RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
SYNE2-205ENST00000394768 STK10O94804 968 aaKnown RBP8.47□□□□□ -1.05
SYNE2-205ENST00000394768 SPAG5Q96R06 1193 aa8.47□□□□□ -1.05
SYNE2-205ENST00000394768 JADE2Q9NQC1 790 aa8.47□□□□□ -1.05
SYNE2-205ENST00000394768 DBF4Q9UBU7 674 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-205ENST00000394768 GIPC1O14908 333 aa8.47□□□□□ -1.05
SYNE2-205ENST00000394768 CCT6BQ92526 530 aa8.47□□□□□ -1.05
SYNE2-205ENST00000394768 PUS7Q96PZ0 661 aaKnown RBP8.47□□□□□ -1.05
SYNE2-205ENST00000394768 SSFA2P28290 1259 aa8.47□□□□□ -1.05
SYNE2-205ENST00000394768 CLUL1Q15846 466 aa8.47□□□□□ -1.05
SYNE2-205ENST00000394768 GOLGA8AA7E2F4 631 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 PPP2R1AP30153 589 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 CFAP157Q5JU67 520 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 KIAA1107Q9UPP5 1409 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 BICDL2A1A5D9 508 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 CBX1P83916 185 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 ZBTB16Q05516 673 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 TAF7Q15545 349 aaPredicted RBP8.46□□□□□ -1.05
SYNE2-205ENST00000394768 JDP2Q8WYK2 163 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.46□□□□□ -1.05
SYNE2-205ENST00000394768 TSPY3P0CV98 308 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 TSPY8P0CW00 308 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 GRPEL1Q9HAV7 217 aa8.46□□□□□ -1.05
SYNE2-205ENST00000394768 MRC2Q9UBG0 1479 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 TUBBP07437 444 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 KMT5BQ4FZB7 885 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 CDAN1Q8IWY9 1227 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 STIM2Q9P246 746 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 IVLP07476 585 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 NBPF8Q3BBV2 869 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 NBPF14Q5TI25 921 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC89Q8N998 374 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 UQCRHP07919 91 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 MAATS1Q7Z4T9 603 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 GSDMBQ8TAX9 411 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 MAK16Q9BXY0 300 aaKnown RBP8.46□□□□□ -1.06
SYNE2-205ENST00000394768 CALML3P27482 149 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 IARSP41252 1262 aaKnown RBP8.46□□□□□ -1.06
SYNE2-205ENST00000394768 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-205ENST00000394768 GLT8D2Q9H1C3 349 aa8.46□□□□□ -1.06
SYNE2-205ENST00000394768 LIG1P18858 919 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 GNAT2P19087 354 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 PDZRN3Q9UPQ7 1066 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 TRIM7Q9C029 511 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 KIF3CO14782 793 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 PRG4Q92954 1404 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-205ENST00000394768 PPP1R2P41236 205 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 NCOA7Q8NI08 942 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 GSTA5Q7RTV2 222 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 KIFAP3Q92845 792 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 TSGA10Q9BZW7 698 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 CWC25Q9NXE8 425 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-205ENST00000394768 PAXBP1Q9Y5B6 917 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 RRP9O43818 475 aaKnown RBP8.45□□□□□ -1.06
SYNE2-205ENST00000394768 MCM5P33992 734 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 BCL11BQ9C0K0 894 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-205ENST00000394768 SNAPC4Q5SXM2 1469 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 DKC1O60832 514 aaKnown RBP eCLIP8.45□□□□□ -1.06
SYNE2-205ENST00000394768 CRCPO75575 148 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 SH2D4BQ5SQS7 431 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 GPR161Q8N6U8 529 aaKnown RBP8.45□□□□□ -1.06
SYNE2-205ENST00000394768 ESR2Q92731 530 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 CABP1Q9NZU7 370 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 MUM1L1Q5H9M0 696 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 HS2ST1Q7LGA3 356 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC144CPQ8IYA2 1237 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 KCNG1Q9UIX4 513 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 HAUS7Q99871 368 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 FAM169AQ9Y6X4 670 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 RTL9Q8NET4 1388 aa8.45□□□□□ -1.06
SYNE2-205ENST00000394768 KIF11P52732 1056 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 TMEM132EQ6IEE7 984 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 STAT6P42226 847 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 RNF187Q5TA31 235 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC63Q8NA47 563 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 TMEM67Q5HYA8 995 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 HACE1Q8IYU2 909 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 PSMA7O14818 248 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 IDEP14735 1019 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 NBPF6Q5VWK0 638 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 NBPF5PQ86XG9 351 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-205ENST00000394768 NBPF4Q96M43 638 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 ITSN2Q9NZM3 1697 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 METAP2P50579 478 aaKnown RBP eCLIP8.44□□□□□ -1.06
SYNE2-205ENST00000394768 TRIM47Q96LD4 638 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 MSH6P52701 1360 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 CUL4BQ13620 913 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 CCDC125Q86Z20 511 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 C10orf67Q8IYJ2 551 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 INF2Q27J81 1249 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 CADPS2Q86UW7 1296 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 SMARCC2Q8TAQ2 1214 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 LIMCH1Q9UPQ0 1083 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 EYA3Q99504 573 aa8.44□□□□□ -1.06
SYNE2-205ENST00000394768 MTRF1LQ9UGC7 380 aaKnown RBP8.44□□□□□ -1.06
SYNE2-205ENST00000394768 RPL13P26373 211 aaKnown RBP8.43□□□□□ -1.06
SYNE2-205ENST00000394768 AKR1B10O60218 316 aa8.43□□□□□ -1.06
SYNE2-205ENST00000394768 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms