RNA–Protein interactions for RNA: ENST00000402643.2

GAPDHP72-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 72, humanhuman

BASIC

Gene GAPDHP72, Length 1,010 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP72-201ENST00000402643 DDR1Q08345 913 aa11.69□□□□□ -0.54
GAPDHP72-201ENST00000402643 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
GAPDHP72-201ENST00000402643 COL4A1P02462 1669 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 RAB11FIP3O75154 756 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 SURF6O75683 361 aaKnown RBP11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 NYXQ9GZU5 481 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 STK32BQ9NY57 414 aa11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
GAPDHP72-201ENST00000402643 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 SASH1O94885 1247 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 SF3B3Q15393 1217 aaKnown RBP11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 ANKRD45Q5TZF3 282 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 BICDL1Q6ZP65 573 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 C3orf67Q6ZVT6 689 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 KLHDC4Q8TBB5 520 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 LNPKQ9C0E8 428 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 GREM2Q9H772 168 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 FBXO3Q9UK99 471 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 ANKRD31Q8N7Z5 1873 aa11.67□□□□□ -0.54
GAPDHP72-201ENST00000402643 CIAO1O76071 339 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 HSP90B1P14625 803 aaKnown RBP11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 HSP90AB4PQ58FF6 505 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 PRR5LQ6MZQ0 368 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 TPTE2Q6XPS3 522 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 ATG9AQ7Z3C6 839 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 RHPN1Q8TCX5 695 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 LRRCC1Q9C099 1032 aa11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.66□□□□□ -0.54
GAPDHP72-201ENST00000402643 A0A1B0GUL6 1792 aa11.65□□□□□ -0.54
GAPDHP72-201ENST00000402643 FAM177BA6PVY3 158 aa11.65□□□□□ -0.54
GAPDHP72-201ENST00000402643 EYA2O00167 538 aa11.65□□□□□ -0.54
GAPDHP72-201ENST00000402643 SMARCA5O60264 1052 aaPredicted RBP11.65□□□□□ -0.54
GAPDHP72-201ENST00000402643 ERC1Q8IUD2 1116 aa11.65□□□□□ -0.54
GAPDHP72-201ENST00000402643 KIF1BPQ96EK5 621 aa11.65□□□□□ -0.54
GAPDHP72-201ENST00000402643 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 SERPINB2P05120 415 aa11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 ITGA6P23229 1130 aa11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 IFIT5Q13325 482 aaKnown RBP11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 PLEKHM2Q8IWE5 1019 aa11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 C16orf71Q8IYS4 520 aaPredicted RBP11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 OTUD7AQ8TE49 926 aaPredicted RBP11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 OSBPL3Q9H4L5 887 aa11.64□□□□□ -0.55
GAPDHP72-201ENST00000402643 TAF1P21675 1872 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 SPEF2Q9C093 1822 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 ANKRD18BA2A2Z9 1011 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 DCAF8L1A6NGE4 600 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 IL15P40933 162 aaPredicted RBP11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 RGS3P49796 1198 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 G3BP1Q13283 466 aaKnown RBP eCLIP11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 CCDC57Q2TAC2 916 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 CRY2Q49AN0 593 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 CNBD1Q8NA66 436 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 PUS3Q9BZE2 481 aaKnown RBP11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 PDGFDQ9GZP0 370 aaPredicted RBP11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 STAP2Q9UGK3 403 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 CHMP3Q9Y3E7 222 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 RIPOR2Q9Y4F9 1068 aa11.63□□□□□ -0.55
GAPDHP72-201ENST00000402643 APBB1O00213 710 aa11.62□□□□□ -0.55
GAPDHP72-201ENST00000402643 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
GAPDHP72-201ENST00000402643 CCDC85AQ96PX6 553 aaPredicted RBP11.62□□□□□ -0.55
GAPDHP72-201ENST00000402643 SIL1Q9H173 461 aa11.62□□□□□ -0.55
GAPDHP72-201ENST00000402643 IL1RAPL2Q9NP60 686 aa11.62□□□□□ -0.55
GAPDHP72-201ENST00000402643 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
GAPDHP72-201ENST00000402643 SEC31BQ9NQW1 1179 aa11.62□□□□□ -0.55
GAPDHP72-201ENST00000402643 COL11A2P13942 1736 aaPredicted RBP11.61□□□□□ -0.55
GAPDHP72-201ENST00000402643 ARAP2Q8WZ64 1704 aa11.61□□□□□ -0.55
GAPDHP72-201ENST00000402643 MMP10P09238 476 aa11.61□□□□□ -0.55
GAPDHP72-201ENST00000402643 VGLL2Q8N8G2 317 aa11.61□□□□□ -0.55
GAPDHP72-201ENST00000402643 SLC16A10Q8TF71 515 aa11.61□□□□□ -0.55
GAPDHP72-201ENST00000402643 EAF2Q96CJ1 260 aaPredicted RBP11.61□□□□□ -0.55
GAPDHP72-201ENST00000402643 NLRP3Q96P20 1036 aa11.61□□□□□ -0.55
GAPDHP72-201ENST00000402643 AOX1Q06278 1338 aa11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 ZNF609O15014 1411 aa11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 GTF2E1P29083 439 aaPredicted RBP11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 HOXA10P31260 410 aaPredicted RBP11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 PDE1AP54750 535 aa11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 TFCP2Q12800 502 aa11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 OS9Q13438 667 aaPredicted RBP11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 KIF13BQ9NQT8 1826 aa11.6□□□□□ -0.55
GAPDHP72-201ENST00000402643 MX1P20591 662 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 ST5P78524 1137 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 TNNI3KQ59H18 835 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 BMP2KLQ5H9B9 411 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 CLASRPQ8N2M8 674 aaKnown RBP11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 CELF1Q92879 486 aaKnown RBP11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 BRIP1Q9BX63 1249 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 FPGT-TNNI3KV9GXZ4 949 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 LRRC37AA6NMS7 1700 aa11.59□□□□□ -0.55
GAPDHP72-201ENST00000402643 GSPT1P15170 499 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms