RNA–Protein interactions for RNA: ENST00000399687.3

ABCD1P4-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 4, humanhuman

BASIC

Gene ABCD1P4, Length 604 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P4-201ENST00000399687 CTSWP56202 376 aa17.29■□□□□ 0.36
ABCD1P4-201ENST00000399687 ATF7IPQ6VMQ6 1270 aa17.29■□□□□ 0.36
ABCD1P4-201ENST00000399687 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
ABCD1P4-201ENST00000399687 RTKN2Q8IZC4 609 aa17.29■□□□□ 0.36
ABCD1P4-201ENST00000399687 ABCC4O15439 1325 aa17.28■□□□□ 0.36
ABCD1P4-201ENST00000399687 GRAPQ13588 217 aa17.28■□□□□ 0.36
ABCD1P4-201ENST00000399687 GRAPLQ8TC17 118 aaPredicted RBP17.28■□□□□ 0.36
ABCD1P4-201ENST00000399687 CDC5LQ99459 802 aaKnown RBP17.28■□□□□ 0.36
ABCD1P4-201ENST00000399687 PLA2G12BQ9BX93 195 aa17.28■□□□□ 0.36
ABCD1P4-201ENST00000399687 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
ABCD1P4-201ENST00000399687 C21orf2O43822 256 aa17.27■□□□□ 0.36
ABCD1P4-201ENST00000399687 SYNE4Q8N205 404 aa17.27■□□□□ 0.36
ABCD1P4-201ENST00000399687 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
ABCD1P4-201ENST00000399687 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.36
ABCD1P4-201ENST00000399687 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.36
ABCD1P4-201ENST00000399687 FER1L6Q2WGJ9 1857 aa17.27■□□□□ 0.35
ABCD1P4-201ENST00000399687 BCAR3O75815 825 aa17.26■□□□□ 0.35
ABCD1P4-201ENST00000399687 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
ABCD1P4-201ENST00000399687 C3orf67Q6ZVT6 689 aa17.25■□□□□ 0.35
ABCD1P4-201ENST00000399687 LRRC37AA6NMS7 1700 aa17.24■□□□□ 0.35
ABCD1P4-201ENST00000399687 TRIM27P14373 513 aa17.24■□□□□ 0.35
ABCD1P4-201ENST00000399687 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
ABCD1P4-201ENST00000399687 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
ABCD1P4-201ENST00000399687 ATP6V0A2Q9Y487 856 aa17.24■□□□□ 0.35
ABCD1P4-201ENST00000399687 UTYO14607 1347 aa17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 ZC3H4Q9UPT8 1303 aaKnown RBP17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 GNAI3P08754 354 aa17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 UBTFL1P0CB47 393 aaPredicted RBP17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 LMNB1P20700 586 aa17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 SUPT20HQ8NEM7 779 aa17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 CHMP3Q9Y3E7 222 aa17.23■□□□□ 0.35
ABCD1P4-201ENST00000399687 CASP7P55210 303 aa17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 CCDC57Q2TAC2 916 aa17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 INTS3Q68E01 1043 aaKnown RBP17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 JARID2Q92833 1246 aaPredicted RBP17.22■□□□□ 0.35
ABCD1P4-201ENST00000399687 SBF1O95248 1867 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 ANKRD18BA2A2Z9 1011 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 YY1P25490 414 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 PSMD1Q99460 953 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 MPHOSPH8Q99549 860 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 CHMP4BQ9H444 224 aaKnown RBP17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 UTRNP46939 3433 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 SPEF2Q9C093 1822 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 TIAM2Q8IVF5 1701 aa17.21■□□□□ 0.35
ABCD1P4-201ENST00000399687 DICER1Q9UPY3 1922 aaKnown RBP17.2■□□□□ 0.34
ABCD1P4-201ENST00000399687 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
ABCD1P4-201ENST00000399687 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
ABCD1P4-201ENST00000399687 GREM2Q9H772 168 aa17.2■□□□□ 0.34
ABCD1P4-201ENST00000399687 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
ABCD1P4-201ENST00000399687 TAF1P21675 1872 aa17.2■□□□□ 0.34
ABCD1P4-201ENST00000399687 CCDC88AQ3V6T2 1871 aa17.19■□□□□ 0.34
ABCD1P4-201ENST00000399687 CSF1RP07333 972 aa17.19■□□□□ 0.34
ABCD1P4-201ENST00000399687 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
ABCD1P4-201ENST00000399687 ITGA6P23229 1130 aa17.19■□□□□ 0.34
ABCD1P4-201ENST00000399687 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
ABCD1P4-201ENST00000399687 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
ABCD1P4-201ENST00000399687 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
ABCD1P4-201ENST00000399687 NFKBIEO00221 500 aa17.18■□□□□ 0.34
ABCD1P4-201ENST00000399687 LMBR1LQ6UX01 489 aa17.18■□□□□ 0.34
ABCD1P4-201ENST00000399687 ITPRIPQ8IWB1 547 aa17.18■□□□□ 0.34
ABCD1P4-201ENST00000399687 MPNDQ8N594 471 aa17.18■□□□□ 0.34
ABCD1P4-201ENST00000399687 CELF1Q92879 486 aaKnown RBP17.18■□□□□ 0.34
ABCD1P4-201ENST00000399687 VPS33BQ9H267 617 aa17.18■□□□□ 0.34
ABCD1P4-201ENST00000399687 RASSF7Q02833 373 aa17.17■□□□□ 0.34
ABCD1P4-201ENST00000399687 C9orf131Q5VYM1 1079 aa17.17■□□□□ 0.34
ABCD1P4-201ENST00000399687 EYA3Q99504 573 aa17.17■□□□□ 0.34
ABCD1P4-201ENST00000399687 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
ABCD1P4-201ENST00000399687 ANKIB1Q9P2G1 1089 aa17.17■□□□□ 0.34
ABCD1P4-201ENST00000399687 FOXO4P98177 505 aa17.16■□□□□ 0.34
ABCD1P4-201ENST00000399687 JDP2Q8WYK2 163 aa17.16■□□□□ 0.34
ABCD1P4-201ENST00000399687 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
ABCD1P4-201ENST00000399687 ANKRD2Q9GZV1 360 aa17.16■□□□□ 0.34
ABCD1P4-201ENST00000399687 BICC1Q9H694 974 aaKnown RBP17.16■□□□□ 0.34
ABCD1P4-201ENST00000399687 SEC31BQ9NQW1 1179 aa17.16■□□□□ 0.34
ABCD1P4-201ENST00000399687 XDHP47989 1333 aa17.16■□□□□ 0.34
ABCD1P4-201ENST00000399687 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
ABCD1P4-201ENST00000399687 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
ABCD1P4-201ENST00000399687 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
ABCD1P4-201ENST00000399687 NSFL1CQ9UNZ2 370 aaKnown RBP17.15■□□□□ 0.34
ABCD1P4-201ENST00000399687 SNED1Q8TER0 1413 aa17.14■□□□□ 0.33
ABCD1P4-201ENST00000399687 GNAI2P04899 355 aa17.14■□□□□ 0.33
ABCD1P4-201ENST00000399687 RTFDC1Q9BY42 306 aaPredicted RBP17.14■□□□□ 0.33
ABCD1P4-201ENST00000399687 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
ABCD1P4-201ENST00000399687 LTBP1Q14766 1721 aa17.13■□□□□ 0.33
ABCD1P4-201ENST00000399687 PPIP5K2O43314 1243 aa17.13■□□□□ 0.33
ABCD1P4-201ENST00000399687 KCNJ4P48050 445 aa17.13■□□□□ 0.33
ABCD1P4-201ENST00000399687 PDE3AQ14432 1141 aa17.13■□□□□ 0.33
ABCD1P4-201ENST00000399687 LARGE2Q8N3Y3 721 aa17.13■□□□□ 0.33
ABCD1P4-201ENST00000399687 MEIS3Q99687 375 aa17.13■□□□□ 0.33
ABCD1P4-201ENST00000399687 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
ABCD1P4-201ENST00000399687 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms