RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 NBPF26B4DH59 902 aa18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 PTPN12Q05209 780 aaKnown RBP18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 NBPF14Q5TI25 921 aa18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 PRPF40BQ6NWY9 871 aaKnown RBP18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 NBPF10Q6P3W6 841 aaKnown RBP18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 FAM43AQ8N2R8 423 aa18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 NBPF15Q8N660 670 aa18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 LARP6Q9BRS8 491 aaKnown RBP18.65■□□□□ 0.58
RAPGEF3-203ENST00000395360 ARFGEF2Q9Y6D5 1785 aa18.64■□□□□ 0.58
RAPGEF3-203ENST00000395360 CPA1P15085 419 aa18.64■□□□□ 0.57
RAPGEF3-203ENST00000395360 RFX5P48382 616 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF3-203ENST00000395360 RABL6Q3YEC7 729 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF3-203ENST00000395360 HIP1O00291 1037 aa18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 NMIQ13287 307 aaPredicted RBP18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 CCDC171Q6TFL3 1326 aa18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 UBR2Q8IWV8 1755 aa18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 ADCK5Q3MIX3 580 aa18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 GPT2Q8TD30 523 aa18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 FSD1Q9BTV5 496 aa18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 ATG3Q9NT62 314 aa18.63■□□□□ 0.57
RAPGEF3-203ENST00000395360 LAMB4A4D0S4 1761 aa18.62■□□□□ 0.57
RAPGEF3-203ENST00000395360 RUFY3Q7L099 469 aa18.62■□□□□ 0.57
RAPGEF3-203ENST00000395360 LIMCH1Q9UPQ0 1083 aa18.62■□□□□ 0.57
RAPGEF3-203ENST00000395360 BTAF1O14981 1849 aa18.62■□□□□ 0.57
RAPGEF3-203ENST00000395360 TFCP2Q12800 502 aa18.62■□□□□ 0.57
RAPGEF3-203ENST00000395360 JAKMIP1Q96N16 626 aaKnown RBP18.62■□□□□ 0.57
RAPGEF3-203ENST00000395360 NECTIN1Q15223 517 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 TTLL7Q6ZT98 887 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 ASAP1Q9ULH1 1129 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 ERBB4Q15303 1308 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 KCPQ6ZWJ8 1503 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 A0A0D9SFI3 127 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 KCNJ4P48050 445 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 CASP7P55210 303 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 ZSCAN23Q3MJ62 389 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 TNNI3KQ59H18 835 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 RBM8AQ9Y5S9 174 aaKnown RBP18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 FPGT-TNNI3KV9GXZ4 949 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 COL15A1P39059 1388 aa18.61■□□□□ 0.57
RAPGEF3-203ENST00000395360 TRIM37O94972 964 aa18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 A1BGP04217 495 aa18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 ZKSCAN1P17029 563 aaPredicted RBP18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 PALLDQ8WX93 1383 aa18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 FOXD4L6Q3SYB3 417 aaPredicted RBP18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 LMBR1LQ6UX01 489 aa18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 FOXD4L3Q6VB84 417 aaPredicted RBP18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 MAP4K1Q92918 833 aa18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 KCNB2Q92953 911 aa18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 EDC3Q96F86 508 aaKnown RBP18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 CHMP3Q9Y3E7 222 aa18.6■□□□□ 0.57
RAPGEF3-203ENST00000395360 ZNF445P59923 1031 aa18.59■□□□□ 0.57
RAPGEF3-203ENST00000395360 VSIG10Q8N0Z9 540 aa18.59■□□□□ 0.57
RAPGEF3-203ENST00000395360 ZSWIM6Q9HCJ5 1215 aa18.59■□□□□ 0.57
RAPGEF3-203ENST00000395360 PDRG1Q9NUG6 133 aa18.59■□□□□ 0.57
RAPGEF3-203ENST00000395360 RBM27Q9P2N5 1060 aaKnown RBP18.59■□□□□ 0.57
RAPGEF3-203ENST00000395360 WDR33Q9C0J8 1336 aaKnown RBP18.59■□□□□ 0.57
RAPGEF3-203ENST00000395360 VPS53Q5VIR6 699 aa18.58■□□□□ 0.57
RAPGEF3-203ENST00000395360 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.57
RAPGEF3-203ENST00000395360 PTF1AQ7RTS3 328 aa18.58■□□□□ 0.57
RAPGEF3-203ENST00000395360 TM6SF1Q9BZW5 370 aa18.58■□□□□ 0.57
RAPGEF3-203ENST00000395360 CYP46A1Q9Y6A2 500 aa18.58■□□□□ 0.57
RAPGEF3-203ENST00000395360 SNRKQ9NRH2 765 aa18.58■□□□□ 0.56
RAPGEF3-203ENST00000395360 NSFL1CQ9UNZ2 370 aaKnown RBP18.58■□□□□ 0.56
RAPGEF3-203ENST00000395360 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.58■□□□□ 0.56
RAPGEF3-203ENST00000395360 H7C1W4 665 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 LARGE1O95461 756 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 ATP5JP18859 108 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 ZBTB3Q9H5J0 574 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 CWC25Q9NXE8 425 aaPredicted RBP18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 NDUFB9Q9Y6M9 179 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 RPAP1Q9BWH6 1393 aaPredicted RBP18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 FOXO4P98177 505 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 ZNF831Q5JPB2 1677 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 EP400Q96L91 3159 aa18.57■□□□□ 0.56
RAPGEF3-203ENST00000395360 NASPP49321 788 aaPredicted RBP18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 DBNDD2Q9BQY9 259 aa18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 CICQ96RK0 1608 aaPredicted RBP18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 SLC27A2O14975 620 aa18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 ZNF589Q86UQ0 364 aaPredicted RBP18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 RRAGDQ9NQL2 400 aaPredicted RBP18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 TMEM63CQ9P1W3 806 aa18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 MED23Q9ULK4 1368 aa18.56■□□□□ 0.56
RAPGEF3-203ENST00000395360 TEX13AQ9BXU3 409 aaPredicted RBP18.55■□□□□ 0.56
RAPGEF3-203ENST00000395360 SMC3Q9UQE7 1217 aa18.55■□□□□ 0.56
RAPGEF3-203ENST00000395360 MBD3O95983 291 aa18.55■□□□□ 0.56
RAPGEF3-203ENST00000395360 CCDC83Q8IWF9 413 aa18.55■□□□□ 0.56
RAPGEF3-203ENST00000395360 DNAJC2Q99543 621 aaKnown RBP18.55■□□□□ 0.56
RAPGEF3-203ENST00000395360 GDPD2Q9HCC8 539 aa18.55■□□□□ 0.56
RAPGEF3-203ENST00000395360 LY75O60449 1722 aa18.54■□□□□ 0.56
RAPGEF3-203ENST00000395360 LOC102724428A0A0B4J2F2 783 aa18.54■□□□□ 0.56
RAPGEF3-203ENST00000395360 SIK1P57059 783 aa18.54■□□□□ 0.56
RAPGEF3-203ENST00000395360 PLSCR1O15162 318 aa18.54■□□□□ 0.56
RAPGEF3-203ENST00000395360 SYT1P21579 422 aa18.54■□□□□ 0.56
RAPGEF3-203ENST00000395360 RNF20Q5VTR2 975 aa18.54■□□□□ 0.56
RAPGEF3-203ENST00000395360 CCDC125Q86Z20 511 aa18.54■□□□□ 0.56
RAPGEF3-203ENST00000395360 RGPD3A6NKT7 1758 aaPredicted RBP18.53■□□□□ 0.56
RAPGEF3-203ENST00000395360 RGPD4Q7Z3J3 1758 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms