RNA–Protein interactions for RNA: ENST00000401644.6

SNED1-203, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-203ENST00000401644 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
SNED1-203ENST00000401644 RTKN2Q8IZC4 609 aa17.16■□□□□ 0.34
SNED1-203ENST00000401644 GRAPLQ8TC17 118 aaPredicted RBP17.16■□□□□ 0.34
SNED1-203ENST00000401644 ZNF526Q8TF50 670 aaPredicted RBP17.16■□□□□ 0.34
SNED1-203ENST00000401644 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
SNED1-203ENST00000401644 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
SNED1-203ENST00000401644 C9orf78Q9NZ63 289 aaPredicted RBP17.16■□□□□ 0.34
SNED1-203ENST00000401644 PPEF1O14829 653 aaPredicted RBP17.15■□□□□ 0.34
SNED1-203ENST00000401644 RNF181Q9P0P0 153 aa17.15■□□□□ 0.34
SNED1-203ENST00000401644 MYH3P11055 1940 aa17.15■□□□□ 0.34
SNED1-203ENST00000401644 ABCC4O15439 1325 aa17.15■□□□□ 0.34
SNED1-203ENST00000401644 SBF1O95248 1867 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 GRM8O00222 908 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 LMNB1P20700 586 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 CASP7P55210 303 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 CTSWP56202 376 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 RASSF7Q02833 373 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
SNED1-203ENST00000401644 NFKBIEO00221 500 aa17.13■□□□□ 0.33
SNED1-203ENST00000401644 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
SNED1-203ENST00000401644 PRELPP51888 382 aa17.13■□□□□ 0.33
SNED1-203ENST00000401644 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
SNED1-203ENST00000401644 TAOK3Q9H2K8 898 aa17.13■□□□□ 0.33
SNED1-203ENST00000401644 ATP6V0A2Q9Y487 856 aa17.13■□□□□ 0.33
SNED1-203ENST00000401644 CCDC88AQ3V6T2 1871 aa17.12■□□□□ 0.33
SNED1-203ENST00000401644 BCAR3O75815 825 aa17.12■□□□□ 0.33
SNED1-203ENST00000401644 RPS8P62241 208 aaKnown RBP17.12■□□□□ 0.33
SNED1-203ENST00000401644 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
SNED1-203ENST00000401644 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNED1-203ENST00000401644 CDC5LQ99459 802 aaKnown RBP17.11■□□□□ 0.33
SNED1-203ENST00000401644 UTYO14607 1347 aa17.11■□□□□ 0.33
SNED1-203ENST00000401644 TAF1P21675 1872 aa17.11■□□□□ 0.33
SNED1-203ENST00000401644 CSF1RP07333 972 aa17.1■□□□□ 0.33
SNED1-203ENST00000401644 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
SNED1-203ENST00000401644 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
SNED1-203ENST00000401644 PSMD1Q99460 953 aa17.1■□□□□ 0.33
SNED1-203ENST00000401644 RTL9Q8NET4 1388 aa17.1■□□□□ 0.33
SNED1-203ENST00000401644 C1QTNF8P60827 252 aa17.09■□□□□ 0.33
SNED1-203ENST00000401644 ZKSCAN2Q63HK3 967 aa17.09■□□□□ 0.33
SNED1-203ENST00000401644 ANKRD18AQ8IVF6 992 aa17.09■□□□□ 0.33
SNED1-203ENST00000401644 CELF1Q92879 486 aaKnown RBP17.09■□□□□ 0.33
SNED1-203ENST00000401644 SEC31BQ9NQW1 1179 aa17.09■□□□□ 0.33
SNED1-203ENST00000401644 HDAC5Q9UQL6 1122 aa17.09■□□□□ 0.33
SNED1-203ENST00000401644 ZC3H4Q9UPT8 1303 aaKnown RBP17.08■□□□□ 0.32
SNED1-203ENST00000401644 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
SNED1-203ENST00000401644 MPNDQ8N594 471 aa17.08■□□□□ 0.32
SNED1-203ENST00000401644 SUPT20HQ8NEM7 779 aa17.08■□□□□ 0.32
SNED1-203ENST00000401644 CCDC85AQ96PX6 553 aaPredicted RBP17.08■□□□□ 0.32
SNED1-203ENST00000401644 USP44Q9H0E7 712 aa17.08■□□□□ 0.32
SNED1-203ENST00000401644 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
SNED1-203ENST00000401644 GREM2Q9H772 168 aa17.08■□□□□ 0.32
SNED1-203ENST00000401644 DICER1Q9UPY3 1922 aaKnown RBP17.08■□□□□ 0.32
SNED1-203ENST00000401644 NBPF7P0C2Y1 421 aaPredicted RBP17.07■□□□□ 0.32
SNED1-203ENST00000401644 TRIM27P14373 513 aa17.07■□□□□ 0.32
SNED1-203ENST00000401644 FOXO4P98177 505 aa17.07■□□□□ 0.32
SNED1-203ENST00000401644 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
SNED1-203ENST00000401644 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
SNED1-203ENST00000401644 KIF3CO14782 793 aa17.06■□□□□ 0.32
SNED1-203ENST00000401644 ITGA6P23229 1130 aa17.06■□□□□ 0.32
SNED1-203ENST00000401644 IGHMBP2P38935 993 aaKnown RBP17.06■□□□□ 0.32
SNED1-203ENST00000401644 DPP8Q6V1X1 898 aaPredicted RBP17.06■□□□□ 0.32
SNED1-203ENST00000401644 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
SNED1-203ENST00000401644 KDM2BQ8NHM5 1336 aa17.05■□□□□ 0.32
SNED1-203ENST00000401644 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
SNED1-203ENST00000401644 LMBR1LQ6UX01 489 aa17.05■□□□□ 0.32
SNED1-203ENST00000401644 SUCLG2Q96I99 432 aa17.05■□□□□ 0.32
SNED1-203ENST00000401644 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
SNED1-203ENST00000401644 RTFDC1Q9BY42 306 aaPredicted RBP17.05■□□□□ 0.32
SNED1-203ENST00000401644 NMRK2Q9NPI5 230 aa17.05■□□□□ 0.32
SNED1-203ENST00000401644 ZNF277Q9NRM2 450 aaPredicted RBP17.05■□□□□ 0.32
SNED1-203ENST00000401644 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
SNED1-203ENST00000401644 SNED1Q8TER0 1413 aa17.04■□□□□ 0.32
SNED1-203ENST00000401644 MS4A1P11836 297 aa17.04■□□□□ 0.32
SNED1-203ENST00000401644 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
SNED1-203ENST00000401644 CCDC57Q2TAC2 916 aa17.04■□□□□ 0.32
SNED1-203ENST00000401644 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
SNED1-203ENST00000401644 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
SNED1-203ENST00000401644 CHMP3Q9Y3E7 222 aa17.04■□□□□ 0.32
SNED1-203ENST00000401644 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
SNED1-203ENST00000401644 GNAI3P08754 354 aa17.03■□□□□ 0.32
SNED1-203ENST00000401644 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
SNED1-203ENST00000401644 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
SNED1-203ENST00000401644 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
SNED1-203ENST00000401644 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
SNED1-203ENST00000401644 RABL6Q3YEC7 729 aaPredicted RBP17.02■□□□□ 0.32
SNED1-203ENST00000401644 DPY19L2Q6NUT2 758 aa17.02■□□□□ 0.32
SNED1-203ENST00000401644 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
SNED1-203ENST00000401644 JDP2Q8WYK2 163 aa17.02■□□□□ 0.32
SNED1-203ENST00000401644 CLUAP1Q96AJ1 413 aa17.02■□□□□ 0.32
SNED1-203ENST00000401644 KAZALD1Q96I82 304 aa17.02■□□□□ 0.32
SNED1-203ENST00000401644 BICC1Q9H694 974 aaKnown RBP17.02■□□□□ 0.32
SNED1-203ENST00000401644 RRAGCQ9HB90 399 aa17.02■□□□□ 0.32
SNED1-203ENST00000401644 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.32
SNED1-203ENST00000401644 LRRC37AA6NMS7 1700 aa17.01■□□□□ 0.31
SNED1-203ENST00000401644 GPSM2P81274 684 aa17.01■□□□□ 0.31
SNED1-203ENST00000401644 TAF7LQ5H9L4 462 aa17.01■□□□□ 0.31
SNED1-203ENST00000401644 LARGE2Q8N3Y3 721 aa17.01■□□□□ 0.31
SNED1-203ENST00000401644 EYA3Q99504 573 aa17.01■□□□□ 0.31
SNED1-203ENST00000401644 ANKIB1Q9P2G1 1089 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms