RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 SH3TC1Q8TE82 1336 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 SHTN1A0MZ66 631 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 RASSF10A6NK89 507 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 BBOX1O75936 387 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 LMOD1P29536 600 aaPredicted RBP13.43□□□□□ -0.26
NEDD8-202ENST00000396828 WDR43Q15061 677 aaKnown RBP eCLIP13.43□□□□□ -0.26
NEDD8-202ENST00000396828 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 RTL5Q5HYW3 569 aaPredicted RBP13.43□□□□□ -0.26
NEDD8-202ENST00000396828 CST9Q5W186 159 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 DPP8Q6V1X1 898 aaPredicted RBP13.43□□□□□ -0.26
NEDD8-202ENST00000396828 FAM89AQ96GI7 184 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 ISCA1Q9BUE6 129 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 MBIPQ9NS73 344 aa13.43□□□□□ -0.26
NEDD8-202ENST00000396828 YDJCA8MPS7 323 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 RAD17O75943 681 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 GMPSP49915 693 aaPredicted RBP13.42□□□□□ -0.26
NEDD8-202ENST00000396828 GRAPQ13588 217 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 DEFB115Q30KQ5 88 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 DUSP27Q5VZP5 1158 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
NEDD8-202ENST00000396828 FAM9BQ8IZU0 186 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 MPNDQ8N594 471 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 PLBD2Q8NHP8 589 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 GRAPLQ8TC17 118 aaPredicted RBP13.42□□□□□ -0.26
NEDD8-202ENST00000396828 CELF1Q92879 486 aaKnown RBP13.42□□□□□ -0.26
NEDD8-202ENST00000396828 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 GPRC5DQ9NZD1 345 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 ZNRF3Q9ULT6 936 aa13.42□□□□□ -0.26
NEDD8-202ENST00000396828 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
NEDD8-202ENST00000396828 HIRAP54198 1017 aaPredicted RBP13.41□□□□□ -0.26
NEDD8-202ENST00000396828 KIAA2012Q0VF49 1180 aa13.41□□□□□ -0.26
NEDD8-202ENST00000396828 USP50Q70EL3 339 aaPredicted RBP13.41□□□□□ -0.26
NEDD8-202ENST00000396828 WBP1LQ9NX94 342 aa13.41□□□□□ -0.26
NEDD8-202ENST00000396828 LRRC37AA6NMS7 1700 aa13.41□□□□□ -0.26
NEDD8-202ENST00000396828 WDR33Q9C0J8 1336 aaKnown RBP13.4□□□□□ -0.26
NEDD8-202ENST00000396828 ELL2O00472 640 aaPredicted RBP13.4□□□□□ -0.26
NEDD8-202ENST00000396828 APAF1O14727 1248 aa13.4□□□□□ -0.26
NEDD8-202ENST00000396828 DLK2Q6UY11 383 aa13.4□□□□□ -0.26
NEDD8-202ENST00000396828 VPS33BQ9H267 617 aa13.4□□□□□ -0.26
NEDD8-202ENST00000396828 PHAXQ9H814 394 aaKnown RBP13.4□□□□□ -0.26
NEDD8-202ENST00000396828 DBF4Q9UBU7 674 aaPredicted RBP13.4□□□□□ -0.26
NEDD8-202ENST00000396828 ABT1Q9ULW3 272 aaKnown RBP13.4□□□□□ -0.26
NEDD8-202ENST00000396828 HOXB7P09629 217 aa13.39□□□□□ -0.27
NEDD8-202ENST00000396828 LBX1P52954 281 aa13.39□□□□□ -0.27
NEDD8-202ENST00000396828 SF3B3Q15393 1217 aaKnown RBP13.39□□□□□ -0.27
NEDD8-202ENST00000396828 CIAPIN1Q6FI81 312 aa13.39□□□□□ -0.27
NEDD8-202ENST00000396828 SUPT20HQ8NEM7 779 aa13.39□□□□□ -0.27
NEDD8-202ENST00000396828 GPR101Q96P66 508 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-202ENST00000396828 TMX4Q9H1E5 349 aaPredicted RBP13.39□□□□□ -0.27
NEDD8-202ENST00000396828 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
NEDD8-202ENST00000396828 ADARB2Q9NS39 739 aaKnown RBP13.39□□□□□ -0.27
NEDD8-202ENST00000396828 TRPM7Q96QT4 1865 aa13.39□□□□□ -0.27
NEDD8-202ENST00000396828 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
NEDD8-202ENST00000396828 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
NEDD8-202ENST00000396828 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
NEDD8-202ENST00000396828 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
NEDD8-202ENST00000396828 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
NEDD8-202ENST00000396828 GLIS2Q9BZE0 524 aaPredicted RBP13.38□□□□□ -0.27
NEDD8-202ENST00000396828 HYPKQ9NX55 129 aa13.38□□□□□ -0.27
NEDD8-202ENST00000396828 POLLQ9UGP5 575 aa13.38□□□□□ -0.27
NEDD8-202ENST00000396828 ZBTB12Q9Y330 459 aaPredicted RBP13.38□□□□□ -0.27
NEDD8-202ENST00000396828 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
NEDD8-202ENST00000396828 CTCFP49711 727 aaPredicted RBP13.37□□□□□ -0.27
NEDD8-202ENST00000396828 GPSM2P81274 684 aa13.37□□□□□ -0.27
NEDD8-202ENST00000396828 GRM1Q13255 1194 aa13.37□□□□□ -0.27
NEDD8-202ENST00000396828 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
NEDD8-202ENST00000396828 PRDM10Q9NQV6 1147 aa13.37□□□□□ -0.27
NEDD8-202ENST00000396828 PGAP2Q9UHJ9 254 aa13.37□□□□□ -0.27
NEDD8-202ENST00000396828 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
NEDD8-202ENST00000396828 IRS4O14654 1257 aaPredicted RBP13.36□□□□□ -0.27
NEDD8-202ENST00000396828 AOC2O75106 756 aa13.36□□□□□ -0.27
NEDD8-202ENST00000396828 EGFRP00533 1210 aa13.36□□□□□ -0.27
NEDD8-202ENST00000396828 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
NEDD8-202ENST00000396828 TRIM28Q13263 835 aaKnown RBP13.36□□□□□ -0.27
NEDD8-202ENST00000396828 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
NEDD8-202ENST00000396828 CAPNS2Q96L46 248 aa13.36□□□□□ -0.27
NEDD8-202ENST00000396828 BCL2L13Q9BXK5 485 aa13.36□□□□□ -0.27
NEDD8-202ENST00000396828 SEC31BQ9NQW1 1179 aa13.36□□□□□ -0.27
NEDD8-202ENST00000396828 CNOT7Q9UIV1 285 aaKnown RBP13.36□□□□□ -0.27
NEDD8-202ENST00000396828 TLL2Q9Y6L7 1015 aa13.36□□□□□ -0.27
NEDD8-202ENST00000396828 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 DOK7Q18PE1 504 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
NEDD8-202ENST00000396828 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 TSPYL6Q8N831 410 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 MYD88Q99836 296 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 IFT57Q9NWB7 429 aa13.35□□□□□ -0.27
NEDD8-202ENST00000396828 SCN9AQ15858 1988 aa13.34□□□□□ -0.27
NEDD8-202ENST00000396828 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
NEDD8-202ENST00000396828 PSMD14O00487 310 aa13.34□□□□□ -0.27
NEDD8-202ENST00000396828 CELF2O95319 508 aaKnown RBP13.34□□□□□ -0.27
NEDD8-202ENST00000396828 TNIP1Q15025 636 aa13.34□□□□□ -0.27
NEDD8-202ENST00000396828 SAMD7Q7Z3H4 446 aa13.34□□□□□ -0.27
NEDD8-202ENST00000396828 SAPCD2Q86UD0 394 aa13.34□□□□□ -0.27
NEDD8-202ENST00000396828 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
NEDD8-202ENST00000396828 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
NEDD8-202ENST00000396828 POLR2AP24928 1970 aaKnown RBP13.33□□□□□ -0.28
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