RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 KDM3BQ7LBC6 1761 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 CCDC30Q5VVM6 783 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 IFNL2Q8IZJ0 200 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 CERKQ8TCT0 537 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 RBM27Q9P2N5 1060 aaKnown RBP7.35□□□□□ -1.23
CASC3-202ENST00000394114 BOLA1Q9Y3E2 137 aa7.35□□□□□ -1.23
CASC3-202ENST00000394114 RGS12O14924 1447 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 ZBTB7BO15156 539 aaPredicted RBP7.34□□□□□ -1.23
CASC3-202ENST00000394114 SERPINB4P48594 390 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 FKBP5Q13451 457 aaPredicted RBP7.34□□□□□ -1.23
CASC3-202ENST00000394114 GIMAP6Q6P9H5 292 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 PTCD2Q8WV60 388 aaKnown RBP7.34□□□□□ -1.23
CASC3-202ENST00000394114 ABCC6O95255 1503 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 SCN11AQ9UI33 1791 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 PHLPP1O60346 1717 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 TIE1P35590 1138 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 CTDSPL2Q05D32 466 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 FBXO33Q7Z6M2 555 aa7.34□□□□□ -1.23
CASC3-202ENST00000394114 RWDD1Q9H446 243 aaPredicted RBP7.34□□□□□ -1.23
CASC3-202ENST00000394114 PHAXQ9H814 394 aaKnown RBP7.34□□□□□ -1.23
CASC3-202ENST00000394114 IL2RBP14784 551 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 CHRDL2Q6WN34 429 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 ZCRB1Q8TBF4 217 aaKnown RBP7.33□□□□□ -1.24
CASC3-202ENST00000394114 ZBTB3Q9H5J0 574 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 CHPF2Q9P2E5 772 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 AHDC1Q5TGY3 1603 aaPredicted RBP7.33□□□□□ -1.24
CASC3-202ENST00000394114 SIPA1L3O60292 1781 aaPredicted RBP7.33□□□□□ -1.24
CASC3-202ENST00000394114 TOM1O60784 492 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 AAMPQ13685 434 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 SLC52A2Q9HAB3 445 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 BABAM1Q9NWV8 329 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 PTPRCP08575 1304 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 OVOS2A0A0G2JMS6 1433 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 PKD1L3Q7Z443 1732 aa7.33□□□□□ -1.24
CASC3-202ENST00000394114 MEIS3Q99687 375 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 CARD10Q9BWT7 1032 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 CACNA1FO60840 1977 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 PARP4Q9UKK3 1724 aaKnown RBP7.32□□□□□ -1.24
CASC3-202ENST00000394114 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.32□□□□□ -1.24
CASC3-202ENST00000394114 CABP4P57796 275 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 ZNF790Q6PG37 636 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
CASC3-202ENST00000394114 MS4A3Q96HJ5 214 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 DCAF5Q96JK2 942 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 PDZRN3Q9UPQ7 1066 aa7.32□□□□□ -1.24
CASC3-202ENST00000394114 COL16A1Q07092 1604 aaPredicted RBP7.32□□□□□ -1.24
CASC3-202ENST00000394114 GIGYF1O75420 1035 aaPredicted RBP7.31□□□□□ -1.24
CASC3-202ENST00000394114 HSPA1LP34931 641 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 PIP4K2AP48426 406 aaPredicted RBP7.31□□□□□ -1.24
CASC3-202ENST00000394114 PROSER3Q2NL68 480 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 INTS3Q68E01 1043 aaKnown RBP7.31□□□□□ -1.24
CASC3-202ENST00000394114 TYW1BQ6NUM6 668 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 TMEM92Q6UXU6 159 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 ZNF496Q96IT1 587 aaPredicted RBP7.31□□□□□ -1.24
CASC3-202ENST00000394114 PCDH11XQ9BZA7 1347 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 PCDH11YQ9BZA8 1340 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 SULF1Q8IWU6 871 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 CLP1Q92989 425 aaKnown RBP7.31□□□□□ -1.24
CASC3-202ENST00000394114 ADAMTS7Q9UKP4 1686 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 SIRT2Q8IXJ6 389 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 TTC5Q8N0Z6 440 aa7.31□□□□□ -1.24
CASC3-202ENST00000394114 BIN2Q9UBW5 565 aaPredicted RBP7.31□□□□□ -1.24
CASC3-202ENST00000394114 GOLGB1Q14789 3259 aaKnown RBP7.3□□□□□ -1.24
CASC3-202ENST00000394114 TAGLNQ01995 201 aaKnown RBP7.3□□□□□ -1.24
CASC3-202ENST00000394114 AIMP1Q12904 312 aaKnown RBP7.3□□□□□ -1.24
CASC3-202ENST00000394114 HDAC1Q13547 482 aaPredicted RBP7.3□□□□□ -1.24
CASC3-202ENST00000394114 DPH6Q7L8W6 267 aa7.3□□□□□ -1.24
CASC3-202ENST00000394114 CERS3Q8IU89 383 aa7.3□□□□□ -1.24
CASC3-202ENST00000394114 COL14A1Q05707 1796 aaKnown RBP7.3□□□□□ -1.24
CASC3-202ENST00000394114 C5P01031 1676 aa7.3□□□□□ -1.24
CASC3-202ENST00000394114 SHANK3Q9BYB0 1731 aa7.3□□□□□ -1.24
CASC3-202ENST00000394114 HSP90AB1P08238 724 aaKnown RBP7.3□□□□□ -1.24
CASC3-202ENST00000394114 MYL6BP14649 208 aa7.3□□□□□ -1.24
CASC3-202ENST00000394114 EPS8L1Q8TE68 723 aa7.3□□□□□ -1.24
CASC3-202ENST00000394114 LRRN4Q8WUT4 740 aa7.3□□□□□ -1.24
CASC3-202ENST00000394114 COL22A1Q8NFW1 1626 aaPredicted RBP7.29□□□□□ -1.24
CASC3-202ENST00000394114 A0A0G2JS52 829 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 PI4KAP2A4QPH2 592 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 FAM196BA6NMK8 535 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 PTCD1O75127 700 aaKnown RBP7.29□□□□□ -1.24
CASC3-202ENST00000394114 RBM10P98175 930 aaKnown RBP7.29□□□□□ -1.24
CASC3-202ENST00000394114 PI4KAP1Q8N8J0 262 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 CHMP4BQ9H444 224 aaKnown RBP7.29□□□□□ -1.24
CASC3-202ENST00000394114 PLCH1Q4KWH8 1693 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 CCT4P50991 539 aaKnown RBP7.29□□□□□ -1.24
CASC3-202ENST00000394114 BACH2Q9BYV9 841 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 DBF4Q9UBU7 674 aaPredicted RBP7.29□□□□□ -1.24
CASC3-202ENST00000394114 USP16Q9Y5T5 823 aa7.29□□□□□ -1.24
CASC3-202ENST00000394114 SOS1Q07889 1333 aaPredicted RBP7.29□□□□□ -1.24
CASC3-202ENST00000394114 HOXB7P09629 217 aa7.28□□□□□ -1.24
CASC3-202ENST00000394114 DEKP35659 375 aaKnown RBP7.28□□□□□ -1.24
CASC3-202ENST00000394114 SMC5Q8IY18 1101 aa7.28□□□□□ -1.24
CASC3-202ENST00000394114 HEG1Q9ULI3 1381 aa7.28□□□□□ -1.24
CASC3-202ENST00000394114 RCCD1A6NED2 376 aa7.28□□□□□ -1.24
CASC3-202ENST00000394114 ANKRD45Q5TZF3 282 aa7.28□□□□□ -1.24
CASC3-202ENST00000394114 SYTL4Q96C24 671 aaPredicted RBP7.28□□□□□ -1.24
CASC3-202ENST00000394114 KDM4AO75164 1064 aa7.27□□□□□ -1.25
CASC3-202ENST00000394114 ERCC5P28715 1186 aaPredicted RBP7.27□□□□□ -1.25
CASC3-202ENST00000394114 FXR2P51116 673 aaKnown RBP eCLIP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms