RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SNRKQ9NRH2 765 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 TAF3Q5VWG9 929 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 CCDC144CPQ8IYA2 1237 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 TTC16Q8NEE8 873 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
PCDHA11-201ENST00000398640 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 SAMM50Q9Y512 469 aa16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 CCDC112Q8NEF3 446 aa16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 SLC12A7Q9Y666 1083 aa16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 EPB41L2O43491 1005 aaKnown RBP16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 UQCRFS1P1P0C7P4 283 aa16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 POTEJP0CG39 1038 aa16.52■□□□□ 0.24
PCDHA11-201ENST00000398640 ZNF213O14771 459 aa16.52■□□□□ 0.23
PCDHA11-201ENST00000398640 PPP1R12BO60237 982 aaPredicted RBP16.52■□□□□ 0.23
PCDHA11-201ENST00000398640 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.23
PCDHA11-201ENST00000398640 RIMBP2O15034 1052 aa16.52■□□□□ 0.23
PCDHA11-201ENST00000398640 IRS4O14654 1257 aaPredicted RBP16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 NKTRP30414 1462 aaKnown RBP16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 KSR2Q6VAB6 950 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 TAF4BQ92750 862 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 ANKRD2Q9GZV1 360 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 TMX1Q9H3N1 280 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 SHROOM2Q13796 1616 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 ARAP3Q8WWN8 1544 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 TRIM37O94972 964 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 CALRP27797 417 aaKnown RBP16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 GBP2P32456 591 aaPredicted RBP16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 NLRP5P59047 1200 aa16.51■□□□□ 0.23
PCDHA11-201ENST00000398640 SYCE3A1L190 88 aa16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 PICALMQ13492 652 aa16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 ABCC3O15438 1527 aa16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 IFIT3O14879 490 aaKnown RBP16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 IQSEC3Q9UPP2 1182 aaPredicted RBP16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 PPFIA3O75145 1194 aa16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 EIF6P56537 245 aaKnown RBP16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 ZNF397Q8NF99 534 aaPredicted RBP16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 VEZTQ9HBM0 779 aa16.5■□□□□ 0.23
PCDHA11-201ENST00000398640 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 JAKMIP3Q5VZ66 844 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 PLXNC1O60486 1568 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 GOLIM4O00461 696 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 GCC2Q8IWJ2 1684 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
PCDHA11-201ENST00000398640 DNA2P51530 1060 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 CCT2P78371 535 aaKnown RBP16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 MSL1Q68DK7 614 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 CATIPQ7Z7H3 387 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 CCDC150Q8NCX0 1101 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 TESK2Q96S53 571 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 TMEM266Q2M3C6 531 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 ALDH1L1O75891 902 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 PLS1Q14651 629 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 ARHGAP29Q52LW3 1261 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 ZNF790Q6PG37 636 aa16.48■□□□□ 0.23
PCDHA11-201ENST00000398640 C8orf76Q96K31 380 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 TSG101Q99816 390 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 KIAA0232Q92628 1395 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 RAB11FIP4Q86YS3 637 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 TSHZ3Q63HK5 1081 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 SUPT20HQ8NEM7 779 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 CCDC194A0A1B0GVG4 234 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 ERVV-2B6SEH9 535 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 ERLIN1O75477 346 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 MTERF4Q7Z6M4 381 aaKnown RBP16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 AFF2P51816 1311 aa16.47■□□□□ 0.23
PCDHA11-201ENST00000398640 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 BRINP3Q76B58 766 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 CACNA2D4Q7Z3S7 1137 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 RNF41Q9H4P4 317 aaPredicted RBP16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 MAP3K4Q9Y6R4 1608 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 UQCRHLA0A096LP55 91 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 KIAA0754O94854 1291 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 UQCRHP07919 91 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 SEPT12Q8IYM1 358 aa16.46■□□□□ 0.23
PCDHA11-201ENST00000398640 GRM8O00222 908 aa16.46■□□□□ 0.22
PCDHA11-201ENST00000398640 TNNT1P13805 278 aa16.46■□□□□ 0.22
PCDHA11-201ENST00000398640 ANAPC15P60006 121 aa16.46■□□□□ 0.22
PCDHA11-201ENST00000398640 HAND2P61296 217 aa16.46■□□□□ 0.22
PCDHA11-201ENST00000398640 CCDC102AQ96A19 550 aa16.46■□□□□ 0.22
PCDHA11-201ENST00000398640 KIF1BO60333 1816 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 BAG4O95429 457 aaKnown RBP16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 MPHOSPH6Q99547 160 aaKnown RBP16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 POLR3AO14802 1390 aaPredicted RBP16.45■□□□□ 0.22
PCDHA11-201ENST00000398640 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms