RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 GCKRQ14397 625 aa18.47■□□□□ 0.55
COL13A1-204ENST00000398975 DDX46Q7L014 1031 aaKnown RBP18.47■□□□□ 0.55
COL13A1-204ENST00000398975 RTKN2Q8IZC4 609 aa18.47■□□□□ 0.55
COL13A1-204ENST00000398975 GRAPLQ8TC17 118 aaPredicted RBP18.47■□□□□ 0.55
COL13A1-204ENST00000398975 CELF1Q92879 486 aaKnown RBP18.47■□□□□ 0.55
COL13A1-204ENST00000398975 BEND3Q5T5X7 828 aa18.46■□□□□ 0.55
COL13A1-204ENST00000398975 LINS1Q8NG48 757 aa18.46■□□□□ 0.55
COL13A1-204ENST00000398975 BCL2L13Q9BXK5 485 aa18.46■□□□□ 0.55
COL13A1-204ENST00000398975 SEC31BQ9NQW1 1179 aa18.46■□□□□ 0.55
COL13A1-204ENST00000398975 MYH3P11055 1940 aa18.46■□□□□ 0.55
COL13A1-204ENST00000398975 DUOX1Q9NRD9 1551 aa18.46■□□□□ 0.55
COL13A1-204ENST00000398975 ZC3H4Q9UPT8 1303 aaKnown RBP18.46■□□□□ 0.55
COL13A1-204ENST00000398975 PDE8AO60658 829 aa18.45■□□□□ 0.54
COL13A1-204ENST00000398975 BBOX1O75936 387 aa18.45■□□□□ 0.54
COL13A1-204ENST00000398975 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.54
COL13A1-204ENST00000398975 CC2D2BQ6DHV5 1058 aa18.45■□□□□ 0.54
COL13A1-204ENST00000398975 UBE3BQ7Z3V4 1068 aa18.45■□□□□ 0.54
COL13A1-204ENST00000398975 CCDC85AQ96PX6 553 aaPredicted RBP18.45■□□□□ 0.54
COL13A1-204ENST00000398975 PSMD1Q99460 953 aa18.45■□□□□ 0.54
COL13A1-204ENST00000398975 LTBP1Q14766 1721 aa18.44■□□□□ 0.54
COL13A1-204ENST00000398975 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
COL13A1-204ENST00000398975 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
COL13A1-204ENST00000398975 GLTPD2A6NH11 291 aa18.42■□□□□ 0.54
COL13A1-204ENST00000398975 CTSWP56202 376 aa18.42■□□□□ 0.54
COL13A1-204ENST00000398975 TTLL11Q8NHH1 800 aa18.42■□□□□ 0.54
COL13A1-204ENST00000398975 SPEF2Q9C093 1822 aa18.42■□□□□ 0.54
COL13A1-204ENST00000398975 POTECB2RU33 542 aa18.41■□□□□ 0.54
COL13A1-204ENST00000398975 RTFDC1Q9BY42 306 aaPredicted RBP18.41■□□□□ 0.54
COL13A1-204ENST00000398975 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
COL13A1-204ENST00000398975 WDR90Q96KV7 1748 aa18.4■□□□□ 0.54
COL13A1-204ENST00000398975 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
COL13A1-204ENST00000398975 ALDH1L2Q3SY69 923 aa18.4■□□□□ 0.54
COL13A1-204ENST00000398975 CCDC152Q4G0S7 254 aa18.4■□□□□ 0.54
COL13A1-204ENST00000398975 SLC4A10Q6U841 1118 aa18.4■□□□□ 0.54
COL13A1-204ENST00000398975 PLA2G12BQ9BX93 195 aa18.4■□□□□ 0.54
COL13A1-204ENST00000398975 GREM2Q9H772 168 aa18.4■□□□□ 0.54
COL13A1-204ENST00000398975 RRAGCQ9HB90 399 aa18.4■□□□□ 0.54
COL13A1-204ENST00000398975 DDNO94850 711 aaPredicted RBP18.39■□□□□ 0.53
COL13A1-204ENST00000398975 C1QTNF8P60827 252 aa18.39■□□□□ 0.53
COL13A1-204ENST00000398975 MPNDQ8N594 471 aa18.39■□□□□ 0.53
COL13A1-204ENST00000398975 SMC4Q9NTJ3 1288 aa18.39■□□□□ 0.53
COL13A1-204ENST00000398975 KDM2BQ8NHM5 1336 aa18.39■□□□□ 0.53
COL13A1-204ENST00000398975 RTL9Q8NET4 1388 aa18.39■□□□□ 0.53
COL13A1-204ENST00000398975 HSP90B1P14625 803 aaKnown RBP18.38■□□□□ 0.53
COL13A1-204ENST00000398975 RARSP54136 660 aaKnown RBP18.38■□□□□ 0.53
COL13A1-204ENST00000398975 GPSM2P81274 684 aa18.38■□□□□ 0.53
COL13A1-204ENST00000398975 FOXO4P98177 505 aa18.38■□□□□ 0.53
COL13A1-204ENST00000398975 GRIPAP1Q4V328 841 aa18.38■□□□□ 0.53
COL13A1-204ENST00000398975 EPHA10Q5JZY3 1008 aa18.38■□□□□ 0.53
COL13A1-204ENST00000398975 DPP8Q6V1X1 898 aaPredicted RBP18.38■□□□□ 0.53
COL13A1-204ENST00000398975 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
COL13A1-204ENST00000398975 FZD9O00144 591 aa18.37■□□□□ 0.53
COL13A1-204ENST00000398975 ALDH1L1O75891 902 aa18.37■□□□□ 0.53
COL13A1-204ENST00000398975 CSF1RP07333 972 aa18.37■□□□□ 0.53
COL13A1-204ENST00000398975 CT47B1P0C2W7 299 aaPredicted RBP18.37■□□□□ 0.53
COL13A1-204ENST00000398975 AOC3Q16853 763 aa18.37■□□□□ 0.53
COL13A1-204ENST00000398975 SRCIN1Q9C0H9 1055 aa18.37■□□□□ 0.53
COL13A1-204ENST00000398975 PTPRCP08575 1304 aa18.37■□□□□ 0.53
COL13A1-204ENST00000398975 GRM8O00222 908 aa18.36■□□□□ 0.53
COL13A1-204ENST00000398975 FAM161AQ3B820 660 aa18.36■□□□□ 0.53
COL13A1-204ENST00000398975 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
COL13A1-204ENST00000398975 KAZALD1Q96I82 304 aa18.36■□□□□ 0.53
COL13A1-204ENST00000398975 GPR101Q96P66 508 aaPredicted RBP18.36■□□□□ 0.53
COL13A1-204ENST00000398975 POLLQ9UGP5 575 aa18.36■□□□□ 0.53
COL13A1-204ENST00000398975 WTIPA6NIX2 430 aaPredicted RBP18.35■□□□□ 0.53
COL13A1-204ENST00000398975 PPIP5K2O43314 1243 aa18.35■□□□□ 0.53
COL13A1-204ENST00000398975 BRPF1P55201 1214 aaPredicted RBP18.35■□□□□ 0.53
COL13A1-204ENST00000398975 NOB1Q9ULX3 412 aaKnown RBP18.35■□□□□ 0.53
COL13A1-204ENST00000398975 NSFL1CQ9UNZ2 370 aaKnown RBP18.35■□□□□ 0.53
COL13A1-204ENST00000398975 ZBED9Q6R2W3 1325 aa18.34■□□□□ 0.53
COL13A1-204ENST00000398975 NBPF7P0C2Y1 421 aaPredicted RBP18.34■□□□□ 0.53
COL13A1-204ENST00000398975 TMX4Q9H1E5 349 aaPredicted RBP18.34■□□□□ 0.53
COL13A1-204ENST00000398975 UTYO14607 1347 aa18.33■□□□□ 0.53
COL13A1-204ENST00000398975 ITGA6P23229 1130 aa18.33■□□□□ 0.52
COL13A1-204ENST00000398975 KIAA2012Q0VF49 1180 aa18.33■□□□□ 0.52
COL13A1-204ENST00000398975 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
COL13A1-204ENST00000398975 ANKRD18AQ8IVF6 992 aa18.33■□□□□ 0.52
COL13A1-204ENST00000398975 SUCLG2Q96I99 432 aa18.33■□□□□ 0.52
COL13A1-204ENST00000398975 VEGFAP15692 232 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-204ENST00000398975 SUPT20HQ8NEM7 779 aa18.32■□□□□ 0.52
COL13A1-204ENST00000398975 TBC1D16Q8TBP0 767 aa18.32■□□□□ 0.52
COL13A1-204ENST00000398975 JDP2Q8WYK2 163 aa18.32■□□□□ 0.52
COL13A1-204ENST00000398975 L3MBTL3Q96JM7 780 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-204ENST00000398975 PODXL2Q9NZ53 605 aa18.32■□□□□ 0.52
COL13A1-204ENST00000398975 C9orf78Q9NZ63 289 aaPredicted RBP18.32■□□□□ 0.52
COL13A1-204ENST00000398975 YDJCA8MPS7 323 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 BCAR3O75815 825 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 TOMM70O94826 608 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 LMBR1LQ6UX01 489 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 NIM1KQ8IY84 436 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 CDC5LQ99459 802 aaKnown RBP18.31■□□□□ 0.52
COL13A1-204ENST00000398975 USP44Q9H0E7 712 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 VPS33BQ9H267 617 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 A0A1B0GUL6 1792 aa18.31■□□□□ 0.52
COL13A1-204ENST00000398975 C6orf229H3BNL8 230 aa18.3■□□□□ 0.52
COL13A1-204ENST00000398975 BSDC1Q9NW68 430 aaPredicted RBP18.3■□□□□ 0.52
COL13A1-204ENST00000398975 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
COL13A1-204ENST00000398975 SCN4AP35499 1836 aa18.3■□□□□ 0.52
COL13A1-204ENST00000398975 RIMBP2O15034 1052 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms