RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 UTYO14607 1347 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 SLC27A2O14975 620 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 OFD1O75665 1012 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 STK3Q13188 491 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 CYP46A1Q9Y6A2 500 aa16.15■□□□□ 0.18
GTF2F1-201ENST00000394456 NBPF26B4DH59 902 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 NBPF14Q5TI25 921 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 NBPF10Q6P3W6 841 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 CCDC129Q6ZRS4 1044 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 NBPF15Q8N660 670 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 ERVV-2B6SEH9 535 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 RUFY2Q8WXA3 655 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 SEC62Q99442 399 aaKnown RBP16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 UBR2Q8IWV8 1755 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 COL15A1P39059 1388 aa16.14■□□□□ 0.17
GTF2F1-201ENST00000394456 A1BGP04217 495 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 VPS53Q5VIR6 699 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 C17orf53Q8N3J3 647 aaPredicted RBP16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 HDAC5Q9UQL6 1122 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 ZKSCAN5Q9Y2L8 839 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 EPB41L2O43491 1005 aaKnown RBP16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 UBE3BQ7Z3V4 1068 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 MAP4K1Q92918 833 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 GPATCH3Q96I76 525 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
GTF2F1-201ENST00000394456 CDC37L1Q7L3B6 337 aa16.12■□□□□ 0.17
GTF2F1-201ENST00000394456 TFCP2Q12800 502 aa16.12■□□□□ 0.17
GTF2F1-201ENST00000394456 NKX1-1Q15270 411 aaPredicted RBP16.12■□□□□ 0.17
GTF2F1-201ENST00000394456 TTLL7Q6ZT98 887 aa16.12■□□□□ 0.17
GTF2F1-201ENST00000394456 ERC1Q8IUD2 1116 aa16.12■□□□□ 0.17
GTF2F1-201ENST00000394456 DBNLQ9UJU6 430 aaKnown RBP16.12■□□□□ 0.17
GTF2F1-201ENST00000394456 KCPQ6ZWJ8 1503 aa16.12■□□□□ 0.17
GTF2F1-201ENST00000394456 TMEM87AQ8NBN3 555 aa16.11■□□□□ 0.17
GTF2F1-201ENST00000394456 KCNB2Q92953 911 aa16.11■□□□□ 0.17
GTF2F1-201ENST00000394456 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
GTF2F1-201ENST00000394456 AP5Z1O43299 807 aa16.11■□□□□ 0.17
GTF2F1-201ENST00000394456 RBM10P98175 930 aaKnown RBP16.11■□□□□ 0.17
GTF2F1-201ENST00000394456 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
GTF2F1-201ENST00000394456 CCDC183Q5T5S1 534 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 SYAP1Q96A49 352 aaPredicted RBP16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 A0A087WZG4 1122 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 PPFIA3O75145 1194 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 PTMAP06454 111 aaKnown RBP16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 PLCB2Q00722 1185 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 LRRC2Q9BYS8 371 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 PAPPAQ13219 1627 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 UBE2HP62256 183 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 TOB2Q14106 344 aaPredicted RBP16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 DNAJC2Q99543 621 aaKnown RBP16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 TFIP11Q9UBB9 837 aaKnown RBP16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 ZNF330Q9Y3S2 320 aaPredicted RBP16.1■□□□□ 0.17
GTF2F1-201ENST00000394456 A0A0G2JLW4 131 aa16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 ZNF500O60304 480 aaPredicted RBP16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 PTPN12Q05209 780 aaKnown RBP16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 ZBTB3Q9H5J0 574 aa16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 RFX5P48382 616 aaPredicted RBP16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 HS1BP3Q53T59 392 aa16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 TTC6Q86TZ1 520 aa16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 TTC12Q9H892 705 aaPredicted RBP16.09■□□□□ 0.17
GTF2F1-201ENST00000394456 JAK2O60674 1132 aa16.08■□□□□ 0.16
GTF2F1-201ENST00000394456 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
GTF2F1-201ENST00000394456 TM6SF1Q9BZW5 370 aa16.08■□□□□ 0.16
GTF2F1-201ENST00000394456 CAMK4Q16566 473 aa16.08■□□□□ 0.16
GTF2F1-201ENST00000394456 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
GTF2F1-201ENST00000394456 CCDC39Q9UFE4 941 aa16.08■□□□□ 0.16
GTF2F1-201ENST00000394456 ASAP1Q9ULH1 1129 aa16.08■□□□□ 0.16
GTF2F1-201ENST00000394456 TAF5LO75529 589 aa16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 ADCY5O95622 1261 aa16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 LIG1P18858 919 aa16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 FOSBP53539 338 aa16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 MED23Q9ULK4 1368 aa16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 BLOC1S2Q6QNY1 142 aa16.07■□□□□ 0.16
GTF2F1-201ENST00000394456 NUP188Q5SRE5 1749 aa16.06■□□□□ 0.16
GTF2F1-201ENST00000394456 ITGB4P16144 1822 aa16.06■□□□□ 0.16
GTF2F1-201ENST00000394456 TNNI3KQ59H18 835 aa16.06■□□□□ 0.16
GTF2F1-201ENST00000394456 FUCA2Q9BTY2 467 aa16.06■□□□□ 0.16
GTF2F1-201ENST00000394456 FPGT-TNNI3KV9GXZ4 949 aa16.06■□□□□ 0.16
GTF2F1-201ENST00000394456 RPS6KB1P23443 525 aa16.06■□□□□ 0.16
GTF2F1-201ENST00000394456 PIGBQ92521 554 aa16.06■□□□□ 0.16
GTF2F1-201ENST00000394456 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.05■□□□□ 0.16
GTF2F1-201ENST00000394456 SH2B1Q9NRF2 756 aaPredicted RBP16.05■□□□□ 0.16
GTF2F1-201ENST00000394456 TNS2Q63HR2 1409 aa16.05■□□□□ 0.16
GTF2F1-201ENST00000394456 PHF14O94880 888 aa16.05■□□□□ 0.16
GTF2F1-201ENST00000394456 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
GTF2F1-201ENST00000394456 ZNF609O15014 1411 aa16.05■□□□□ 0.16
GTF2F1-201ENST00000394456 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.04■□□□□ 0.16
GTF2F1-201ENST00000394456 CASP7P55210 303 aa16.04■□□□□ 0.16
GTF2F1-201ENST00000394456 COL14A1Q05707 1796 aaKnown RBP16.04■□□□□ 0.16
GTF2F1-201ENST00000394456 LMBR1LQ6UX01 489 aa16.04■□□□□ 0.16
GTF2F1-201ENST00000394456 DNAJC10Q8IXB1 793 aa16.04■□□□□ 0.16
GTF2F1-201ENST00000394456 COL16A1Q07092 1604 aaPredicted RBP16.04■□□□□ 0.16
GTF2F1-201ENST00000394456 ADAMTS2O95450 1211 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms