RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 PARP10Q53GL7 1025 aa21.15■□□□□ 0.98
TSPAN4-205ENST00000397406 ARFGEF1Q9Y6D6 1849 aa21.15■□□□□ 0.98
TSPAN4-205ENST00000397406 MTX1Q13505 466 aa21.14■□□□□ 0.98
TSPAN4-205ENST00000397406 SUSD4Q5VX71 490 aa21.14■□□□□ 0.98
TSPAN4-205ENST00000397406 C2CD5Q86YS7 1000 aa21.14■□□□□ 0.98
TSPAN4-205ENST00000397406 ANKRD31Q8N7Z5 1873 aa21.14■□□□□ 0.98
TSPAN4-205ENST00000397406 CDHR2Q9BYE9 1310 aa21.14■□□□□ 0.97
TSPAN4-205ENST00000397406 PNMA6EA0A0J9YXQ4 647 aa21.13■□□□□ 0.97
TSPAN4-205ENST00000397406 EPHA10Q5JZY3 1008 aa21.13■□□□□ 0.97
TSPAN4-205ENST00000397406 C9orf131Q5VYM1 1079 aa21.13■□□□□ 0.97
TSPAN4-205ENST00000397406 BICC1Q9H694 974 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-205ENST00000397406 GPBP1L1Q9HC44 474 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-205ENST00000397406 KIF3CO14782 793 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 RTL5Q5HYW3 569 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 FAM89AQ96GI7 184 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 BRIP1Q9BX63 1249 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 TRMT112Q9UI30 125 aaKnown RBP21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 NTSR2O95665 410 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 RASSF7Q02833 373 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 RABL6Q3YEC7 729 aaPredicted RBP21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 PPP1R42Q7Z4L9 355 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 SSH3Q8TE77 659 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 SETDB2Q96T68 719 aa21.12■□□□□ 0.97
TSPAN4-205ENST00000397406 HMMRO75330 724 aa21.11■□□□□ 0.97
TSPAN4-205ENST00000397406 FOXO4P98177 505 aa21.11■□□□□ 0.97
TSPAN4-205ENST00000397406 POLA2Q14181 598 aa21.11■□□□□ 0.97
TSPAN4-205ENST00000397406 SMC5Q8IY18 1101 aa21.11■□□□□ 0.97
TSPAN4-205ENST00000397406 SYNE4Q8N205 404 aa21.11■□□□□ 0.97
TSPAN4-205ENST00000397406 UTP14AQ9BVJ6 771 aaKnown RBP21.11■□□□□ 0.97
TSPAN4-205ENST00000397406 DLEC1Q9Y238 1755 aa21.11■□□□□ 0.97
TSPAN4-205ENST00000397406 TTLL6Q8N841 843 aa21.1■□□□□ 0.97
TSPAN4-205ENST00000397406 PLA2G12BQ9BX93 195 aa21.1■□□□□ 0.97
TSPAN4-205ENST00000397406 COL11A2P13942 1736 aaPredicted RBP21.1■□□□□ 0.97
TSPAN4-205ENST00000397406 H0YIN7 160 aa21.09■□□□□ 0.97
TSPAN4-205ENST00000397406 SH3TC1Q8TE82 1336 aa21.09■□□□□ 0.97
TSPAN4-205ENST00000397406 FAM177BA6PVY3 158 aa21.08■□□□□ 0.97
TSPAN4-205ENST00000397406 NFKBIEO00221 500 aa21.08■□□□□ 0.97
TSPAN4-205ENST00000397406 SRGAP3O43295 1099 aa21.08■□□□□ 0.97
TSPAN4-205ENST00000397406 CNBD1Q8NA66 436 aa21.08■□□□□ 0.97
TSPAN4-205ENST00000397406 GCC1Q96CN9 775 aa21.08■□□□□ 0.97
TSPAN4-205ENST00000397406 DCTPP1Q9H773 170 aa21.08■□□□□ 0.97
TSPAN4-205ENST00000397406 IRS4O14654 1257 aaPredicted RBP21.07■□□□□ 0.96
TSPAN4-205ENST00000397406 LMBR1LQ6UX01 489 aa21.06■□□□□ 0.96
TSPAN4-205ENST00000397406 NMRK2Q9NPI5 230 aa21.06■□□□□ 0.96
TSPAN4-205ENST00000397406 RNF181Q9P0P0 153 aa21.06■□□□□ 0.96
TSPAN4-205ENST00000397406 SRGNP10124 158 aa21.05■□□□□ 0.96
TSPAN4-205ENST00000397406 PDE6BP35913 854 aa21.05■□□□□ 0.96
TSPAN4-205ENST00000397406 ZNF622Q969S3 477 aaKnown RBP eCLIP21.05■□□□□ 0.96
TSPAN4-205ENST00000397406 NYXQ9GZU5 481 aa21.05■□□□□ 0.96
TSPAN4-205ENST00000397406 KLRG2A4D1S0 409 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-205ENST00000397406 PDE8AO60658 829 aa21.04■□□□□ 0.96
TSPAN4-205ENST00000397406 CSF1RP07333 972 aa21.04■□□□□ 0.96
TSPAN4-205ENST00000397406 NBPF5PQ86XG9 351 aaPredicted RBP21.04■□□□□ 0.96
TSPAN4-205ENST00000397406 NUTM1Q86Y26 1132 aa21.04■□□□□ 0.96
TSPAN4-205ENST00000397406 ERFEQ4G0M1 354 aa21.04■□□□□ 0.96
TSPAN4-205ENST00000397406 ABCC12Q96J65 1359 aa21.03■□□□□ 0.96
TSPAN4-205ENST00000397406 C21orf2O43822 256 aa21.03■□□□□ 0.96
TSPAN4-205ENST00000397406 HCLS1P14317 486 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-205ENST00000397406 RFX5P48382 616 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-205ENST00000397406 CTSWP56202 376 aa21.03■□□□□ 0.96
TSPAN4-205ENST00000397406 ZNF219Q9P2Y4 722 aaPredicted RBP21.03■□□□□ 0.96
TSPAN4-205ENST00000397406 TNRC6CQ9HCJ0 1690 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 SBF1O95248 1867 aa21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 ST5P78524 1137 aa21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 SLC10A5Q5PT55 438 aa21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 TTLL11Q8NHH1 800 aa21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 C7orf43Q8WVR3 580 aa21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 PDZRN3Q9UPQ7 1066 aa21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 EXOC6BQ9Y2D4 811 aa21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 NOP58Q9Y2X3 529 aaKnown RBP21.02■□□□□ 0.96
TSPAN4-205ENST00000397406 HSP90B1P14625 803 aaKnown RBP21.01■□□□□ 0.95
TSPAN4-205ENST00000397406 NUCB1Q02818 461 aa21.01■□□□□ 0.95
TSPAN4-205ENST00000397406 STYK1Q6J9G0 422 aa21.01■□□□□ 0.95
TSPAN4-205ENST00000397406 TPTE2Q6XPS3 522 aa21.01■□□□□ 0.95
TSPAN4-205ENST00000397406 PRPF40BQ6NWY9 871 aaKnown RBP21■□□□□ 0.95
TSPAN4-205ENST00000397406 PA2G4Q9UQ80 394 aaKnown RBP21■□□□□ 0.95
TSPAN4-205ENST00000397406 RIC1Q4ADV7 1423 aa21■□□□□ 0.95
TSPAN4-205ENST00000397406 CEP350Q5VT06 3117 aa20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 SURF6O75683 361 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 PTPN12Q05209 780 aaKnown RBP20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 FAM161AQ3B820 660 aa20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 SKAP1Q86WV1 359 aa20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 SLX4Q8IY92 1834 aa20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 MASTLQ96GX5 879 aa20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 COPRSQ9NQ92 184 aa20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 CHMP3Q9Y3E7 222 aa20.99■□□□□ 0.95
TSPAN4-205ENST00000397406 LMNB1P20700 586 aa20.98■□□□□ 0.95
TSPAN4-205ENST00000397406 GTF2E1P29083 439 aaPredicted RBP20.98■□□□□ 0.95
TSPAN4-205ENST00000397406 OLFM4Q6UX06 510 aa20.98■□□□□ 0.95
TSPAN4-205ENST00000397406 KLHDC4Q8TBB5 520 aa20.98■□□□□ 0.95
TSPAN4-205ENST00000397406 SPEF2Q9C093 1822 aa20.98■□□□□ 0.95
TSPAN4-205ENST00000397406 RTL9Q8NET4 1388 aa20.97■□□□□ 0.95
TSPAN4-205ENST00000397406 ANKRD45Q5TZF3 282 aa20.97■□□□□ 0.95
TSPAN4-205ENST00000397406 SLC51AQ86UW1 340 aa20.97■□□□□ 0.95
TSPAN4-205ENST00000397406 GREM2Q9H772 168 aa20.97■□□□□ 0.95
TSPAN4-205ENST00000397406 TAF1P21675 1872 aa20.97■□□□□ 0.95
TSPAN4-205ENST00000397406 NPHP1O15259 732 aa20.96■□□□□ 0.95
TSPAN4-205ENST00000397406 RAB11FIP3O75154 756 aa20.96■□□□□ 0.95
TSPAN4-205ENST00000397406 HSP90AB4PQ58FF6 505 aa20.96■□□□□ 0.95
TSPAN4-205ENST00000397406 C3orf67Q6ZVT6 689 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms