RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 TTC6Q86TZ1 520 aa16.82■□□□□ 0.28
GABPA-202ENST00000400075 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
GABPA-202ENST00000400075 NLRP5P59047 1200 aa16.82■□□□□ 0.28
GABPA-202ENST00000400075 DENND2AQ9ULE3 1009 aa16.82■□□□□ 0.28
GABPA-202ENST00000400075 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.82■□□□□ 0.286e-14■■■■■ 335.4
GABPA-202ENST00000400075 MCM9Q9NXL9 1143 aa16.82■□□□□ 0.28
GABPA-202ENST00000400075 KRT85P78386 507 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 TSPYL6Q8N831 410 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 ESR2Q92731 530 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 MAGEB6P1A0A0J9YX57 407 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 VAMP4O75379 141 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 HOMER1Q86YM7 354 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 PICK1Q9NRD5 415 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.81■□□□□ 0.28
GABPA-202ENST00000400075 MAST3O60307 1309 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 ATP8B2P98198 1209 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 SPDYE4A6NLX3 237 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 TRIM21P19474 475 aaKnown RBP16.81■□□□□ 0.28
GABPA-202ENST00000400075 TRMT1LQ7Z2T5 733 aaKnown RBP16.81■□□□□ 0.28
GABPA-202ENST00000400075 CEP131Q9UPN4 1083 aa16.81■□□□□ 0.28
GABPA-202ENST00000400075 FILIP1LQ4L180 1135 aa16.8■□□□□ 0.28
GABPA-202ENST00000400075 MRPL50Q8N5N7 158 aaKnown RBP16.8■□□□□ 0.28
GABPA-202ENST00000400075 RPS8P62241 208 aaKnown RBP16.8■□□□□ 0.28
GABPA-202ENST00000400075 NCOA7Q8NI08 942 aa16.8■□□□□ 0.28
GABPA-202ENST00000400075 WDR33Q9C0J8 1336 aaKnown RBP16.8■□□□□ 0.28
GABPA-202ENST00000400075 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
GABPA-202ENST00000400075 TMEM266Q2M3C6 531 aa16.79■□□□□ 0.28
GABPA-202ENST00000400075 THRAP3Q9Y2W1 955 aaKnown RBP16.79■□□□□ 0.28
GABPA-202ENST00000400075 TTC37Q6PGP7 1564 aa16.79■□□□□ 0.28
GABPA-202ENST00000400075 BAG4O95429 457 aaKnown RBP16.79■□□□□ 0.28
GABPA-202ENST00000400075 CCAR2Q8N163 923 aaKnown RBP16.79■□□□□ 0.28
GABPA-202ENST00000400075 SAMM50Q9Y512 469 aa16.79■□□□□ 0.28
GABPA-202ENST00000400075 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
GABPA-202ENST00000400075 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
GABPA-202ENST00000400075 C20orf194Q5TEA3 1177 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 INSRP06213 1382 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 PDIA4P13667 645 aaKnown RBP16.78■□□□□ 0.28
GABPA-202ENST00000400075 PRKG1Q13976 671 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 DLGAP5Q15398 846 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 USPL1Q5W0Q7 1092 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 HSPA1LP34931 641 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 SSRP1Q08945 709 aaKnown RBP16.78■□□□□ 0.28
GABPA-202ENST00000400075 CCDC70Q6NSX1 233 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 MICU3Q86XE3 530 aa16.78■□□□□ 0.28
GABPA-202ENST00000400075 JCADQ9P266 1359 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 EYA2O00167 538 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 C8orf76Q96K31 380 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 KRT23Q9C075 422 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 SH2D4AQ9H788 454 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 GLIPR1L2Q4G1C9 344 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 TANGO6Q9C0B7 1094 aa16.77■□□□□ 0.28
GABPA-202ENST00000400075 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.77■□□□□ 0.27
GABPA-202ENST00000400075 WTAPQ15007 396 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 ASAP1Q9ULH1 1129 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 IARSP41252 1262 aaKnown RBP16.76■□□□□ 0.27
GABPA-202ENST00000400075 GNAQP50148 359 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 BRPF1P55201 1214 aaPredicted RBP16.76■□□□□ 0.27
GABPA-202ENST00000400075 TSHZ3Q63HK5 1081 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 ANKRD44Q8N8A2 993 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 GNAT2P19087 354 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 BICC1Q9H694 974 aaKnown RBP16.76■□□□□ 0.27
GABPA-202ENST00000400075 DHX8Q14562 1220 aaKnown RBP16.76■□□□□ 0.27
GABPA-202ENST00000400075 PUM3Q15397 648 aaKnown RBP16.76■□□□□ 0.27
GABPA-202ENST00000400075 TMTC2Q8N394 836 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 DNAI2Q9GZS0 605 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 CNNM2Q9H8M5 875 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 PAG1Q9NWQ8 432 aa16.76■□□□□ 0.27
GABPA-202ENST00000400075 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 TMOD4Q9NZQ9 345 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 CEP57L1Q8IYX8 460 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 MAGEB6Q8N7X4 407 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 USP16Q9Y5T5 823 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 CHL1O00533 1208 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 MBD3O95983 291 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 CRKLP46109 303 aaKnown RBP16.75■□□□□ 0.27
GABPA-202ENST00000400075 HMGN5P82970 282 aaKnown RBP16.75■□□□□ 0.27
GABPA-202ENST00000400075 TFCP2Q12800 502 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 PDILTQ8N807 584 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 TSHZ2Q9NRE2 1034 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
GABPA-202ENST00000400075 MCM5P33992 734 aa16.74■□□□□ 0.27
GABPA-202ENST00000400075 IFIT1BQ5T764 474 aaKnown RBP16.74■□□□□ 0.27
GABPA-202ENST00000400075 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
GABPA-202ENST00000400075 K7ELQ4 463 aaPredicted RBP16.74■□□□□ 0.27
GABPA-202ENST00000400075 CKAP2LQ8IYA6 745 aa16.74■□□□□ 0.27
GABPA-202ENST00000400075 TBC1D22AQ8WUA7 517 aa16.74■□□□□ 0.27
GABPA-202ENST00000400075 ERBB3P21860 1342 aa16.74■□□□□ 0.27
GABPA-202ENST00000400075 CCDC144CPQ8IYA2 1237 aa16.73■□□□□ 0.27
GABPA-202ENST00000400075 PTPRTO14522 1441 aa16.73■□□□□ 0.27
GABPA-202ENST00000400075 TNFAIP1Q13829 316 aa16.73■□□□□ 0.27
GABPA-202ENST00000400075 PPP1R12BO60237 982 aaPredicted RBP16.73■□□□□ 0.27
GABPA-202ENST00000400075 EIF4A1P60842 406 aaKnown RBP16.73■□□□□ 0.27
GABPA-202ENST00000400075 CCT2P78371 535 aaKnown RBP16.73■□□□□ 0.27
GABPA-202ENST00000400075 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
GABPA-202ENST00000400075 GJD4Q96KN9 370 aaPredicted RBP16.73■□□□□ 0.27
GABPA-202ENST00000400075 DACH1Q9UI36 760 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms