RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PARP4Q9UKK3 1724 aaKnown RBP8.65□□□□□ -1.02
RTN4-205ENST00000394609 GNAI2P04899 355 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 DDB1Q16531 1140 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 BEND3Q5T5X7 828 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 KSR2Q6VAB6 950 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 COPS6Q7L5N1 327 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 XAGE3Q8WTP9 111 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
RTN4-205ENST00000394609 RBM27Q9P2N5 1060 aaKnown RBP8.65□□□□□ -1.02
RTN4-205ENST00000394609 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
RTN4-205ENST00000394609 GNAI3P08754 354 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 PRIM1P49642 420 aaKnown RBP8.64□□□□□ -1.03
RTN4-205ENST00000394609 NUCB1Q02818 461 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 RIC3Q7Z5B4 369 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 ANKRD44Q8N8A2 993 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 BACH2Q9BYV9 841 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 ATG3Q9NT62 314 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 SIPA1L3O60292 1781 aaPredicted RBP8.64□□□□□ -1.03
RTN4-205ENST00000394609 GRXCR2A6NFK2 248 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 APBB1O00213 710 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 A1BGP04217 495 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 UBTFL1P0CB47 393 aaPredicted RBP8.64□□□□□ -1.03
RTN4-205ENST00000394609 CWF19L2Q2TBE0 894 aaKnown RBP8.64□□□□□ -1.03
RTN4-205ENST00000394609 CHD1LQ86WJ1 897 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 RPAP2Q8IXW5 612 aaPredicted RBP8.64□□□□□ -1.03
RTN4-205ENST00000394609 GCC1Q96CN9 775 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 CDCA7Q9BWT1 371 aaPredicted RBP8.64□□□□□ -1.03
RTN4-205ENST00000394609 LRRFIP2Q9Y608 721 aaKnown RBP8.64□□□□□ -1.03
RTN4-205ENST00000394609 SLIT2O94813 1529 aa8.64□□□□□ -1.03
RTN4-205ENST00000394609 ATP10DQ9P241 1426 aa8.63□□□□□ -1.03
RTN4-205ENST00000394609 DDX58O95786 925 aaKnown RBP8.63□□□□□ -1.03
RTN4-205ENST00000394609 NBPF7P0C2Y1 421 aaPredicted RBP8.63□□□□□ -1.03
RTN4-205ENST00000394609 NBPF14Q5TI25 921 aa8.63□□□□□ -1.03
RTN4-205ENST00000394609 NBPF10Q6P3W6 841 aaKnown RBP8.63□□□□□ -1.03
RTN4-205ENST00000394609 LRP10Q7Z4F1 713 aa8.63□□□□□ -1.03
RTN4-205ENST00000394609 NBPF15Q8N660 670 aa8.63□□□□□ -1.03
RTN4-205ENST00000394609 MARCH10Q8NA82 808 aaPredicted RBP8.63□□□□□ -1.03
RTN4-205ENST00000394609 ACSBG1Q96GR2 724 aa8.63□□□□□ -1.03
RTN4-205ENST00000394609 USP21Q9UK80 565 aa8.63□□□□□ -1.03
RTN4-205ENST00000394609 VIRMAQ69YN4 1812 aaKnown RBP8.62□□□□□ -1.03
RTN4-205ENST00000394609 PNMA6EA0A0J9YXQ4 647 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 LAPTM4AQ15012 233 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 MEX3CQ5U5Q3 659 aaKnown RBP8.62□□□□□ -1.03
RTN4-205ENST00000394609 BARGINQ6ZT62 677 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 FNBP4Q8N3X1 1017 aaPredicted RBP8.62□□□□□ -1.03
RTN4-205ENST00000394609 TATDN2Q93075 761 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 DCTPP1Q9H773 170 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 PNMA3Q9UL41 463 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 SPATA31A6Q5VVP1 1343 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 BCL9LQ86UU0 1499 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 VPS72Q15906 364 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 C8orf34Q49A92 452 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 SAMD7Q7Z3H4 446 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 C9orf78Q9NZ63 289 aaPredicted RBP8.62□□□□□ -1.03
RTN4-205ENST00000394609 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
RTN4-205ENST00000394609 PLCH1Q4KWH8 1693 aa8.61□□□□□ -1.03
RTN4-205ENST00000394609 SHANK3Q9BYB0 1731 aa8.61□□□□□ -1.03
RTN4-205ENST00000394609 SMARCA5O60264 1052 aaPredicted RBP8.61□□□□□ -1.03
RTN4-205ENST00000394609 HMMRO75330 724 aa8.61□□□□□ -1.03
RTN4-205ENST00000394609 DNAJC10Q8IXB1 793 aa8.61□□□□□ -1.03
RTN4-205ENST00000394609 LINS1Q8NG48 757 aa8.61□□□□□ -1.03
RTN4-205ENST00000394609 MYD88Q99836 296 aa8.61□□□□□ -1.03
RTN4-205ENST00000394609 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
RTN4-205ENST00000394609 LRP6O75581 1613 aa8.61□□□□□ -1.03
RTN4-205ENST00000394609 BCL9O00512 1426 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 IGKV5-2P06315 115 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 ATP8B2P98198 1209 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 TTLL7Q6ZT98 887 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
RTN4-205ENST00000394609 C16orf71Q8IYS4 520 aaPredicted RBP8.6□□□□□ -1.03
RTN4-205ENST00000394609 SLC4A9Q96Q91 983 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 KCPQ6ZWJ8 1503 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 PXDNLA1KZ92 1463 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 C5P01031 1676 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 ATP5J2-PTCD1G3V325 749 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 KCNQ2O43526 872 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 ALDH1L1O75891 902 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 NEXNQ0ZGT2 675 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 PPP1R42Q7Z4L9 355 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 IL27Q8NEV9 243 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 JARID2Q92833 1246 aaPredicted RBP8.6□□□□□ -1.03
RTN4-205ENST00000394609 ARXQ96QS3 562 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 METTL22Q9BUU2 404 aaPredicted RBP8.6□□□□□ -1.03
RTN4-205ENST00000394609 IL21Q9HBE4 155 aa8.6□□□□□ -1.03
RTN4-205ENST00000394609 NEURL1BA8MQ27 555 aa8.59□□□□□ -1.03
RTN4-205ENST00000394609 GRM8O00222 908 aa8.59□□□□□ -1.03
RTN4-205ENST00000394609 SRGAP3O43295 1099 aa8.59□□□□□ -1.03
RTN4-205ENST00000394609 STARD3NLO95772 234 aa8.59□□□□□ -1.03
RTN4-205ENST00000394609 PLBD2Q8NHP8 589 aa8.59□□□□□ -1.03
RTN4-205ENST00000394609 OTUD7AQ8TE49 926 aaPredicted RBP8.59□□□□□ -1.03
RTN4-205ENST00000394609 ZBTB3Q9H5J0 574 aa8.59□□□□□ -1.03
RTN4-205ENST00000394609 FAM198AQ9UFP1 575 aa8.59□□□□□ -1.03
RTN4-205ENST00000394609 ERBB4Q15303 1308 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 NRAPQ86VF7 1730 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 TOGARAM1Q9Y4F4 1720 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 SMAPO00193 183 aa8.58□□□□□ -1.04
RTN4-205ENST00000394609 OSBPP22059 807 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms