RNA–Protein interactions for RNA: ENST00000397495.8

PPM1F-202, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 2 BASIC

Gene PPM1F, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-202ENST00000397495 AKT1S1Q96B36 256 aa18.85■□□□□ 0.61
PPM1F-202ENST00000397495 CAMKK2Q96RR4 588 aa18.85■□□□□ 0.61
PPM1F-202ENST00000397495 KLHDC4Q8TBB5 520 aa18.84■□□□□ 0.61
PPM1F-202ENST00000397495 SH3TC1Q8TE82 1336 aa18.84■□□□□ 0.61
PPM1F-202ENST00000397495 NTSR2O95665 410 aa18.83■□□□□ 0.61
PPM1F-202ENST00000397495 SETDB2Q96T68 719 aa18.83■□□□□ 0.61
PPM1F-202ENST00000397495 ANTXR1Q9H6X2 564 aa18.83■□□□□ 0.61
PPM1F-202ENST00000397495 OS9Q13438 667 aaPredicted RBP18.83■□□□□ 0.6
PPM1F-202ENST00000397495 NUTM1Q86Y26 1132 aa18.83■□□□□ 0.6
PPM1F-202ENST00000397495 OTUD7AQ8TE49 926 aaPredicted RBP18.83■□□□□ 0.6
PPM1F-202ENST00000397495 CCDC85AQ96PX6 553 aaPredicted RBP18.83■□□□□ 0.6
PPM1F-202ENST00000397495 PLA2G12BQ9BX93 195 aa18.83■□□□□ 0.6
PPM1F-202ENST00000397495 LRRCC1Q9C099 1032 aa18.83■□□□□ 0.6
PPM1F-202ENST00000397495 SIL1Q9H173 461 aa18.83■□□□□ 0.6
PPM1F-202ENST00000397495 STAP2Q9UGK3 403 aa18.83■□□□□ 0.6
PPM1F-202ENST00000397495 RAB11FIP3O75154 756 aa18.82■□□□□ 0.6
PPM1F-202ENST00000397495 PDE1AP54750 535 aa18.82■□□□□ 0.6
PPM1F-202ENST00000397495 DEFB132Q7Z7B7 95 aa18.82■□□□□ 0.6
PPM1F-202ENST00000397495 HCLS1P14317 486 aaPredicted RBP18.81■□□□□ 0.6
PPM1F-202ENST00000397495 RFX5P48382 616 aaPredicted RBP18.81■□□□□ 0.6
PPM1F-202ENST00000397495 HSP90AB4PQ58FF6 505 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 KIF2CQ99661 725 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 DDX60Q8IY21 1712 aaKnown RBP18.81■□□□□ 0.6
PPM1F-202ENST00000397495 AOX1Q06278 1338 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 PDE8AO60658 829 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 GYS1P13807 737 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 SDSP20132 328 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 CTSWP56202 376 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
PPM1F-202ENST00000397495 PTPN12Q05209 780 aaKnown RBP18.8■□□□□ 0.6
PPM1F-202ENST00000397495 G3BP1Q13283 466 aaKnown RBP eCLIP18.8■□□□□ 0.6
PPM1F-202ENST00000397495 NFKBIBQ15653 356 aa18.8■□□□□ 0.6
PPM1F-202ENST00000397495 IL1RAPL2Q9NP60 686 aa18.8■□□□□ 0.6
PPM1F-202ENST00000397495 LAMB2P55268 1798 aa18.79■□□□□ 0.6
PPM1F-202ENST00000397495 CSF1RP07333 972 aa18.79■□□□□ 0.6
PPM1F-202ENST00000397495 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
PPM1F-202ENST00000397495 ERFEQ4G0M1 354 aa18.79■□□□□ 0.6
PPM1F-202ENST00000397495 NBPF5PQ86XG9 351 aaPredicted RBP18.79■□□□□ 0.6
PPM1F-202ENST00000397495 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
PPM1F-202ENST00000397495 TTLL11Q8NHH1 800 aa18.79■□□□□ 0.6
PPM1F-202ENST00000397495 RHPN1Q8TCX5 695 aa18.79■□□□□ 0.6
PPM1F-202ENST00000397495 KIF1BPQ96EK5 621 aa18.79■□□□□ 0.6
PPM1F-202ENST00000397495 COPRSQ9NQ92 184 aa18.79■□□□□ 0.6
PPM1F-202ENST00000397495 NFIXQ14938 502 aa18.78■□□□□ 0.6
PPM1F-202ENST00000397495 CCDC57Q2TAC2 916 aa18.78■□□□□ 0.6
PPM1F-202ENST00000397495 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
PPM1F-202ENST00000397495 ZNF594Q96JF6 807 aaPredicted RBP18.78■□□□□ 0.6
PPM1F-202ENST00000397495 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
PPM1F-202ENST00000397495 SOCS7O14512 581 aa18.77■□□□□ 0.6
PPM1F-202ENST00000397495 GREM2Q9H772 168 aa18.77■□□□□ 0.6
PPM1F-202ENST00000397495 CASZ1Q86V15 1759 aa18.77■□□□□ 0.59
PPM1F-202ENST00000397495 CARMIL3Q8ND23 1372 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 NPHP1O15259 732 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 IFIT5Q13325 482 aaKnown RBP18.76■□□□□ 0.59
PPM1F-202ENST00000397495 ERC1Q8IUD2 1116 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 FLAD1Q8NFF5 587 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 PNPLA7Q6ZV29 1317 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 SASH1O94885 1247 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 HSP90B1P14625 803 aaKnown RBP18.76■□□□□ 0.59
PPM1F-202ENST00000397495 ITGA6P23229 1130 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 SLC15A2Q16348 729 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 CASC1Q6TDU7 716 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 TPTE2Q6XPS3 522 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 CCDC24Q8N4L8 307 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 USP26Q9BXU7 913 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 STK32BQ9NY57 414 aa18.76■□□□□ 0.59
PPM1F-202ENST00000397495 MX1P20591 662 aa18.75■□□□□ 0.59
PPM1F-202ENST00000397495 TAF7LQ5H9L4 462 aa18.75■□□□□ 0.59
PPM1F-202ENST00000397495 ABCC12Q96J65 1359 aa18.74■□□□□ 0.59
PPM1F-202ENST00000397495 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
PPM1F-202ENST00000397495 HSCBQ8IWL3 235 aa18.73■□□□□ 0.59
PPM1F-202ENST00000397495 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.73■□□□□ 0.59
PPM1F-202ENST00000397495 TM4SF1P30408 202 aa18.73■□□□□ 0.59
PPM1F-202ENST00000397495 LRRC24Q50LG9 513 aa18.73■□□□□ 0.59
PPM1F-202ENST00000397495 CLASRPQ8N2M8 674 aaKnown RBP18.73■□□□□ 0.59
PPM1F-202ENST00000397495 PUS3Q9BZE2 481 aaKnown RBP18.73■□□□□ 0.59
PPM1F-202ENST00000397495 EYA2O00167 538 aa18.72■□□□□ 0.59
PPM1F-202ENST00000397495 CCDC152Q4G0S7 254 aa18.72■□□□□ 0.59
PPM1F-202ENST00000397495 C3orf67Q6ZVT6 689 aa18.72■□□□□ 0.59
PPM1F-202ENST00000397495 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
PPM1F-202ENST00000397495 CNBD1Q8NA66 436 aa18.72■□□□□ 0.59
PPM1F-202ENST00000397495 EPB41L2O43491 1005 aaKnown RBP18.71■□□□□ 0.59
PPM1F-202ENST00000397495 REC8O95072 547 aa18.71■□□□□ 0.59
PPM1F-202ENST00000397495 DDIT3P35638 169 aa18.71■□□□□ 0.59
PPM1F-202ENST00000397495 TFCP2Q12800 502 aa18.71■□□□□ 0.59
PPM1F-202ENST00000397495 SLC10A5Q5PT55 438 aa18.71■□□□□ 0.59
PPM1F-202ENST00000397495 SEC31BQ9NQW1 1179 aa18.71■□□□□ 0.59
PPM1F-202ENST00000397495 SERPINB2P05120 415 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 DDR1Q08345 913 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 TSHZ3Q63HK5 1081 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 NLGN1Q8N2Q7 840 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 SPEF2Q9C093 1822 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 QSER1Q2KHR3 1735 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 ERC2O15083 957 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 IL15P40933 162 aaPredicted RBP18.7■□□□□ 0.58
PPM1F-202ENST00000397495 MSL1Q68DK7 614 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 AACSQ86V21 672 aa18.7■□□□□ 0.58
PPM1F-202ENST00000397495 TAF1P21675 1872 aa18.69■□□□□ 0.58
PPM1F-202ENST00000397495 POLRMTO00411 1230 aaKnown RBP18.69■□□□□ 0.58
PPM1F-202ENST00000397495 CIAO1O76071 339 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms