RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CWF19L2Q2TBE0 894 aaKnown RBP39.29■■■■□ 3.88
CMTM4-202ENST00000394106 E9PSI1 815 aa39.28■■■■□ 3.88
CMTM4-202ENST00000394106 TOMM70O94826 608 aa39.28■■■■□ 3.88
CMTM4-202ENST00000394106 SP8Q8IXZ3 490 aa39.27■■■■□ 3.88
CMTM4-202ENST00000394106 NEURL1BA8MQ27 555 aa39.26■■■■□ 3.88
CMTM4-202ENST00000394106 MIER1Q8N108 512 aa39.26■■■■□ 3.88
CMTM4-202ENST00000394106 DNAAF4Q8WXU2 420 aa39.26■■■■□ 3.88
CMTM4-202ENST00000394106 CELF1Q92879 486 aaKnown RBP39.25■■■■□ 3.87
CMTM4-202ENST00000394106 PDE8AO60658 829 aa39.24■■■■□ 3.87
CMTM4-202ENST00000394106 DDNO94850 711 aaPredicted RBP39.24■■■■□ 3.87
CMTM4-202ENST00000394106 VEGFAP15692 232 aaPredicted RBP39.24■■■■□ 3.87
CMTM4-202ENST00000394106 WDR90Q96KV7 1748 aa39.23■■■■□ 3.87
CMTM4-202ENST00000394106 SLFN5Q08AF3 891 aa39.23■■■■□ 3.87
CMTM4-202ENST00000394106 JDP2Q8WYK2 163 aa39.23■■■■□ 3.87
CMTM4-202ENST00000394106 CDHR2Q9BYE9 1310 aa39.22■■■■□ 3.87
CMTM4-202ENST00000394106 DPP8Q6V1X1 898 aaPredicted RBP39.22■■■■□ 3.87
CMTM4-202ENST00000394106 TMC4Q7Z404 712 aa39.22■■■■□ 3.87
CMTM4-202ENST00000394106 ZNF541Q9H0D2 1346 aa39.21■■■■□ 3.87
CMTM4-202ENST00000394106 LARGE2Q8N3Y3 721 aa39.21■■■■□ 3.87
CMTM4-202ENST00000394106 MPNDQ8N594 471 aa39.21■■■■□ 3.87
CMTM4-202ENST00000394106 CDCA7LQ96GN5 454 aa39.21■■■■□ 3.87
CMTM4-202ENST00000394106 CCDC85AQ96PX6 553 aaPredicted RBP39.21■■■■□ 3.87
CMTM4-202ENST00000394106 COL4A1P02462 1669 aa39.21■■■■□ 3.87
CMTM4-202ENST00000394106 COL4A5P29400 1685 aa39.19■■■■□ 3.86
CMTM4-202ENST00000394106 F6X3S4 739 aa39.19■■■■□ 3.86
CMTM4-202ENST00000394106 CCDC152Q4G0S7 254 aa39.19■■■■□ 3.86
CMTM4-202ENST00000394106 RBM46Q8TBY0 533 aaKnown RBP39.19■■■■□ 3.86
CMTM4-202ENST00000394106 UBE3BQ7Z3V4 1068 aa39.18■■■■□ 3.86
CMTM4-202ENST00000394106 SUPT20HQ8NEM7 779 aa39.18■■■■□ 3.86
CMTM4-202ENST00000394106 LINS1Q8NG48 757 aa39.18■■■■□ 3.86
CMTM4-202ENST00000394106 SEC31BQ9NQW1 1179 aa39.18■■■■□ 3.86
CMTM4-202ENST00000394106 LRRC37AA6NMS7 1700 aa39.17■■■■□ 3.86
CMTM4-202ENST00000394106 POTECB2RU33 542 aa39.17■■■■□ 3.86
CMTM4-202ENST00000394106 PPIP5K2O43314 1243 aa39.17■■■■□ 3.86
CMTM4-202ENST00000394106 GCKRQ14397 625 aa39.17■■■■□ 3.86
CMTM4-202ENST00000394106 FZD9O00144 591 aa39.16■■■■□ 3.86
CMTM4-202ENST00000394106 RPS8P62241 208 aaKnown RBP39.16■■■■□ 3.86
CMTM4-202ENST00000394106 AOC3Q16853 763 aa39.16■■■■□ 3.86
CMTM4-202ENST00000394106 RTFDC1Q9BY42 306 aaPredicted RBP39.16■■■■□ 3.86
CMTM4-202ENST00000394106 H7C1W4 665 aa39.14■■■■□ 3.86
CMTM4-202ENST00000394106 CTSWP56202 376 aa39.14■■■■□ 3.86
CMTM4-202ENST00000394106 NIM1KQ8IY84 436 aa39.14■■■■□ 3.86
CMTM4-202ENST00000394106 MYH3P11055 1940 aa39.13■■■■□ 3.85
CMTM4-202ENST00000394106 HSPA6P17066 643 aa39.12■■■■□ 3.85
CMTM4-202ENST00000394106 EIF6P56537 245 aaKnown RBP39.12■■■■□ 3.85
CMTM4-202ENST00000394106 VPS33BQ9H267 617 aa39.11■■■■□ 3.85
CMTM4-202ENST00000394106 NSFL1CQ9UNZ2 370 aaKnown RBP39.11■■■■□ 3.85
CMTM4-202ENST00000394106 DUOX1Q9NRD9 1551 aa39.09■■■■□ 3.85
CMTM4-202ENST00000394106 BEND3Q5T5X7 828 aa39.09■■■■□ 3.85
CMTM4-202ENST00000394106 TTLL11Q8NHH1 800 aa39.09■■■■□ 3.85
CMTM4-202ENST00000394106 L3MBTL3Q96JM7 780 aaPredicted RBP39.09■■■■□ 3.85
CMTM4-202ENST00000394106 GPSM2P81274 684 aa39.08■■■■□ 3.85
CMTM4-202ENST00000394106 MRPL50Q8N5N7 158 aaKnown RBP39.08■■■■□ 3.85
CMTM4-202ENST00000394106 FSTL1Q12841 308 aa39.07■■■■□ 3.85
CMTM4-202ENST00000394106 SLC4A10Q6U841 1118 aa39.07■■■■□ 3.85
CMTM4-202ENST00000394106 GPC2Q8N158 579 aa39.07■■■■□ 3.85
CMTM4-202ENST00000394106 SMC1BQ8NDV3 1235 aa39.07■■■■□ 3.85
CMTM4-202ENST00000394106 GJA3Q9Y6H8 435 aa39.07■■■■□ 3.85
CMTM4-202ENST00000394106 IQCA1LA6NCM1 817 aa39.06■■■■□ 3.84
CMTM4-202ENST00000394106 ANKRD18AQ8IVF6 992 aa39.06■■■■□ 3.84
CMTM4-202ENST00000394106 TRMT2AQ8IZ69 625 aaKnown RBP39.06■■■■□ 3.84
CMTM4-202ENST00000394106 GREM2Q9H772 168 aa39.06■■■■□ 3.84
CMTM4-202ENST00000394106 CASP7P55210 303 aa39.05■■■■□ 3.84
CMTM4-202ENST00000394106 KIAA2012Q0VF49 1180 aa39.05■■■■□ 3.84
CMTM4-202ENST00000394106 SSH1Q8WYL5 1049 aa39.05■■■■□ 3.84
CMTM4-202ENST00000394106 SCN4AP35499 1836 aa39.05■■■■□ 3.84
CMTM4-202ENST00000394106 C6orf229H3BNL8 230 aa39.04■■■■□ 3.84
CMTM4-202ENST00000394106 BCL2L13Q9BXK5 485 aa39.04■■■■□ 3.84
CMTM4-202ENST00000394106 CDC5LQ99459 802 aaKnown RBP39.03■■■■□ 3.84
CMTM4-202ENST00000394106 PLA2G12BQ9BX93 195 aa39.03■■■■□ 3.84
CMTM4-202ENST00000394106 POLLQ9UGP5 575 aa39.02■■■■□ 3.84
CMTM4-202ENST00000394106 ZNRF3Q9ULT6 936 aa39.02■■■■□ 3.84
CMTM4-202ENST00000394106 SPEF2Q9C093 1822 aa39.01■■■■□ 3.84
CMTM4-202ENST00000394106 LTBP1Q14766 1721 aa39.01■■■■□ 3.84
CMTM4-202ENST00000394106 ANKIB1Q9P2G1 1089 aa39.01■■■■□ 3.84
CMTM4-202ENST00000394106 HACL1Q9UJ83 578 aa39.01■■■■□ 3.84
CMTM4-202ENST00000394106 RTL9Q8NET4 1388 aa39■■■■□ 3.83
CMTM4-202ENST00000394106 WASHC4Q2M389 1173 aa39■■■■□ 3.83
CMTM4-202ENST00000394106 TAF1DQ9H5J8 278 aaPredicted RBP39■■■■□ 3.83
CMTM4-202ENST00000394106 RIMBP2O15034 1052 aa38.99■■■■□ 3.83
CMTM4-202ENST00000394106 SRCIN1Q9C0H9 1055 aa38.99■■■■□ 3.83
CMTM4-202ENST00000394106 TBC1D16Q8TBP0 767 aa38.98■■■■□ 3.83
CMTM4-202ENST00000394106 ALDH1L1O75891 902 aa38.97■■■■□ 3.83
CMTM4-202ENST00000394106 ALDH1L2Q3SY69 923 aa38.97■■■■□ 3.83
CMTM4-202ENST00000394106 GPR101Q96P66 508 aaPredicted RBP38.97■■■■□ 3.83
CMTM4-202ENST00000394106 EYA3Q99504 573 aa38.97■■■■□ 3.83
CMTM4-202ENST00000394106 PTPRCP08575 1304 aa38.96■■■■□ 3.83
CMTM4-202ENST00000394106 GRM8O00222 908 aa38.96■■■■□ 3.83
CMTM4-202ENST00000394106 POTEIP0CG38 1075 aa38.96■■■■□ 3.83
CMTM4-202ENST00000394106 POTEJP0CG39 1038 aa38.96■■■■□ 3.83
CMTM4-202ENST00000394106 FAM161AQ3B820 660 aa38.96■■■■□ 3.83
CMTM4-202ENST00000394106 SMC4Q9NTJ3 1288 aa38.96■■■■□ 3.83
CMTM4-202ENST00000394106 PODXL2Q9NZ53 605 aa38.96■■■■□ 3.83
CMTM4-202ENST00000394106 C9orf78Q9NZ63 289 aaPredicted RBP38.96■■■■□ 3.83
CMTM4-202ENST00000394106 UFL1O94874 794 aa38.95■■■■□ 3.83
CMTM4-202ENST00000394106 EPHX2P34913 555 aa38.95■■■■□ 3.83
CMTM4-202ENST00000394106 CXCL9Q07325 125 aa38.95■■■■□ 3.83
CMTM4-202ENST00000394106 EAPPQ56P03 285 aaPredicted RBP38.95■■■■□ 3.83
CMTM4-202ENST00000394106 GGA1Q9UJY5 639 aa38.95■■■■□ 3.83
CMTM4-202ENST00000394106 ITGA6P23229 1130 aa38.94■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms