RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 PDE4AP27815 886 aa18.74■□□□□ 0.59
PTPN20-206ENST00000395722 DDR1Q08345 913 aa18.74■□□□□ 0.59
PTPN20-206ENST00000395722 FAM161AQ3B820 660 aa18.73■□□□□ 0.59
PTPN20-206ENST00000395722 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
PTPN20-206ENST00000395722 POLRMTO00411 1230 aaKnown RBP18.73■□□□□ 0.59
PTPN20-206ENST00000395722 LRRCC1Q9C099 1032 aa18.73■□□□□ 0.59
PTPN20-206ENST00000395722 LNPKQ9C0E8 428 aa18.73■□□□□ 0.59
PTPN20-206ENST00000395722 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
PTPN20-206ENST00000395722 LRP5O75197 1615 aa18.73■□□□□ 0.59
PTPN20-206ENST00000395722 MSH5O43196 834 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 SF3B3Q15393 1217 aaKnown RBP18.72■□□□□ 0.59
PTPN20-206ENST00000395722 KLHDC4Q8TBB5 520 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 GREM2Q9H772 168 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 SERPINB2P05120 415 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 PRR5LQ6MZQ0 368 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 ERC1Q8IUD2 1116 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 KIF1BPQ96EK5 621 aa18.72■□□□□ 0.59
PTPN20-206ENST00000395722 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
PTPN20-206ENST00000395722 CCDC57Q2TAC2 916 aa18.71■□□□□ 0.59
PTPN20-206ENST00000395722 CNBD1Q8NA66 436 aa18.71■□□□□ 0.59
PTPN20-206ENST00000395722 FBXO3Q9UK99 471 aa18.71■□□□□ 0.59
PTPN20-206ENST00000395722 TNRC6CQ9HCJ0 1690 aaKnown RBP18.71■□□□□ 0.59
PTPN20-206ENST00000395722 GTF2E1P29083 439 aaPredicted RBP18.7■□□□□ 0.58
PTPN20-206ENST00000395722 G3BP1Q13283 466 aaKnown RBP eCLIP18.7■□□□□ 0.58
PTPN20-206ENST00000395722 CCDC152Q4G0S7 254 aa18.7■□□□□ 0.58
PTPN20-206ENST00000395722 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
PTPN20-206ENST00000395722 APBB1O00213 710 aa18.7■□□□□ 0.58
PTPN20-206ENST00000395722 SMARCA5O60264 1052 aaPredicted RBP18.7■□□□□ 0.58
PTPN20-206ENST00000395722 CIAO1O76071 339 aa18.7■□□□□ 0.58
PTPN20-206ENST00000395722 SASH1O94885 1247 aa18.7■□□□□ 0.58
PTPN20-206ENST00000395722 ITGA6P23229 1130 aa18.7■□□□□ 0.58
PTPN20-206ENST00000395722 ANKRD18BA2A2Z9 1011 aa18.69■□□□□ 0.58
PTPN20-206ENST00000395722 ATG9AQ7Z3C6 839 aa18.69■□□□□ 0.58
PTPN20-206ENST00000395722 CCDC85AQ96PX6 553 aaPredicted RBP18.69■□□□□ 0.58
PTPN20-206ENST00000395722 EYA2O00167 538 aa18.68■□□□□ 0.58
PTPN20-206ENST00000395722 RGS3P49796 1198 aa18.68■□□□□ 0.58
PTPN20-206ENST00000395722 ZNF594Q96JF6 807 aaPredicted RBP18.68■□□□□ 0.58
PTPN20-206ENST00000395722 SIL1Q9H173 461 aa18.68■□□□□ 0.58
PTPN20-206ENST00000395722 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
PTPN20-206ENST00000395722 ZBTB47Q9UFB7 747 aaPredicted RBP18.68■□□□□ 0.58
PTPN20-206ENST00000395722 SALL3Q9BXA9 1300 aa18.67■□□□□ 0.58
PTPN20-206ENST00000395722 MMP10P09238 476 aa18.67■□□□□ 0.58
PTPN20-206ENST00000395722 SLC16A10Q8TF71 515 aa18.67■□□□□ 0.58
PTPN20-206ENST00000395722 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
PTPN20-206ENST00000395722 IL15P40933 162 aaPredicted RBP18.66■□□□□ 0.58
PTPN20-206ENST00000395722 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
PTPN20-206ENST00000395722 ST5P78524 1137 aa18.66■□□□□ 0.58
PTPN20-206ENST00000395722 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
PTPN20-206ENST00000395722 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
PTPN20-206ENST00000395722 CCDC24Q8N4L8 307 aa18.66■□□□□ 0.58
PTPN20-206ENST00000395722 PUS3Q9BZE2 481 aaKnown RBP18.66■□□□□ 0.58
PTPN20-206ENST00000395722 PDGFDQ9GZP0 370 aaPredicted RBP18.66■□□□□ 0.58
PTPN20-206ENST00000395722 SEC31BQ9NQW1 1179 aa18.66■□□□□ 0.58
PTPN20-206ENST00000395722 COL4A1P02462 1669 aa18.65■□□□□ 0.58
PTPN20-206ENST00000395722 KLRG2A4D1S0 409 aaPredicted RBP18.65■□□□□ 0.58
PTPN20-206ENST00000395722 LRRC24Q50LG9 513 aa18.65■□□□□ 0.58
PTPN20-206ENST00000395722 OTUD7AQ8TE49 926 aaPredicted RBP18.65■□□□□ 0.58
PTPN20-206ENST00000395722 IL1RAPL2Q9NP60 686 aa18.65■□□□□ 0.58
PTPN20-206ENST00000395722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.65■□□□□ 0.58
PTPN20-206ENST00000395722 ANKRD31Q8N7Z5 1873 aa18.65■□□□□ 0.58
PTPN20-206ENST00000395722 CRY2Q49AN0 593 aa18.64■□□□□ 0.58
PTPN20-206ENST00000395722 PELP1Q8IZL8 1130 aaKnown RBP18.64■□□□□ 0.58
PTPN20-206ENST00000395722 RIPOR2Q9Y4F9 1068 aa18.64■□□□□ 0.58
PTPN20-206ENST00000395722 PARP3Q9Y6F1 533 aa18.64■□□□□ 0.58
PTPN20-206ENST00000395722 NPHP1O15259 732 aa18.64■□□□□ 0.57
PTPN20-206ENST00000395722 TAF7LQ5H9L4 462 aa18.64■□□□□ 0.57
PTPN20-206ENST00000395722 TFCP2Q12800 502 aa18.63■□□□□ 0.57
PTPN20-206ENST00000395722 OSBPL3Q9H4L5 887 aa18.63■□□□□ 0.57
PTPN20-206ENST00000395722 GPR108Q9NPR9 543 aa18.63■□□□□ 0.57
PTPN20-206ENST00000395722 LDHAL6AQ6ZMR3 332 aa18.62■□□□□ 0.57
PTPN20-206ENST00000395722 ILDR2Q71H61 639 aa18.62■□□□□ 0.57
PTPN20-206ENST00000395722 CLASRPQ8N2M8 674 aaKnown RBP18.62■□□□□ 0.57
PTPN20-206ENST00000395722 CDC5LQ99459 802 aaKnown RBP18.62■□□□□ 0.57
PTPN20-206ENST00000395722 STAP2Q9UGK3 403 aa18.62■□□□□ 0.57
PTPN20-206ENST00000395722 BRIP1Q9BX63 1249 aa18.62■□□□□ 0.57
PTPN20-206ENST00000395722 EAF2Q96CJ1 260 aaPredicted RBP18.61■□□□□ 0.57
PTPN20-206ENST00000395722 PDE1AP54750 535 aa18.61■□□□□ 0.57
PTPN20-206ENST00000395722 SPEF2Q9C093 1822 aa18.6■□□□□ 0.57
PTPN20-206ENST00000395722 TAF1P21675 1872 aa18.6■□□□□ 0.57
PTPN20-206ENST00000395722 AOX1Q06278 1338 aa18.6■□□□□ 0.57
PTPN20-206ENST00000395722 IGHMBP2P38935 993 aaKnown RBP18.6■□□□□ 0.57
PTPN20-206ENST00000395722 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
PTPN20-206ENST00000395722 VGLL2Q8N8G2 317 aa18.6■□□□□ 0.57
PTPN20-206ENST00000395722 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
PTPN20-206ENST00000395722 ZNF609O15014 1411 aa18.59■□□□□ 0.57
PTPN20-206ENST00000395722 MX1P20591 662 aa18.59■□□□□ 0.57
PTPN20-206ENST00000395722 HOXA10P31260 410 aaPredicted RBP18.59■□□□□ 0.57
PTPN20-206ENST00000395722 ANKRD18AQ8IVF6 992 aa18.59■□□□□ 0.57
PTPN20-206ENST00000395722 CNNM1Q9NRU3 951 aa18.59■□□□□ 0.57
PTPN20-206ENST00000395722 CEP126Q9P2H0 1117 aa18.59■□□□□ 0.57
PTPN20-206ENST00000395722 MROH5Q6ZUA9 1318 aa18.59■□□□□ 0.57
PTPN20-206ENST00000395722 DDX46Q7L014 1031 aaKnown RBP18.59■□□□□ 0.57
PTPN20-206ENST00000395722 AACSQ86V21 672 aa18.59■□□□□ 0.57
PTPN20-206ENST00000395722 CELF1Q92879 486 aaKnown RBP18.59■□□□□ 0.57
PTPN20-206ENST00000395722 BSDC1Q9NW68 430 aaPredicted RBP18.59■□□□□ 0.57
PTPN20-206ENST00000395722 A0A1B0GUL6 1792 aa18.58■□□□□ 0.57
PTPN20-206ENST00000395722 MPHOSPH8Q99549 860 aa18.58■□□□□ 0.56
PTPN20-206ENST00000395722 RPS8P62241 208 aaKnown RBP18.57■□□□□ 0.56
PTPN20-206ENST00000395722 BMP2KLQ5H9B9 411 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms