ENST00000403994 VPS33BQ9H267 617 aa19.79■□□□□ 0.76
TPM1-207ENST00000403994 SCNN1DP51172 638 aa19.78■□□□□ 0.76
TPM1-207ENST00000403994 KIAA2012Q0VF49 1180 aa19.78■□□□□ 0.76
TPM1-207ENST00000403994 JMYQ8N9B5 988 aa19.78■□□□□ 0.76
TPM1-207ENST00000403994 STK31Q9BXU1 1019 aa19.78■□□□□ 0.76
TPM1-207ENST00000403994 CWC25Q9NXE8 425 aaPredicted RBP19.78■□□□□ 0.76
TPM1-207ENST00000403994 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
TPM1-207ENST00000403994 PASKQ96RG2 1323 aa19.77■□□□□ 0.76
TPM1-207ENST00000403994 PCCAP05165 728 aaPredicted RBP19.77■□□□□ 0.76
TPM1-207ENST00000403994 PNMA8AQ86V59 439 aaPredicted RBP19.77■□□□□ 0.76
TPM1-207ENST00000403994 LMOD1P29536 600 aaPredicted RBP19.76■□□□□ 0.75
TPM1-207ENST00000403994 ZNRF3Q9ULT6 936 aa19.76■□□□□ 0.75
TPM1-207ENST00000403994 PI4KAP2A4QPH2 592 aa19.75■□□□□ 0.75
TPM1-207ENST00000403994 HSP90B1P14625 803 aaKnown RBP19.75■□□□□ 0.75
TPM1-207ENST00000403994 KSR2Q6VAB6 950 aa19.75■□□□□ 0.75
TPM1-207ENST00000403994 PI4KAP1Q8N8J0 262 aa19.75■□□□□ 0.75
TPM1-207ENST00000403994 CREBZFQ9NS37 354 aa19.75■□□□□ 0.75
TPM1-207ENST00000403994 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
TPM1-207ENST00000403994 IGKV5-2P06315 115 aa19.74■□□□□ 0.75
TPM1-207ENST00000403994 CXCL9Q07325 125 aa19.74■□□□□ 0.75
TPM1-207ENST00000403994 G2E3Q7L622 706 aa19.74■□□□□ 0.75
TPM1-207ENST00000403994 WDR63Q8IWG1 891 aa19.74■□□□□ 0.75
TPM1-207ENST00000403994 CDHR2Q9BYE9 1310 aa19.74■□□□□ 0.75
TPM1-207ENST00000403994 ITGBL1O95965 494 aaPredicted RBP19.73■□□□□ 0.75
TPM1-207ENST00000403994 EPS15P42566 896 aa19.73■□□□□ 0.75
TPM1-207ENST00000403994 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
TPM1-207ENST00000403994 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
TPM1-207ENST00000403994 SCN9AQ15858 1988 aa19.72■□□□□ 0.75
TPM1-207ENST00000403994 PDE8AO60658 829 aa19.72■□□□□ 0.75
TPM1-207ENST00000403994 GPSM2P81274 684 aa19.72■□□□□ 0.75
TPM1-207ENST00000403994 CCDC152Q4G0S7 254 aa19.72■□□□□ 0.75
TPM1-207ENST00000403994 MAP1SQ66K74 1059 aaPredicted RBP19.72■□□□□ 0.75
TPM1-207ENST00000403994 FAM9BQ8IZU0 186 aa19.72■□□□□ 0.75
TPM1-207ENST00000403994 SEC31BQ9NQW1 1179 aa19.72■□□□□ 0.75
TPM1-207ENST00000403994 PSME4Q14997 1843 aa19.72■□□□□ 0.75
TPM1-207ENST00000403994 TRPM7Q96QT4 1865 aa19.71■□□□□ 0.75
TPM1-207ENST00000403994 YDJCA8MPS7 323 aa19.71■□□□□ 0.75
TPM1-207ENST00000403994 SLC4A2P04920 1241 aa19.71■□□□□ 0.75
TPM1-207ENST00000403994 RPS8P62241 208 aaKnown RBP19.71■□□□□ 0.75
TPM1-207ENST00000403994 NEXNQ0ZGT2 675 aa19.71■□□□□ 0.75
TPM1-207ENST00000403994 FLIIQ13045 1269 aa19.71■□□□□ 0.75
TPM1-207ENST00000403994 CWF19L2Q2TBE0 894 aaKnown RBP19.71■□□□□ 0.75
TPM1-207ENST00000403994 GPRC5DQ9NZD1 345 aa19.71■□□□□ 0.75
TPM1-207ENST00000403994 NSFL1CQ9UNZ2 370 aaKnown RBP19.71■□□□□ 0.75
TPM1-207ENST00000403994 NEURL1BA8MQ27 555 aa19.7■□□□□ 0.74
TPM1-207ENST00000403994 RAD17O75943 681 aa19.7■□□□□ 0.74
TPM1-207ENST00000403994 GMPSP49915 693 aaPredicted RBP19.7■□□□□ 0.74
TPM1-207ENST00000403994 CIAPIN1Q6FI81 312 aa19.7■□□□□ 0.74
TPM1-207ENST00000403994 SPINK5Q9NQ38 1064 aaPredicted RBP19.7■□□□□ 0.74
TPM1-207ENST00000403994 POLLQ9UGP5 575 aa19.7■□□□□ 0.74
TPM1-207ENST00000403994 CNTNAP1P78357 1384 aa19.7■□□□□ 0.74
TPM1-207ENST00000403994 CTSWP56202 376 aa19.69■□□□□ 0.74
TPM1-207ENST00000403994 EXOSC9Q06265 439 aaKnown RBP19.69■□□□□ 0.74
TPM1-207ENST00000403994 WASHC4Q2M389 1173 aa19.69■□□□□ 0.74
TPM1-207ENST00000403994 USP50Q70EL3 339 aaPredicted RBP19.69■□□□□ 0.74
TPM1-207ENST00000403994 CNTROBQ8N137 903 aa19.69■□□□□ 0.74
TPM1-207ENST00000403994 CCDC85AQ96PX6 553 aaPredicted RBP19.69■□□□□ 0.74
TPM1-207ENST00000403994 C6orf229H3BNL8 230 aa19.68■□□□□ 0.74
TPM1-207ENST00000403994 VAMP4O75379 141 aa19.68■□□□□ 0.74
TPM1-207ENST00000403994 GPR101Q96P66 508 aaPredicted RBP19.68■□□□□ 0.74
TPM1-207ENST00000403994 ADARB2Q9NS39 739 aaKnown RBP19.68■□□□□ 0.74
TPM1-207ENST00000403994 PODXL2Q9NZ53 605 aa19.68■□□□□ 0.74
TPM1-207ENST00000403994 RTL9Q8NET4 1388 aa19.68■□□□□ 0.74
TPM1-207ENST00000403994 TMEM88BA6NKF7 163 aa19.67■□□□□ 0.74
TPM1-207ENST00000403994 FKBP5Q13451 457 aaPredicted RBP19.67■□□□□ 0.74
TPM1-207ENST00000403994 TNIP1Q15025 636 aa19.67■□□□□ 0.74
TPM1-207ENST00000403994 TBC1D16Q8TBP0 767 aa19.67■□□□□ 0.74
TPM1-207ENST00000403994 DBNDD1Q9H9R9 158 aa19.67■□□□□ 0.74
TPM1-207ENST00000403994 MKRN1Q9UHC7 482 aaKnown RBP19.67■□□□□ 0.74
TPM1-207ENST00000403994 THSD7BQ9C0I4 1608 aa19.66■□□□□ 0.74
TPM1-207ENST00000403994 A0A1B0GUL6 1792 aa19.66■□□□□ 0.74
TPM1-207ENST00000403994 UFL1O94874 794 aa19.66■□□□□ 0.74
TPM1-207ENST00000403994 UBE3BQ7Z3V4 1068 aa19.66■□□□□ 0.74
TPM1-207ENST00000403994 EYA3Q99504 573 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms