RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 NUTM1Q86Y26 1132 aa22.16■■□□□ 1.14
HOXC6-202ENST00000394331 MRFAP1L1Q96HT8 127 aa22.16■■□□□ 1.14
HOXC6-202ENST00000394331 NBPF7P0C2Y1 421 aaPredicted RBP22.15■■□□□ 1.14
HOXC6-202ENST00000394331 DBF4Q9UBU7 674 aaPredicted RBP22.15■■□□□ 1.14
HOXC6-202ENST00000394331 NCAPD2Q15021 1401 aa22.15■■□□□ 1.14
HOXC6-202ENST00000394331 C1orf141Q5JVX7 400 aa22.15■■□□□ 1.14
HOXC6-202ENST00000394331 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
HOXC6-202ENST00000394331 SMC3Q9UQE7 1217 aa22.15■■□□□ 1.14
HOXC6-202ENST00000394331 ANO6Q4KMQ2 910 aa22.14■■□□□ 1.14
HOXC6-202ENST00000394331 BRMS1Q9HCU9 246 aa22.14■■□□□ 1.14
HOXC6-202ENST00000394331 CWC15Q9P013 229 aaKnown RBP22.14■■□□□ 1.14
HOXC6-202ENST00000394331 LIMCH1Q9UPQ0 1083 aa22.14■■□□□ 1.14
HOXC6-202ENST00000394331 PHRF1Q9P1Y6 1649 aaKnown RBP22.14■■□□□ 1.14
HOXC6-202ENST00000394331 KCNQ3O43525 872 aa22.14■■□□□ 1.13
HOXC6-202ENST00000394331 DNM1Q05193 864 aaKnown RBP22.14■■□□□ 1.13
HOXC6-202ENST00000394331 CCDC144BQ3MJ40 725 aa22.14■■□□□ 1.13
HOXC6-202ENST00000394331 CCDC144CPQ8IYA2 1237 aa22.14■■□□□ 1.13
HOXC6-202ENST00000394331 LRRC59Q96AG4 307 aaKnown RBP22.14■■□□□ 1.13
HOXC6-202ENST00000394331 HDAC5Q9UQL6 1122 aa22.14■■□□□ 1.13
HOXC6-202ENST00000394331 MTMR6Q9Y217 621 aa22.14■■□□□ 1.13
HOXC6-202ENST00000394331 DHX16O60231 1041 aaKnown RBP22.13■■□□□ 1.13
HOXC6-202ENST00000394331 GCP02774 474 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 CASQ1P31415 396 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 CLCN6P51797 869 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 GPS2Q13227 327 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 ARHGEF25Q86VW2 580 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 DDX19AQ9NUU7 478 aaKnown RBP22.13■■□□□ 1.13
HOXC6-202ENST00000394331 KDM3BQ7LBC6 1761 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 RNMTO43148 476 aaKnown RBP22.13■■□□□ 1.13
HOXC6-202ENST00000394331 MPRIPQ6WCQ1 1025 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 NFATC2IPQ8NCF5 419 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 PI4K2BQ8TCG2 481 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.13■■□□□ 1.13
HOXC6-202ENST00000394331 CCAR2Q8N163 923 aaKnown RBP22.13■■□□□ 1.13
HOXC6-202ENST00000394331 OVOS2A0A0G2JMS6 1433 aa22.13■■□□□ 1.13
HOXC6-202ENST00000394331 CCDC93Q567U6 631 aa22.12■■□□□ 1.13
HOXC6-202ENST00000394331 TRERF1Q96PN7 1200 aa22.12■■□□□ 1.13
HOXC6-202ENST00000394331 FILIP1Q7Z7B0 1213 aa22.12■■□□□ 1.13
HOXC6-202ENST00000394331 CNTROBQ8N137 903 aa22.12■■□□□ 1.13
HOXC6-202ENST00000394331 GTF3C6Q969F1 213 aa22.12■■□□□ 1.13
HOXC6-202ENST00000394331 ARGLU1Q9NWB6 273 aaPredicted RBP22.12■■□□□ 1.13
HOXC6-202ENST00000394331 LMO7Q8WWI1 1683 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 USP27XA6NNY8 438 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 ALDH1L1O75891 902 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 CERS3Q8IU89 383 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 ADCY9O60503 1353 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 MTX1Q13505 466 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 SYT10Q6XYQ8 523 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 TNMDQ9H2S6 317 aa22.11■■□□□ 1.13
HOXC6-202ENST00000394331 MYO1CO00159 1063 aa22.1■■□□□ 1.13
HOXC6-202ENST00000394331 ATG3Q9NT62 314 aa22.1■■□□□ 1.13
HOXC6-202ENST00000394331 ICE2Q659A1 982 aa22.1■■□□□ 1.13
HOXC6-202ENST00000394331 IQUBQ8NA54 791 aa22.1■■□□□ 1.13
HOXC6-202ENST00000394331 SKILP12757 684 aa22.1■■□□□ 1.13
HOXC6-202ENST00000394331 SECISBP2LQ93073 1101 aaKnown RBP22.1■■□□□ 1.13
HOXC6-202ENST00000394331 PSD3Q9NYI0 1048 aa22.1■■□□□ 1.13
HOXC6-202ENST00000394331 TTC41PQ6P2S7 1318 aa22.09■■□□□ 1.13
HOXC6-202ENST00000394331 USP42Q9H9J4 1324 aaKnown RBP22.09■■□□□ 1.13
HOXC6-202ENST00000394331 SGSM2O43147 1006 aa22.09■■□□□ 1.13
HOXC6-202ENST00000394331 CCZ1BP86790 482 aa22.09■■□□□ 1.13
HOXC6-202ENST00000394331 CCZ1P86791 482 aaPredicted RBP22.09■■□□□ 1.13
HOXC6-202ENST00000394331 CLSTN2Q9H4D0 955 aa22.09■■□□□ 1.13
HOXC6-202ENST00000394331 KRT85P78386 507 aa22.09■■□□□ 1.13
HOXC6-202ENST00000394331 KRBA2Q6ZNG9 492 aa22.09■■□□□ 1.13
HOXC6-202ENST00000394331 GIGYF1O75420 1035 aaPredicted RBP22.08■■□□□ 1.13
HOXC6-202ENST00000394331 ANKRD24Q8TF21 1146 aa22.08■■□□□ 1.13
HOXC6-202ENST00000394331 ANXA1P04083 346 aa22.08■■□□□ 1.12
HOXC6-202ENST00000394331 KCNJ6P48051 423 aa22.08■■□□□ 1.12
HOXC6-202ENST00000394331 ZNF165P49910 485 aa22.08■■□□□ 1.12
HOXC6-202ENST00000394331 OS9Q13438 667 aaPredicted RBP22.08■■□□□ 1.12
HOXC6-202ENST00000394331 KSR2Q6VAB6 950 aa22.08■■□□□ 1.12
HOXC6-202ENST00000394331 RUFY3Q7L099 469 aa22.08■■□□□ 1.12
HOXC6-202ENST00000394331 GLRX3O76003 335 aaKnown RBP22.07■■□□□ 1.12
HOXC6-202ENST00000394331 AK2P54819 239 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 TMCO3Q6UWJ1 677 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 NEK11Q8NG66 645 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 GOLGA5Q8TBA6 731 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 C9orf78Q9NZ63 289 aaPredicted RBP22.07■■□□□ 1.12
HOXC6-202ENST00000394331 SLIT3O75094 1523 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 GTF2A1P52655 376 aaPredicted RBP22.07■■□□□ 1.12
HOXC6-202ENST00000394331 ZSCAN26Q16670 478 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 ERCC6LQ2NKX8 1250 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 TTC6Q86TZ1 520 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
HOXC6-202ENST00000394331 ORAI2Q96SN7 254 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 MAP3K2Q9Y2U5 619 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 HEG1Q9ULI3 1381 aa22.07■■□□□ 1.12
HOXC6-202ENST00000394331 ZNF142P52746 1687 aaPredicted RBP22.06■■□□□ 1.12
HOXC6-202ENST00000394331 LIG1P18858 919 aa22.06■■□□□ 1.12
HOXC6-202ENST00000394331 ZSCAN31Q96LW9 406 aaPredicted RBP22.06■■□□□ 1.12
HOXC6-202ENST00000394331 IL25Q9H293 177 aa22.06■■□□□ 1.12
HOXC6-202ENST00000394331 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
HOXC6-202ENST00000394331 MAP4K4O95819 1239 aaPredicted RBP22.06■■□□□ 1.12
HOXC6-202ENST00000394331 ERC1Q8IUD2 1116 aa22.06■■□□□ 1.12
HOXC6-202ENST00000394331 GOLGA6L1Q8N7Z2 621 aa22.06■■□□□ 1.12
HOXC6-202ENST00000394331 SH2B1Q9NRF2 756 aaPredicted RBP22.06■■□□□ 1.12
HOXC6-202ENST00000394331 HYPKQ9NX55 129 aa22.06■■□□□ 1.12
HOXC6-202ENST00000394331 TPM1P09493 284 aa22.05■■□□□ 1.12
HOXC6-202ENST00000394331 SRLQ86TD4 932 aa22.05■■□□□ 1.12
HOXC6-202ENST00000394331 TRHP20396 242 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms