RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 GUCY1B3Q02153 619 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 KIF18AQ8NI77 898 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 RPGRIP1LQ68CZ1 1315 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 ZBTB9Q96C00 473 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 PYM1Q9BRP8 204 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 LRRC27Q9C0I9 530 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 NOC2LQ9Y3T9 749 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 C6orf163Q5TEZ5 329 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 ZBTB21Q9ULJ3 1066 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 KIF5BP33176 963 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 ATP2C2O75185 946 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 SLU7O95391 586 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 TSPY3P0CV98 308 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 TSPY8P0CW00 308 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 PRPF4BQ13523 1007 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 DDX12PQ92771 950 aa12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 NIP7Q9Y221 180 aaKnown RBP eCLIP12.64□□□□□ -0.39
CACNA1C-215ENST00000399637 CLCN1P35523 988 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 TRAPPC3LQ5T215 181 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 HLTFQ14527 1009 aaKnown RBP eCLIP12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 ARHGEF6Q15052 776 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 CGNQ9P2M7 1197 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 MCM4P33991 863 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 CFAP57Q96MR6 1250 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 CRNKL1Q9BZJ0 848 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 NACA2Q9H009 215 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 EXOC6BQ9Y2D4 811 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 C9orf84Q5VXU9 1444 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 CUL7Q14999 1698 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 SPECC1Q5M775 1068 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 FERMT3Q86UX7 667 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 PPP1R14CQ8TAE6 165 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 IKBKGQ9Y6K9 419 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 SMARCA5O60264 1052 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
CACNA1C-215ENST00000399637 PPP1R12AO14974 1030 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 IFI16Q16666 785 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 GNPATO15228 680 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 KIF4AO95239 1232 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 ACTN2P35609 894 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 FAM47CQ5HY64 1035 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 LDHAL6AQ6ZMR3 332 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 TBC1D5Q92609 795 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 PRDM10Q9NQV6 1147 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 SKIV2LQ15477 1246 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 CCDC87Q9NVE4 849 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 NCKAP5LQ9HCH0 1330 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 DHX29Q7Z478 1369 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 FAM107BQ9H098 131 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 IQSEC3Q9UPP2 1182 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 SPECC1LQ69YQ0 1117 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 MAATS1Q7Z4T9 603 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 ZBTB33Q86T24 672 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 CD109Q6YHK3 1445 aa12.62□□□□□ -0.39
CACNA1C-215ENST00000399637 NBPF1Q3BBV0 1214 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 CCDC184Q52MB2 194 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 CTR9Q6PD62 1173 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 SMARCC2Q8TAQ2 1214 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 H0YIN7 160 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 STX6O43752 255 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 CCDC172P0C7W6 258 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 SMCR8Q8TEV9 937 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 TTC12Q9H892 705 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 GINS2Q9Y248 185 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 DAPK1P53355 1430 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 ATP5J2-PTCD1G3V325 749 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 M0QZ92 97 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 FAM184BQ9ULE4 1060 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 CFAP43Q8NDM7 1665 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 POLA1P09884 1462 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 TAF7Q15545 349 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 CCDC144CPQ8IYA2 1237 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 ZGPATQ8N5A5 531 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 SPC25Q9HBM1 224 aa12.61□□□□□ -0.39
CACNA1C-215ENST00000399637 CALM1P0DP23 149 aa12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 CALM2P0DP24 149 aa12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 CALM3P0DP25 149 aa12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 MCM10Q7L590 875 aa12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 USP21Q9UK80 565 aa12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 TBCAO75347 108 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 RAB3IL1Q8TBN0 382 aa12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 CWC25Q9NXE8 425 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
CACNA1C-215ENST00000399637 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms