RNA–Protein interactions for RNA: ENST00000395721.6

PTPN20-205, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 2,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-205ENST00000395721 MYD88Q99836 296 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 PHAXQ9H814 394 aaKnown RBP11.32□□□□□ -0.6
PTPN20-205ENST00000395721 PPIP5K2O43314 1243 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 TRIM28Q13263 835 aaKnown RBP11.32□□□□□ -0.6
PTPN20-205ENST00000395721 TMC4Q7Z404 712 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 FAM89AQ96GI7 184 aa11.32□□□□□ -0.6
PTPN20-205ENST00000395721 L3MBTL3Q96JM7 780 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-205ENST00000395721 LAMB2P55268 1798 aa11.31□□□□□ -0.6
PTPN20-205ENST00000395721 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
PTPN20-205ENST00000395721 FZD9O00144 591 aa11.31□□□□□ -0.6
PTPN20-205ENST00000395721 RTL5Q5HYW3 569 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-205ENST00000395721 DPP8Q6V1X1 898 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-205ENST00000395721 SP8Q8IXZ3 490 aa11.31□□□□□ -0.6
PTPN20-205ENST00000395721 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
PTPN20-205ENST00000395721 HACL1Q9UJ83 578 aa11.31□□□□□ -0.6
PTPN20-205ENST00000395721 GJA3Q9Y6H8 435 aa11.31□□□□□ -0.6
PTPN20-205ENST00000395721 IRS4O14654 1257 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-205ENST00000395721 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-205ENST00000395721 MPNDQ8N594 471 aa11.3□□□□□ -0.6
PTPN20-205ENST00000395721 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-205ENST00000395721 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
PTPN20-205ENST00000395721 LMOD1P29536 600 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-205ENST00000395721 SF3B3Q15393 1217 aaKnown RBP11.29□□□□□ -0.6
PTPN20-205ENST00000395721 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-205ENST00000395721 SLC51AQ86UW1 340 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 LDHDQ86WU2 507 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 GPC2Q8N158 579 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 VPS33BQ9H267 617 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 SCN4AP35499 1836 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 WDR63Q8IWG1 891 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 FAM9BQ8IZU0 186 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 ZBTB38Q8NAP3 1195 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-205ENST00000395721 CCDC191Q8NCU4 936 aa11.29□□□□□ -0.6
PTPN20-205ENST00000395721 METTL22Q9BUU2 404 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-205ENST00000395721 DDX60Q8IY21 1712 aaKnown RBP11.29□□□□□ -0.6
PTPN20-205ENST00000395721 EPHX2P34913 555 aa11.28□□□□□ -0.6
PTPN20-205ENST00000395721 HTRA3P83110 453 aa11.28□□□□□ -0.6
PTPN20-205ENST00000395721 NEXNQ0ZGT2 675 aa11.28□□□□□ -0.6
PTPN20-205ENST00000395721 AOC3Q16853 763 aa11.28□□□□□ -0.6
PTPN20-205ENST00000395721 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
PTPN20-205ENST00000395721 MAP3K2Q9Y2U5 619 aa11.28□□□□□ -0.6
PTPN20-205ENST00000395721 PCCAP05165 728 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-205ENST00000395721 NOP58Q9Y2X3 529 aaKnown RBP11.28□□□□□ -0.6
PTPN20-205ENST00000395721 KSR2Q6VAB6 950 aa11.28□□□□□ -0.6
PTPN20-205ENST00000395721 RTFDC1Q9BY42 306 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-205ENST00000395721 PNMA8AQ86V59 439 aaPredicted RBP11.27□□□□□ -0.61
PTPN20-205ENST00000395721 KLRG1Q96E93 195 aa11.27□□□□□ -0.61
PTPN20-205ENST00000395721 COL4A5P29400 1685 aa11.27□□□□□ -0.61
PTPN20-205ENST00000395721 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
PTPN20-205ENST00000395721 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
PTPN20-205ENST00000395721 CCDC152Q4G0S7 254 aa11.27□□□□□ -0.61
PTPN20-205ENST00000395721 CELF1Q92879 486 aaKnown RBP11.27□□□□□ -0.61
PTPN20-205ENST00000395721 ZNRF3Q9ULT6 936 aa11.27□□□□□ -0.61
PTPN20-205ENST00000395721 PI4KAP2A4QPH2 592 aa11.26□□□□□ -0.61
PTPN20-205ENST00000395721 PDE8AO60658 829 aa11.26□□□□□ -0.61
PTPN20-205ENST00000395721 DNAJC5GQ8N7S2 189 aa11.26□□□□□ -0.61
PTPN20-205ENST00000395721 PI4KAP1Q8N8J0 262 aa11.26□□□□□ -0.61
PTPN20-205ENST00000395721 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
PTPN20-205ENST00000395721 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
PTPN20-205ENST00000395721 KIAA2012Q0VF49 1180 aa11.26□□□□□ -0.61
PTPN20-205ENST00000395721 C6orf229H3BNL8 230 aa11.25□□□□□ -0.61
PTPN20-205ENST00000395721 RPS8P62241 208 aaKnown RBP11.25□□□□□ -0.61
PTPN20-205ENST00000395721 JARID2Q92833 1246 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-205ENST00000395721 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
PTPN20-205ENST00000395721 LRRC37AA6NMS7 1700 aa11.25□□□□□ -0.61
PTPN20-205ENST00000395721 EXOSC9Q06265 439 aaKnown RBP11.25□□□□□ -0.61
PTPN20-205ENST00000395721 CIAPIN1Q6FI81 312 aa11.25□□□□□ -0.61
PTPN20-205ENST00000395721 EYA3Q99504 573 aa11.25□□□□□ -0.61
PTPN20-205ENST00000395721 CDHR2Q9BYE9 1310 aa11.25□□□□□ -0.61
PTPN20-205ENST00000395721 FLIIQ13045 1269 aa11.24□□□□□ -0.61
PTPN20-205ENST00000395721 FKBP5Q13451 457 aaPredicted RBP11.24□□□□□ -0.61
PTPN20-205ENST00000395721 G2E3Q7L622 706 aa11.24□□□□□ -0.61
PTPN20-205ENST00000395721 TNIP1Q15025 636 aa11.24□□□□□ -0.61
PTPN20-205ENST00000395721 BCL2L13Q9BXK5 485 aa11.24□□□□□ -0.61
PTPN20-205ENST00000395721 TAF1P21675 1872 aa11.24□□□□□ -0.61
PTPN20-205ENST00000395721 GPSM2P81274 684 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 CXCL9Q07325 125 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 CCDC85AQ96PX6 553 aaPredicted RBP11.23□□□□□ -0.61
PTPN20-205ENST00000395721 SEC31BQ9NQW1 1179 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 NEURL1BA8MQ27 555 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 IGKV5-2P06315 115 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 SCNN1DP51172 638 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 WASHC4Q2M389 1173 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 ANKRD18AQ8IVF6 992 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 DUOX1Q9NRD9 1551 aa11.23□□□□□ -0.61
PTPN20-205ENST00000395721 RIMBP2O15034 1052 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 EIF5BO60841 1220 aaKnown RBP11.22□□□□□ -0.61
PTPN20-205ENST00000395721 RAD17O75943 681 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 EPS15P42566 896 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 GMPSP49915 693 aaPredicted RBP11.22□□□□□ -0.61
PTPN20-205ENST00000395721 CTSWP56202 376 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 DNAAF4Q8WXU2 420 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 CDC5LQ99459 802 aaKnown RBP11.22□□□□□ -0.61
PTPN20-205ENST00000395721 G3V3G9 751 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 VAMP4O75379 141 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 CWF19L2Q2TBE0 894 aaKnown RBP11.22□□□□□ -0.61
PTPN20-205ENST00000395721 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
PTPN20-205ENST00000395721 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
PTPN20-205ENST00000395721 USP50Q70EL3 339 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms