RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 MAP1SQ66K74 1059 aaPredicted RBP8.93□□□□□ -0.98
SUMO3-202ENST00000397893 PNMA8AQ86V59 439 aaPredicted RBP8.93□□□□□ -0.98
SUMO3-202ENST00000397893 CNTROBQ8N137 903 aa8.93□□□□□ -0.98
SUMO3-202ENST00000397893 LARGE2Q8N3Y3 721 aa8.93□□□□□ -0.98
SUMO3-202ENST00000397893 JDP2Q8WYK2 163 aa8.93□□□□□ -0.98
SUMO3-202ENST00000397893 VPS33BQ9H267 617 aa8.93□□□□□ -0.98
SUMO3-202ENST00000397893 CHPF2Q9P2E5 772 aa8.93□□□□□ -0.98
SUMO3-202ENST00000397893 SCN4AP35499 1836 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 TMEM88BA6NKF7 163 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 TCERG1O14776 1098 aaKnown RBP8.92□□□□□ -0.98
SUMO3-202ENST00000397893 VEGFBP49765 207 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 CXCL9Q07325 125 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 TRIM28Q13263 835 aaKnown RBP8.92□□□□□ -0.98
SUMO3-202ENST00000397893 EAPPQ56P03 285 aaPredicted RBP8.92□□□□□ -0.98
SUMO3-202ENST00000397893 DUSP27Q5VZP5 1158 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 SP8Q8IXZ3 490 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 PLBD2Q8NHP8 589 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 CFAP44Q96MT7 982 aa8.92□□□□□ -0.98
SUMO3-202ENST00000397893 TRMT112Q9UI30 125 aaKnown RBP8.92□□□□□ -0.98
SUMO3-202ENST00000397893 LTBP1Q14766 1721 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 SH3TC1Q8TE82 1336 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 RASSF10A6NK89 507 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 EIF6P56537 245 aaKnown RBP8.91□□□□□ -0.98
SUMO3-202ENST00000397893 FMR1Q06787 632 aaKnown RBP eCLIP8.91□□□□□ -0.98
SUMO3-202ENST00000397893 SF3B3Q15393 1217 aaKnown RBP8.91□□□□□ -0.98
SUMO3-202ENST00000397893 AOC3Q16853 763 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 HDGFL1Q5TGJ6 251 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 ANKRD13DQ6ZTN6 518 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 BCL11AQ9H165 835 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 MBIPQ9NS73 344 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 PGAP2Q9UHJ9 254 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 ZNRF3Q9ULT6 936 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 GJA3Q9Y6H8 435 aa8.91□□□□□ -0.98
SUMO3-202ENST00000397893 APAF1O14727 1248 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 FOXN1O15353 648 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 PPIP5K2O43314 1243 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 KIAA2012Q0VF49 1180 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 GRAPQ13588 217 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 WDR43Q15061 677 aaKnown RBP eCLIP8.9□□□□□ -0.98
SUMO3-202ENST00000397893 B4GALNT3Q6L9W6 998 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 USP50Q70EL3 339 aaPredicted RBP8.9□□□□□ -0.98
SUMO3-202ENST00000397893 NIM1KQ8IY84 436 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 GRAPLQ8TC17 118 aaPredicted RBP8.9□□□□□ -0.98
SUMO3-202ENST00000397893 ZNF428Q96B54 188 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 WBP1LQ9NX94 342 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 GPRC5DQ9NZD1 345 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 DBF4Q9UBU7 674 aaPredicted RBP8.9□□□□□ -0.98
SUMO3-202ENST00000397893 CLEC11AQ9Y240 323 aa8.9□□□□□ -0.98
SUMO3-202ENST00000397893 LAS1LQ9Y4W2 734 aaKnown RBP8.9□□□□□ -0.98
SUMO3-202ENST00000397893 YDJCA8MPS7 323 aa8.89□□□□□ -0.99
SUMO3-202ENST00000397893 ATP5J2-PTCD1G3V325 749 aa8.89□□□□□ -0.99
SUMO3-202ENST00000397893 GMPSP49915 693 aaPredicted RBP8.89□□□□□ -0.99
SUMO3-202ENST00000397893 HIRAP54198 1017 aaPredicted RBP8.89□□□□□ -0.99
SUMO3-202ENST00000397893 CST9Q5W186 159 aa8.89□□□□□ -0.99
SUMO3-202ENST00000397893 DPP8Q6V1X1 898 aaPredicted RBP8.89□□□□□ -0.99
SUMO3-202ENST00000397893 DDX46Q7L014 1031 aaKnown RBP8.89□□□□□ -0.99
SUMO3-202ENST00000397893 TNS4Q8IZW8 715 aa8.89□□□□□ -0.99
SUMO3-202ENST00000397893 MPNDQ8N594 471 aa8.89□□□□□ -0.99
SUMO3-202ENST00000397893 SUPT20HQ8NEM7 779 aa8.89□□□□□ -0.99
SUMO3-202ENST00000397893 CELF1Q92879 486 aaKnown RBP8.89□□□□□ -0.99
SUMO3-202ENST00000397893 HYPKQ9NX55 129 aa8.89□□□□□ -0.99
SUMO3-202ENST00000397893 TRAF5O00463 557 aa8.88□□□□□ -0.99
SUMO3-202ENST00000397893 LMOD1P29536 600 aaPredicted RBP8.88□□□□□ -0.99
SUMO3-202ENST00000397893 TMC4Q7Z404 712 aa8.88□□□□□ -0.99
SUMO3-202ENST00000397893 C8orf58Q8NAV2 365 aa8.88□□□□□ -0.99
SUMO3-202ENST00000397893 FAM89AQ96GI7 184 aa8.88□□□□□ -0.99
SUMO3-202ENST00000397893 PRDM10Q9NQV6 1147 aa8.88□□□□□ -0.99
SUMO3-202ENST00000397893 ADARB2Q9NS39 739 aaKnown RBP8.88□□□□□ -0.99
SUMO3-202ENST00000397893 IFT57Q9NWB7 429 aa8.88□□□□□ -0.99
SUMO3-202ENST00000397893 COL4A1P02462 1669 aa8.88□□□□□ -0.99
SUMO3-202ENST00000397893 DUOX1Q9NRD9 1551 aa8.87□□□□□ -0.99
SUMO3-202ENST00000397893 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
SUMO3-202ENST00000397893 SHTN1A0MZ66 631 aa8.87□□□□□ -0.99
SUMO3-202ENST00000397893 RAD17O75943 681 aa8.87□□□□□ -0.99
SUMO3-202ENST00000397893 DEFB115Q30KQ5 88 aa8.87□□□□□ -0.99
SUMO3-202ENST00000397893 CIAPIN1Q6FI81 312 aa8.87□□□□□ -0.99
SUMO3-202ENST00000397893 CCDC136Q96JN2 1154 aa8.87□□□□□ -0.99
SUMO3-202ENST00000397893 PHAXQ9H814 394 aaKnown RBP8.87□□□□□ -0.99
SUMO3-202ENST00000397893 POLLQ9UGP5 575 aa8.87□□□□□ -0.99
SUMO3-202ENST00000397893 IRS4O14654 1257 aaPredicted RBP8.86□□□□□ -0.99
SUMO3-202ENST00000397893 ANP32AP39687 249 aaKnown RBP8.86□□□□□ -0.99
SUMO3-202ENST00000397893 RPS8P62241 208 aaKnown RBP8.86□□□□□ -0.99
SUMO3-202ENST00000397893 GNAI1P63096 354 aa8.86□□□□□ -0.99
SUMO3-202ENST00000397893 GPSM2P81274 684 aa8.86□□□□□ -0.99
SUMO3-202ENST00000397893 TSPYL6Q8N831 410 aa8.86□□□□□ -0.99
SUMO3-202ENST00000397893 ZBTB38Q8NAP3 1195 aaPredicted RBP8.86□□□□□ -0.99
SUMO3-202ENST00000397893 TRPM4Q8TD43 1214 aa8.86□□□□□ -0.99
SUMO3-202ENST00000397893 TMX4Q9H1E5 349 aaPredicted RBP8.86□□□□□ -0.99
SUMO3-202ENST00000397893 TLL2Q9Y6L7 1015 aa8.86□□□□□ -0.99
SUMO3-202ENST00000397893 U3KPZ7 1027 aaPredicted RBP8.86□□□□□ -0.99
SUMO3-202ENST00000397893 CDHR2Q9BYE9 1310 aa8.85□□□□□ -0.99
SUMO3-202ENST00000397893 ELL2O00472 640 aaPredicted RBP8.85□□□□□ -0.99
SUMO3-202ENST00000397893 HSPA8P11142 646 aaKnown RBP8.85□□□□□ -0.99
SUMO3-202ENST00000397893 CTCFP49711 727 aaPredicted RBP8.85□□□□□ -0.99
SUMO3-202ENST00000397893 TNIP1Q15025 636 aa8.85□□□□□ -0.99
SUMO3-202ENST00000397893 RTL5Q5HYW3 569 aaPredicted RBP8.85□□□□□ -0.99
SUMO3-202ENST00000397893 RIC3Q7Z5B4 369 aa8.85□□□□□ -0.99
SUMO3-202ENST00000397893 ZC3H15Q8WU90 426 aaKnown RBP8.85□□□□□ -0.99
SUMO3-202ENST00000397893 DPF2Q92785 391 aa8.85□□□□□ -0.99
SUMO3-202ENST00000397893 GLIS2Q9BZE0 524 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms