RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 VAMP4O75379 141 aa17.84■□□□□ 0.45
SEC13-204ENST00000397099 PCCAP05165 728 aaPredicted RBP17.84■□□□□ 0.45
SEC13-204ENST00000397099 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
SEC13-204ENST00000397099 MAP3K2Q9Y2U5 619 aa17.84■□□□□ 0.45
SEC13-204ENST00000397099 ZNF541Q9H0D2 1346 aa17.83■□□□□ 0.44
SEC13-204ENST00000397099 PI4KAP2A4QPH2 592 aa17.83■□□□□ 0.44
SEC13-204ENST00000397099 EXOSC9Q06265 439 aaKnown RBP17.83■□□□□ 0.44
SEC13-204ENST00000397099 PI4KAP1Q8N8J0 262 aa17.83■□□□□ 0.44
SEC13-204ENST00000397099 SCN4AP35499 1836 aa17.82■□□□□ 0.44
SEC13-204ENST00000397099 ZNF521Q96K83 1311 aa17.82■□□□□ 0.44
SEC13-204ENST00000397099 FLIIQ13045 1269 aa17.82■□□□□ 0.44
SEC13-204ENST00000397099 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
SEC13-204ENST00000397099 KLRG1Q96E93 195 aa17.82■□□□□ 0.44
SEC13-204ENST00000397099 CDHR2Q9BYE9 1310 aa17.81■□□□□ 0.44
SEC13-204ENST00000397099 E9PSI1 815 aa17.81■□□□□ 0.44
SEC13-204ENST00000397099 CHADLQ6NUI6 762 aa17.81■□□□□ 0.44
SEC13-204ENST00000397099 RTFDC1Q9BY42 306 aaPredicted RBP17.81■□□□□ 0.44
SEC13-204ENST00000397099 FZD9O00144 591 aa17.8■□□□□ 0.44
SEC13-204ENST00000397099 PDE8AO60658 829 aa17.8■□□□□ 0.44
SEC13-204ENST00000397099 FKBP5Q13451 457 aaPredicted RBP17.8■□□□□ 0.44
SEC13-204ENST00000397099 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
SEC13-204ENST00000397099 DPP8Q6V1X1 898 aaPredicted RBP17.8■□□□□ 0.44
SEC13-204ENST00000397099 LARGE2Q8N3Y3 721 aa17.8■□□□□ 0.44
SEC13-204ENST00000397099 MPNDQ8N594 471 aa17.8■□□□□ 0.44
SEC13-204ENST00000397099 L3MBTL3Q96JM7 780 aaPredicted RBP17.8■□□□□ 0.44
SEC13-204ENST00000397099 LRRC37AA6NMS7 1700 aa17.8■□□□□ 0.44
SEC13-204ENST00000397099 MYH3P11055 1940 aa17.8■□□□□ 0.44
SEC13-204ENST00000397099 POTEIP0CG38 1075 aa17.79■□□□□ 0.44
SEC13-204ENST00000397099 POTEJP0CG39 1038 aa17.79■□□□□ 0.44
SEC13-204ENST00000397099 EIF6P56537 245 aaKnown RBP17.79■□□□□ 0.44
SEC13-204ENST00000397099 EAPPQ56P03 285 aaPredicted RBP17.79■□□□□ 0.44
SEC13-204ENST00000397099 SLC51AQ86UW1 340 aa17.79■□□□□ 0.44
SEC13-204ENST00000397099 GPC2Q8N158 579 aa17.79■□□□□ 0.44
SEC13-204ENST00000397099 TAF1DQ9H5J8 278 aaPredicted RBP17.79■□□□□ 0.44
SEC13-204ENST00000397099 HACL1Q9UJ83 578 aa17.79■□□□□ 0.44
SEC13-204ENST00000397099 LDHDQ86WU2 507 aa17.78■□□□□ 0.44
SEC13-204ENST00000397099 DNAAF4Q8WXU2 420 aa17.78■□□□□ 0.44
SEC13-204ENST00000397099 GJA3Q9Y6H8 435 aa17.78■□□□□ 0.44
SEC13-204ENST00000397099 NEURL1BA8MQ27 555 aa17.77■□□□□ 0.44
SEC13-204ENST00000397099 IGKV5-2P06315 115 aa17.77■□□□□ 0.44
SEC13-204ENST00000397099 RPS8P62241 208 aaKnown RBP17.77■□□□□ 0.44
SEC13-204ENST00000397099 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
SEC13-204ENST00000397099 NIM1KQ8IY84 436 aa17.77■□□□□ 0.44
SEC13-204ENST00000397099 LINS1Q8NG48 757 aa17.77■□□□□ 0.44
SEC13-204ENST00000397099 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
SEC13-204ENST00000397099 CLEC11AQ9Y240 323 aa17.77■□□□□ 0.44
SEC13-204ENST00000397099 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
SEC13-204ENST00000397099 EPHX2P34913 555 aa17.76■□□□□ 0.43
SEC13-204ENST00000397099 G2E3Q7L622 706 aa17.76■□□□□ 0.43
SEC13-204ENST00000397099 TAF1P21675 1872 aa17.75■□□□□ 0.43
SEC13-204ENST00000397099 AOC3Q16853 763 aa17.75■□□□□ 0.43
SEC13-204ENST00000397099 H7C1W4 665 aa17.74■□□□□ 0.43
SEC13-204ENST00000397099 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
SEC13-204ENST00000397099 KIAA2012Q0VF49 1180 aa17.74■□□□□ 0.43
SEC13-204ENST00000397099 GCKRQ14397 625 aa17.74■□□□□ 0.43
SEC13-204ENST00000397099 PNMA8AQ86V59 439 aaPredicted RBP17.74■□□□□ 0.43
SEC13-204ENST00000397099 CDC5LQ99459 802 aaKnown RBP17.74■□□□□ 0.43
SEC13-204ENST00000397099 EYA3Q99504 573 aa17.74■□□□□ 0.43
SEC13-204ENST00000397099 RTL9Q8NET4 1388 aa17.74■□□□□ 0.43
SEC13-204ENST00000397099 CTSWP56202 376 aa17.73■□□□□ 0.43
SEC13-204ENST00000397099 JMYQ8N9B5 988 aa17.73■□□□□ 0.43
SEC13-204ENST00000397099 CELF1Q92879 486 aaKnown RBP17.73■□□□□ 0.43
SEC13-204ENST00000397099 PLA2G12BQ9BX93 195 aa17.73■□□□□ 0.43
SEC13-204ENST00000397099 ZNRF3Q9ULT6 936 aa17.73■□□□□ 0.43
SEC13-204ENST00000397099 COL4A5P29400 1685 aa17.73■□□□□ 0.43
SEC13-204ENST00000397099 CT47B1P0C2W7 299 aaPredicted RBP17.72■□□□□ 0.43
SEC13-204ENST00000397099 SLFN5Q08AF3 891 aa17.72■□□□□ 0.43
SEC13-204ENST00000397099 CWF19L2Q2TBE0 894 aaKnown RBP17.72■□□□□ 0.43
SEC13-204ENST00000397099 ANKRD18AQ8IVF6 992 aa17.72■□□□□ 0.43
SEC13-204ENST00000397099 CREBZFQ9NS37 354 aa17.72■□□□□ 0.43
SEC13-204ENST00000397099 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
SEC13-204ENST00000397099 NSFL1CQ9UNZ2 370 aaKnown RBP17.72■□□□□ 0.43
SEC13-204ENST00000397099 TNIP1Q15025 636 aa17.71■□□□□ 0.43
SEC13-204ENST00000397099 IFFO2Q5TF58 517 aa17.71■□□□□ 0.43
SEC13-204ENST00000397099 UBE3BQ7Z3V4 1068 aa17.71■□□□□ 0.43
SEC13-204ENST00000397099 WASHC4Q2M389 1173 aa17.7■□□□□ 0.42
SEC13-204ENST00000397099 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
SEC13-204ENST00000397099 TTLL11Q8NHH1 800 aa17.7■□□□□ 0.42
SEC13-204ENST00000397099 PTPRCP08575 1304 aa17.7■□□□□ 0.42
SEC13-204ENST00000397099 ALDH1L1O75891 902 aa17.69■□□□□ 0.42
SEC13-204ENST00000397099 ALDH1L2Q3SY69 923 aa17.69■□□□□ 0.42
SEC13-204ENST00000397099 MAP1SQ66K74 1059 aaPredicted RBP17.69■□□□□ 0.42
SEC13-204ENST00000397099 ANKIB1Q9P2G1 1089 aa17.69■□□□□ 0.42
SEC13-204ENST00000397099 MKRN1Q9UHC7 482 aaKnown RBP17.69■□□□□ 0.42
SEC13-204ENST00000397099 LTBP1Q14766 1721 aa17.69■□□□□ 0.42
SEC13-204ENST00000397099 C6orf229H3BNL8 230 aa17.68■□□□□ 0.42
SEC13-204ENST00000397099 BEND3Q5T5X7 828 aa17.68■□□□□ 0.42
SEC13-204ENST00000397099 TRMT2AQ8IZ69 625 aaKnown RBP17.68■□□□□ 0.42
SEC13-204ENST00000397099 CNTROBQ8N137 903 aa17.68■□□□□ 0.42
SEC13-204ENST00000397099 ZC3H12CQ9C0D7 883 aaKnown RBP17.68■□□□□ 0.42
SEC13-204ENST00000397099 SEC31BQ9NQW1 1179 aa17.68■□□□□ 0.42
SEC13-204ENST00000397099 DUOX1Q9NRD9 1551 aa17.68■□□□□ 0.42
SEC13-204ENST00000397099 BSDC1Q9NW68 430 aaPredicted RBP17.68■□□□□ 0.42
SEC13-204ENST00000397099 XDHP47989 1333 aa17.68■□□□□ 0.42
SEC13-204ENST00000397099 PASKQ96RG2 1323 aa17.68■□□□□ 0.42
SEC13-204ENST00000397099 IGHMBP2P38935 993 aaKnown RBP17.67■□□□□ 0.42
SEC13-204ENST00000397099 EPS15P42566 896 aa17.67■□□□□ 0.42
SEC13-204ENST00000397099 SCNN1DP51172 638 aa17.67■□□□□ 0.42
SEC13-204ENST00000397099 CIAPIN1Q6FI81 312 aa17.67■□□□□ 0.42
SEC13-204ENST00000397099 TBC1D16Q8TBP0 767 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms