RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 MYH16Q9H6N6 1097 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 CWC25Q9NXE8 425 aaPredicted RBP19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 MAP3K2Q9Y2U5 619 aa19.09■□□□□ 0.65
SMIM11A-203ENST00000399299 ZNF521Q96K83 1311 aa19.08■□□□□ 0.65
SMIM11A-203ENST00000399299 TCERG1O14776 1098 aaKnown RBP19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 VAMP4O75379 141 aa19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 SLC4A2P04920 1241 aa19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 APLP1P51693 650 aa19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 EXOSC9Q06265 439 aaKnown RBP19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 SLC51AQ86UW1 340 aa19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 RTFDC1Q9BY42 306 aaPredicted RBP19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 SPINK5Q9NQ38 1064 aaPredicted RBP19.08■□□□□ 0.64
SMIM11A-203ENST00000399299 ZNF541Q9H0D2 1346 aa19.07■□□□□ 0.64
SMIM11A-203ENST00000399299 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
SMIM11A-203ENST00000399299 G2E3Q7L622 706 aa19.07■□□□□ 0.64
SMIM11A-203ENST00000399299 SUPT20HQ8NEM7 779 aa19.07■□□□□ 0.64
SMIM11A-203ENST00000399299 IQCA1LA6NCM1 817 aa19.06■□□□□ 0.64
SMIM11A-203ENST00000399299 NEXNQ0ZGT2 675 aa19.06■□□□□ 0.64
SMIM11A-203ENST00000399299 FLIIQ13045 1269 aa19.06■□□□□ 0.64
SMIM11A-203ENST00000399299 LARGE2Q8N3Y3 721 aa19.06■□□□□ 0.64
SMIM11A-203ENST00000399299 MYH3P11055 1940 aa19.06■□□□□ 0.64
SMIM11A-203ENST00000399299 CDHR2Q9BYE9 1310 aa19.05■□□□□ 0.64
SMIM11A-203ENST00000399299 IGKV5-2P06315 115 aa19.05■□□□□ 0.64
SMIM11A-203ENST00000399299 DPP8Q6V1X1 898 aaPredicted RBP19.05■□□□□ 0.64
SMIM11A-203ENST00000399299 GPC2Q8N158 579 aa19.05■□□□□ 0.64
SMIM11A-203ENST00000399299 MPNDQ8N594 471 aa19.05■□□□□ 0.64
SMIM11A-203ENST00000399299 DUOX1Q9NRD9 1551 aa19.05■□□□□ 0.64
SMIM11A-203ENST00000399299 LTBP1Q14766 1721 aa19.04■□□□□ 0.64
SMIM11A-203ENST00000399299 COL4A1P02462 1669 aa19.04■□□□□ 0.64
SMIM11A-203ENST00000399299 PPIP5K2O43314 1243 aa19.03■□□□□ 0.64
SMIM11A-203ENST00000399299 PDE8AO60658 829 aa19.03■□□□□ 0.64
SMIM11A-203ENST00000399299 EIF6P56537 245 aaKnown RBP19.03■□□□□ 0.64
SMIM11A-203ENST00000399299 CELF1Q92879 486 aaKnown RBP19.03■□□□□ 0.64
SMIM11A-203ENST00000399299 NEURL1BA8MQ27 555 aa19.02■□□□□ 0.64
SMIM11A-203ENST00000399299 CCER2I3L3R5 266 aa19.02■□□□□ 0.64
SMIM11A-203ENST00000399299 FKBP5Q13451 457 aaPredicted RBP19.02■□□□□ 0.64
SMIM11A-203ENST00000399299 CCDC152Q4G0S7 254 aa19.02■□□□□ 0.64
SMIM11A-203ENST00000399299 NIM1KQ8IY84 436 aa19.02■□□□□ 0.64
SMIM11A-203ENST00000399299 RPS8P62241 208 aaKnown RBP19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 KIAA2012Q0VF49 1180 aa19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 AOC3Q16853 763 aa19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 CWF19L2Q2TBE0 894 aaKnown RBP19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 DNAAF4Q8WXU2 420 aa19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 TAF1DQ9H5J8 278 aaPredicted RBP19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 ADAMTSL1Q8N6G6 1762 aa19.01■□□□□ 0.63
SMIM11A-203ENST00000399299 CHADLQ6NUI6 762 aa18.99■□□□□ 0.63
SMIM11A-203ENST00000399299 LDHDQ86WU2 507 aa18.99■□□□□ 0.63
SMIM11A-203ENST00000399299 LINS1Q8NG48 757 aa18.99■□□□□ 0.63
SMIM11A-203ENST00000399299 JARID2Q92833 1246 aaPredicted RBP18.99■□□□□ 0.63
SMIM11A-203ENST00000399299 ZNRF3Q9ULT6 936 aa18.99■□□□□ 0.63
SMIM11A-203ENST00000399299 RTL9Q8NET4 1388 aa18.98■□□□□ 0.63
SMIM11A-203ENST00000399299 H7C1W4 665 aa18.98■□□□□ 0.63
SMIM11A-203ENST00000399299 CTSWP56202 376 aa18.98■□□□□ 0.63
SMIM11A-203ENST00000399299 GCKRQ14397 625 aa18.98■□□□□ 0.63
SMIM11A-203ENST00000399299 SEC31BQ9NQW1 1179 aa18.98■□□□□ 0.63
SMIM11A-203ENST00000399299 E9PSI1 815 aa18.97■□□□□ 0.63
SMIM11A-203ENST00000399299 POTEIP0CG38 1075 aa18.97■□□□□ 0.63
SMIM11A-203ENST00000399299 POTEJP0CG39 1038 aa18.97■□□□□ 0.63
SMIM11A-203ENST00000399299 EPHX2P34913 555 aa18.97■□□□□ 0.63
SMIM11A-203ENST00000399299 PNMA8AQ86V59 439 aaPredicted RBP18.97■□□□□ 0.63
SMIM11A-203ENST00000399299 NSFL1CQ9UNZ2 370 aaKnown RBP18.97■□□□□ 0.63
SMIM11A-203ENST00000399299 GJA3Q9Y6H8 435 aa18.97■□□□□ 0.63
SMIM11A-203ENST00000399299 UBE3BQ7Z3V4 1068 aa18.96■□□□□ 0.63
SMIM11A-203ENST00000399299 DNAJC5GQ8N7S2 189 aa18.96■□□□□ 0.63
SMIM11A-203ENST00000399299 PLA2G12BQ9BX93 195 aa18.96■□□□□ 0.63
SMIM11A-203ENST00000399299 PODXL2Q9NZ53 605 aa18.96■□□□□ 0.63
SMIM11A-203ENST00000399299 LMOD1P29536 600 aaPredicted RBP18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 SCNN1DP51172 638 aa18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 CASP7P55210 303 aa18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 GPSM2P81274 684 aa18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 CXCL9Q07325 125 aa18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 WASHC4Q2M389 1173 aa18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 TTLL11Q8NHH1 800 aa18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 CDC5LQ99459 802 aaKnown RBP18.95■□□□□ 0.62
SMIM11A-203ENST00000399299 ANKRD18AQ8IVF6 992 aa18.94■□□□□ 0.62
SMIM11A-203ENST00000399299 EYA3Q99504 573 aa18.94■□□□□ 0.62
SMIM11A-203ENST00000399299 POLLQ9UGP5 575 aa18.94■□□□□ 0.62
SMIM11A-203ENST00000399299 SPEF2Q9C093 1822 aa18.94■□□□□ 0.62
SMIM11A-203ENST00000399299 C6orf229H3BNL8 230 aa18.93■□□□□ 0.62
SMIM11A-203ENST00000399299 SLFN5Q08AF3 891 aa18.93■□□□□ 0.62
SMIM11A-203ENST00000399299 EAPPQ56P03 285 aaPredicted RBP18.93■□□□□ 0.62
SMIM11A-203ENST00000399299 BEND3Q5T5X7 828 aa18.93■□□□□ 0.62
SMIM11A-203ENST00000399299 CIAPIN1Q6FI81 312 aa18.93■□□□□ 0.62
SMIM11A-203ENST00000399299 TBC1D16Q8TBP0 767 aa18.93■□□□□ 0.62
SMIM11A-203ENST00000399299 CCDC85AQ96PX6 553 aaPredicted RBP18.93■□□□□ 0.62
SMIM11A-203ENST00000399299 F6X3S4 739 aa18.92■□□□□ 0.62
SMIM11A-203ENST00000399299 TNIP1Q15025 636 aa18.92■□□□□ 0.62
SMIM11A-203ENST00000399299 GREM2Q9H772 168 aa18.92■□□□□ 0.62
SMIM11A-203ENST00000399299 YDJCA8MPS7 323 aa18.91■□□□□ 0.62
SMIM11A-203ENST00000399299 HTRA3P83110 453 aa18.91■□□□□ 0.62
SMIM11A-203ENST00000399299 BSDC1Q9NW68 430 aaPredicted RBP18.91■□□□□ 0.62
SMIM11A-203ENST00000399299 GPRC5DQ9NZD1 345 aa18.91■□□□□ 0.62
SMIM11A-203ENST00000399299 ANKIB1Q9P2G1 1089 aa18.91■□□□□ 0.62
SMIM11A-203ENST00000399299 XDHP47989 1333 aa18.91■□□□□ 0.62
SMIM11A-203ENST00000399299 PASKQ96RG2 1323 aa18.91■□□□□ 0.62
SMIM11A-203ENST00000399299 UFL1O94874 794 aa18.9■□□□□ 0.62
SMIM11A-203ENST00000399299 CSF1RP07333 972 aa18.9■□□□□ 0.62
SMIM11A-203ENST00000399299 EPS15P42566 896 aa18.9■□□□□ 0.62
SMIM11A-203ENST00000399299 USP50Q70EL3 339 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms