RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 RTKN2Q8IZC4 609 aa17.06■□□□□ 0.32
HLA-DMA-202ENST00000395303 TAOK3Q9H2K8 898 aa17.06■□□□□ 0.32
HLA-DMA-202ENST00000395303 HSP90B1P14625 803 aaKnown RBP17.05■□□□□ 0.32
HLA-DMA-202ENST00000395303 GRIPAP1Q4V328 841 aa17.05■□□□□ 0.32
HLA-DMA-202ENST00000395303 KLRG1Q96E93 195 aa17.05■□□□□ 0.32
HLA-DMA-202ENST00000395303 COL4A1P02462 1669 aa17.04■□□□□ 0.32
HLA-DMA-202ENST00000395303 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
HLA-DMA-202ENST00000395303 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
HLA-DMA-202ENST00000395303 OLFM4Q6UX06 510 aa17.04■□□□□ 0.32
HLA-DMA-202ENST00000395303 MRPL50Q8N5N7 158 aaKnown RBP17.04■□□□□ 0.32
HLA-DMA-202ENST00000395303 JMYQ8N9B5 988 aa17.04■□□□□ 0.32
HLA-DMA-202ENST00000395303 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
HLA-DMA-202ENST00000395303 SPEF2Q9C093 1822 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 H7C1W4 665 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 PDE8AO60658 829 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 BBOX1O75936 387 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 GRAPQ13588 217 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 GCKRQ14397 625 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 CWF19L2Q2TBE0 894 aaKnown RBP17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 ALDH1L2Q3SY69 923 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 GRAPLQ8TC17 118 aaPredicted RBP17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 PSMD1Q99460 953 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 LTBP1Q14766 1721 aa17.03■□□□□ 0.32
HLA-DMA-202ENST00000395303 CASP7P55210 303 aa17.02■□□□□ 0.32
HLA-DMA-202ENST00000395303 RTL5Q5HYW3 569 aaPredicted RBP17.02■□□□□ 0.32
HLA-DMA-202ENST00000395303 TMC4Q7Z404 712 aa17.02■□□□□ 0.32
HLA-DMA-202ENST00000395303 SMC1BQ8NDV3 1235 aa17.02■□□□□ 0.32
HLA-DMA-202ENST00000395303 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
HLA-DMA-202ENST00000395303 PCNTO95613 3336 aa17.01■□□□□ 0.31
HLA-DMA-202ENST00000395303 F6X3S4 739 aa17.01■□□□□ 0.31
HLA-DMA-202ENST00000395303 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
HLA-DMA-202ENST00000395303 BEND3Q5T5X7 828 aa17.01■□□□□ 0.31
HLA-DMA-202ENST00000395303 SP8Q8IXZ3 490 aa17.01■□□□□ 0.31
HLA-DMA-202ENST00000395303 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
HLA-DMA-202ENST00000395303 PLA2G12BQ9BX93 195 aa17.01■□□□□ 0.31
HLA-DMA-202ENST00000395303 PTPRCP08575 1304 aa17■□□□□ 0.31
HLA-DMA-202ENST00000395303 POTECB2RU33 542 aa17■□□□□ 0.31
HLA-DMA-202ENST00000395303 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
HLA-DMA-202ENST00000395303 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
HLA-DMA-202ENST00000395303 JARID2Q92833 1246 aaPredicted RBP16.99■□□□□ 0.31
HLA-DMA-202ENST00000395303 RTL9Q8NET4 1388 aa16.99■□□□□ 0.31
HLA-DMA-202ENST00000395303 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 SCN4AP35499 1836 aa16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 IARSP41252 1262 aaKnown RBP16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 CCDC152Q4G0S7 254 aa16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 CELF1Q92879 486 aaKnown RBP16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 RTFDC1Q9BY42 306 aaPredicted RBP16.98■□□□□ 0.31
HLA-DMA-202ENST00000395303 COL4A5P29400 1685 aa16.97■□□□□ 0.31
HLA-DMA-202ENST00000395303 CTSWP56202 376 aa16.97■□□□□ 0.31
HLA-DMA-202ENST00000395303 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
HLA-DMA-202ENST00000395303 TTLL11Q8NHH1 800 aa16.97■□□□□ 0.31
HLA-DMA-202ENST00000395303 VPS33BQ9H267 617 aa16.97■□□□□ 0.31
HLA-DMA-202ENST00000395303 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
HLA-DMA-202ENST00000395303 A0A1B0GUL6 1792 aa16.97■□□□□ 0.31
HLA-DMA-202ENST00000395303 ZBED9Q6R2W3 1325 aa16.96■□□□□ 0.31
HLA-DMA-202ENST00000395303 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.31
HLA-DMA-202ENST00000395303 SEC31BQ9NQW1 1179 aa16.96■□□□□ 0.31
HLA-DMA-202ENST00000395303 TMX4Q9H1E5 349 aaPredicted RBP16.95■□□□□ 0.3
HLA-DMA-202ENST00000395303 PSME4Q14997 1843 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 FZD9O00144 591 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 CSF1RP07333 972 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 RARSP54136 660 aaKnown RBP16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 COL13A1Q5TAT6 717 aaPredicted RBP16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 MPNDQ8N594 471 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 SUPT20HQ8NEM7 779 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 SRCIN1Q9C0H9 1055 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 UTYO14607 1347 aa16.94■□□□□ 0.3
HLA-DMA-202ENST00000395303 GRM8O00222 908 aa16.93■□□□□ 0.3
HLA-DMA-202ENST00000395303 DPY19L2Q6NUT2 758 aa16.93■□□□□ 0.3
HLA-DMA-202ENST00000395303 SLC4A10Q6U841 1118 aa16.92■□□□□ 0.3
HLA-DMA-202ENST00000395303 DPP8Q6V1X1 898 aaPredicted RBP16.92■□□□□ 0.3
HLA-DMA-202ENST00000395303 CDC5LQ99459 802 aaKnown RBP16.92■□□□□ 0.3
HLA-DMA-202ENST00000395303 GREM2Q9H772 168 aa16.92■□□□□ 0.3
HLA-DMA-202ENST00000395303 FOXO4P98177 505 aa16.91■□□□□ 0.3
HLA-DMA-202ENST00000395303 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
HLA-DMA-202ENST00000395303 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
HLA-DMA-202ENST00000395303 SCN9AQ15858 1988 aa16.91■□□□□ 0.3
HLA-DMA-202ENST00000395303 KIAA2012Q0VF49 1180 aa16.9■□□□□ 0.3
HLA-DMA-202ENST00000395303 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
HLA-DMA-202ENST00000395303 ARHGAP45Q92619 1136 aa16.9■□□□□ 0.3
HLA-DMA-202ENST00000395303 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
HLA-DMA-202ENST00000395303 CCDC85AQ96PX6 553 aaPredicted RBP16.9■□□□□ 0.3
HLA-DMA-202ENST00000395303 BSDC1Q9NW68 430 aaPredicted RBP16.9■□□□□ 0.3
HLA-DMA-202ENST00000395303 ZNF541Q9H0D2 1346 aa16.9■□□□□ 0.3
HLA-DMA-202ENST00000395303 PPIP5K2O43314 1243 aa16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 DDNO94850 711 aaPredicted RBP16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 GPSM2P81274 684 aa16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 LARGE2Q8N3Y3 721 aa16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 C9orf78Q9NZ63 289 aaPredicted RBP16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 POLLQ9UGP5 575 aa16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 KIF16BQ96L93 1317 aa16.89■□□□□ 0.29
HLA-DMA-202ENST00000395303 ITGA6P23229 1130 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms