RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 RILPL2Q969X0 211 aa15.4■□□□□ 0.06
SSH2-203ENST00000394848 USP42Q9H9J4 1324 aaKnown RBP15.4■□□□□ 0.06
SSH2-203ENST00000394848 ZPR1O75312 459 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 GPTP24298 496 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 RBM25P49756 843 aaKnown RBP15.39■□□□□ 0.05
SSH2-203ENST00000394848 AACSQ86V21 672 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 NLRP10Q86W26 655 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 PI4K2BQ8TCG2 481 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 FAM89AQ96GI7 184 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 TTC41PQ6P2S7 1318 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 UBR3Q6ZT12 1888 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 EAF2Q96CJ1 260 aaPredicted RBP15.39■□□□□ 0.05
SSH2-203ENST00000394848 GPATCH3Q96I76 525 aa15.39■□□□□ 0.05
SSH2-203ENST00000394848 ERC2O15083 957 aa15.38■□□□□ 0.05
SSH2-203ENST00000394848 SLC4A3P48751 1232 aa15.38■□□□□ 0.05
SSH2-203ENST00000394848 USPL1Q5W0Q7 1092 aa15.38■□□□□ 0.05
SSH2-203ENST00000394848 BCL2L12Q9HB09 334 aa15.38■□□□□ 0.05
SSH2-203ENST00000394848 ECHDC1Q9NTX5 307 aa15.38■□□□□ 0.05
SSH2-203ENST00000394848 SRP68Q9UHB9 627 aaKnown RBP15.38■□□□□ 0.05
SSH2-203ENST00000394848 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.38■□□□□ 0.05
SSH2-203ENST00000394848 AFDNP55196 1824 aaKnown RBP15.38■□□□□ 0.05
SSH2-203ENST00000394848 GLRX3O76003 335 aaKnown RBP15.37■□□□□ 0.05
SSH2-203ENST00000394848 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
SSH2-203ENST00000394848 GYS1P13807 737 aa15.36■□□□□ 0.05
SSH2-203ENST00000394848 BECN1Q14457 450 aa15.36■□□□□ 0.05
SSH2-203ENST00000394848 ZNF34Q8IZ26 560 aa15.36■□□□□ 0.05
SSH2-203ENST00000394848 PLA2G12BQ9BX93 195 aa15.36■□□□□ 0.05
SSH2-203ENST00000394848 CCDC8Q9H0W5 538 aaPredicted RBP15.36■□□□□ 0.05
SSH2-203ENST00000394848 TFCP2Q12800 502 aa15.36■□□□□ 0.05
SSH2-203ENST00000394848 TRMT112Q9UI30 125 aaKnown RBP15.36■□□□□ 0.05
SSH2-203ENST00000394848 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
SSH2-203ENST00000394848 REC8O95072 547 aa15.35■□□□□ 0.05
SSH2-203ENST00000394848 MAP4K4O95819 1239 aaPredicted RBP15.35■□□□□ 0.05
SSH2-203ENST00000394848 CHMLP26374 656 aa15.35■□□□□ 0.05
SSH2-203ENST00000394848 CCDC57Q2TAC2 916 aa15.35■□□□□ 0.05
SSH2-203ENST00000394848 CNTROBQ8N137 903 aa15.35■□□□□ 0.05
SSH2-203ENST00000394848 SYNE4Q8N205 404 aa15.35■□□□□ 0.05
SSH2-203ENST00000394848 USP26Q9BXU7 913 aa15.35■□□□□ 0.05
SSH2-203ENST00000394848 CSF1RP07333 972 aa15.34■□□□□ 0.05
SSH2-203ENST00000394848 R3HDM1Q15032 1099 aaKnown RBP15.34■□□□□ 0.05
SSH2-203ENST00000394848 NLGN1Q8N2Q7 840 aa15.34■□□□□ 0.05
SSH2-203ENST00000394848 SLC16A10Q8TF71 515 aa15.34■□□□□ 0.05
SSH2-203ENST00000394848 PDGFDQ9GZP0 370 aaPredicted RBP15.34■□□□□ 0.05
SSH2-203ENST00000394848 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
SSH2-203ENST00000394848 ATG9AQ7Z3C6 839 aa15.34■□□□□ 0.05
SSH2-203ENST00000394848 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
SSH2-203ENST00000394848 UBN2Q6ZU65 1347 aa15.33■□□□□ 0.04
SSH2-203ENST00000394848 EYA2O00167 538 aa15.33■□□□□ 0.04
SSH2-203ENST00000394848 IRS4O14654 1257 aaPredicted RBP15.33■□□□□ 0.04
SSH2-203ENST00000394848 IL15P40933 162 aaPredicted RBP15.33■□□□□ 0.04
SSH2-203ENST00000394848 ZNF594Q96JF6 807 aaPredicted RBP15.33■□□□□ 0.04
SSH2-203ENST00000394848 ESYT1Q9BSJ8 1104 aa15.33■□□□□ 0.04
SSH2-203ENST00000394848 TLR7Q9NYK1 1049 aaKnown RBP15.33■□□□□ 0.04
SSH2-203ENST00000394848 QSER1Q2KHR3 1735 aa15.32■□□□□ 0.04
SSH2-203ENST00000394848 CIAO1O76071 339 aa15.32■□□□□ 0.04
SSH2-203ENST00000394848 IFIT5Q13325 482 aaKnown RBP15.32■□□□□ 0.04
SSH2-203ENST00000394848 TBC1D9BQ66K14 1250 aa15.32■□□□□ 0.04
SSH2-203ENST00000394848 NIP7Q9Y221 180 aaKnown RBP eCLIP15.32■□□□□ 0.04
SSH2-203ENST00000394848 C4AP0C0L4 1744 aa15.32■□□□□ 0.04
SSH2-203ENST00000394848 TUBGCP6Q96RT7 1819 aa15.32■□□□□ 0.04
SSH2-203ENST00000394848 TM4SF1P30408 202 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 PARP10Q53GL7 1025 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 SUSD4Q5VX71 490 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 TTLL11Q8NHH1 800 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 CCDC85AQ96PX6 553 aaPredicted RBP15.31■□□□□ 0.04
SSH2-203ENST00000394848 KIF2CQ99661 725 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 PDE8AO60658 829 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 NFIXQ14938 502 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 SETDB2Q96T68 719 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 UTP14AQ9BVJ6 771 aaKnown RBP15.31■□□□□ 0.04
SSH2-203ENST00000394848 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 FBXO3Q9UK99 471 aa15.31■□□□□ 0.04
SSH2-203ENST00000394848 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
SSH2-203ENST00000394848 CTSWP56202 376 aa15.3■□□□□ 0.04
SSH2-203ENST00000394848 TAF7LQ5H9L4 462 aa15.3■□□□□ 0.04
SSH2-203ENST00000394848 EVI5LQ96CN4 794 aa15.3■□□□□ 0.04
SSH2-203ENST00000394848 PUS3Q9BZE2 481 aaKnown RBP15.3■□□□□ 0.04
SSH2-203ENST00000394848 GPR108Q9NPR9 543 aa15.3■□□□□ 0.04
SSH2-203ENST00000394848 DBNLQ9UJU6 430 aaKnown RBP15.3■□□□□ 0.04
SSH2-203ENST00000394848 BCORQ6W2J9 1755 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
SSH2-203ENST00000394848 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 BOLA2Q9H3K6 86 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 SH3TC1Q8TE82 1336 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 FAM177BA6PVY3 158 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 ATP5JP18859 108 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 GREM2Q9H772 168 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 CEP126Q9P2H0 1117 aa15.29■□□□□ 0.04
SSH2-203ENST00000394848 ANKRD18BA2A2Z9 1011 aa15.28■□□□□ 0.04
SSH2-203ENST00000394848 ITGA6P23229 1130 aa15.28■□□□□ 0.04
SSH2-203ENST00000394848 DBNDD2Q9BQY9 259 aa15.28■□□□□ 0.04
SSH2-203ENST00000394848 CARMIL3Q8ND23 1372 aa15.27■□□□□ 0.04
SSH2-203ENST00000394848 TIMM10P62072 90 aa15.27■□□□□ 0.04
SSH2-203ENST00000394848 MSL1Q68DK7 614 aa15.27■□□□□ 0.04
SSH2-203ENST00000394848 MTFR1LQ9H019 292 aa15.27■□□□□ 0.04
SSH2-203ENST00000394848 ANO2Q9NQ90 1003 aa15.27■□□□□ 0.04
SSH2-203ENST00000394848 NUP98P52948 1817 aa15.27■□□□□ 0.04
SSH2-203ENST00000394848 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms