RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ARHGAP45Q92619 1136 aa24.04■■□□□ 1.44
PDLIM7-204ENST00000393546 GRM8O00222 908 aa24.03■■□□□ 1.44
PDLIM7-204ENST00000393546 BCAR3O75815 825 aa24.03■■□□□ 1.44
PDLIM7-204ENST00000393546 RTKN2Q8IZC4 609 aa24.03■■□□□ 1.44
PDLIM7-204ENST00000393546 CASP7P55210 303 aa24.02■■□□□ 1.44
PDLIM7-204ENST00000393546 CTSWP56202 376 aa24.02■■□□□ 1.44
PDLIM7-204ENST00000393546 PLA2G12BQ9BX93 195 aa24.02■■□□□ 1.44
PDLIM7-204ENST00000393546 NFKBIEO00221 500 aa24.01■■□□□ 1.43
PDLIM7-204ENST00000393546 RASSF7Q02833 373 aa24.01■■□□□ 1.43
PDLIM7-204ENST00000393546 GRIPAP1Q4V328 841 aa24.01■■□□□ 1.43
PDLIM7-204ENST00000393546 C9orf131Q5VYM1 1079 aa24.01■■□□□ 1.43
PDLIM7-204ENST00000393546 OLFM4Q6UX06 510 aa24.01■■□□□ 1.43
PDLIM7-204ENST00000393546 CCT4P50991 539 aaKnown RBP24■■□□□ 1.43
PDLIM7-204ENST00000393546 TMC4Q7Z404 712 aa24■■□□□ 1.43
PDLIM7-204ENST00000393546 TTLL11Q8NHH1 800 aa24■■□□□ 1.43
PDLIM7-204ENST00000393546 FRAT1Q92837 279 aaPredicted RBP24■■□□□ 1.43
PDLIM7-204ENST00000393546 CCDC85AQ96PX6 553 aaPredicted RBP24■■□□□ 1.43
PDLIM7-204ENST00000393546 TAOK3Q9H2K8 898 aa24■■□□□ 1.43
PDLIM7-204ENST00000393546 ATP6V0A2Q9Y487 856 aa24■■□□□ 1.43
PDLIM7-204ENST00000393546 LMNB1P20700 586 aa23.99■■□□□ 1.43
PDLIM7-204ENST00000393546 RPS8P62241 208 aaKnown RBP23.99■■□□□ 1.43
PDLIM7-204ENST00000393546 SP8Q8IXZ3 490 aa23.99■■□□□ 1.43
PDLIM7-204ENST00000393546 LTBP3Q9NS15 1303 aa23.99■■□□□ 1.43
PDLIM7-204ENST00000393546 FER1L6Q2WGJ9 1857 aa23.98■■□□□ 1.43
PDLIM7-204ENST00000393546 CELF1Q92879 486 aaKnown RBP23.98■■□□□ 1.43
PDLIM7-204ENST00000393546 YTHDC1Q96MU7 727 aaKnown RBP23.98■■□□□ 1.43
PDLIM7-204ENST00000393546 SEC31BQ9NQW1 1179 aa23.98■■□□□ 1.43
PDLIM7-204ENST00000393546 RNF181Q9P0P0 153 aa23.98■■□□□ 1.43
PDLIM7-204ENST00000393546 FKBP4Q02790 459 aaKnown RBP eCLIP23.97■■□□□ 1.43
PDLIM7-204ENST00000393546 MYH3P11055 1940 aa23.96■■□□□ 1.43
PDLIM7-204ENST00000393546 SBF1O95248 1867 aa23.96■■□□□ 1.43
PDLIM7-204ENST00000393546 TAF1P21675 1872 aa23.96■■□□□ 1.43
PDLIM7-204ENST00000393546 CSF1RP07333 972 aa23.96■■□□□ 1.43
PDLIM7-204ENST00000393546 ATF7IPQ6VMQ6 1270 aa23.96■■□□□ 1.43
PDLIM7-204ENST00000393546 UTYO14607 1347 aa23.95■■□□□ 1.42
PDLIM7-204ENST00000393546 ZKSCAN2Q63HK3 967 aa23.95■■□□□ 1.42
PDLIM7-204ENST00000393546 CDC5LQ99459 802 aaKnown RBP23.95■■□□□ 1.42
PDLIM7-204ENST00000393546 GREM2Q9H772 168 aa23.95■■□□□ 1.42
PDLIM7-204ENST00000393546 NBPF7P0C2Y1 421 aaPredicted RBP23.94■■□□□ 1.42
PDLIM7-204ENST00000393546 PRELPP51888 382 aa23.94■■□□□ 1.42
PDLIM7-204ENST00000393546 FOXO4P98177 505 aa23.94■■□□□ 1.42
PDLIM7-204ENST00000393546 ANKRD18AQ8IVF6 992 aa23.94■■□□□ 1.42
PDLIM7-204ENST00000393546 PSMD1Q99460 953 aa23.94■■□□□ 1.42
PDLIM7-204ENST00000393546 USP44Q9H0E7 712 aa23.94■■□□□ 1.42
PDLIM7-204ENST00000393546 RTL9Q8NET4 1388 aa23.93■■□□□ 1.42
PDLIM7-204ENST00000393546 TRIM27P14373 513 aa23.93■■□□□ 1.42
PDLIM7-204ENST00000393546 MPNDQ8N594 471 aa23.93■■□□□ 1.42
PDLIM7-204ENST00000393546 CCDC88AQ3V6T2 1871 aa23.93■■□□□ 1.42
PDLIM7-204ENST00000393546 LMBR1LQ6UX01 489 aa23.92■■□□□ 1.42
PDLIM7-204ENST00000393546 SUCLG2Q96I99 432 aa23.92■■□□□ 1.42
PDLIM7-204ENST00000393546 ZNF277Q9NRM2 450 aaPredicted RBP23.92■■□□□ 1.42
PDLIM7-204ENST00000393546 CHMP3Q9Y3E7 222 aa23.92■■□□□ 1.42
PDLIM7-204ENST00000393546 ITGA6P23229 1130 aa23.91■■□□□ 1.42
PDLIM7-204ENST00000393546 EPHA10Q5JZY3 1008 aa23.91■■□□□ 1.42
PDLIM7-204ENST00000393546 INTS3Q68E01 1043 aaKnown RBP23.91■■□□□ 1.42
PDLIM7-204ENST00000393546 DPP8Q6V1X1 898 aaPredicted RBP23.91■■□□□ 1.42
PDLIM7-204ENST00000393546 SLC51AQ86UW1 340 aa23.91■■□□□ 1.42
PDLIM7-204ENST00000393546 ANKRD18BA2A2Z9 1011 aa23.9■■□□□ 1.42
PDLIM7-204ENST00000393546 FAM161AQ3B820 660 aa23.9■■□□□ 1.42
PDLIM7-204ENST00000393546 SUPT20HQ8NEM7 779 aa23.9■■□□□ 1.42
PDLIM7-204ENST00000393546 CLUAP1Q96AJ1 413 aa23.9■■□□□ 1.42
PDLIM7-204ENST00000393546 RCAN3Q9UKA8 241 aa23.9■■□□□ 1.42
PDLIM7-204ENST00000393546 SNED1Q8TER0 1413 aa23.9■■□□□ 1.42
PDLIM7-204ENST00000393546 IGHMBP2P38935 993 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-204ENST00000393546 IARSP41252 1262 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-204ENST00000393546 IFIT5Q13325 482 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-204ENST00000393546 ZNF784Q8NCA9 323 aaPredicted RBP23.89■■□□□ 1.41
PDLIM7-204ENST00000393546 NSFL1CQ9UNZ2 370 aaKnown RBP23.89■■□□□ 1.41
PDLIM7-204ENST00000393546 HDAC5Q9UQL6 1122 aa23.89■■□□□ 1.41
PDLIM7-204ENST00000393546 ZC3H4Q9UPT8 1303 aaKnown RBP23.88■■□□□ 1.41
PDLIM7-204ENST00000393546 CCDC57Q2TAC2 916 aa23.88■■□□□ 1.41
PDLIM7-204ENST00000393546 KAZALD1Q96I82 304 aa23.88■■□□□ 1.41
PDLIM7-204ENST00000393546 RTFDC1Q9BY42 306 aaPredicted RBP23.88■■□□□ 1.41
PDLIM7-204ENST00000393546 BSDC1Q9NW68 430 aaPredicted RBP23.88■■□□□ 1.41
PDLIM7-204ENST00000393546 TNNQ9UQP3 1299 aa23.88■■□□□ 1.41
PDLIM7-204ENST00000393546 UBTFL1P0CB47 393 aaPredicted RBP23.87■■□□□ 1.41
PDLIM7-204ENST00000393546 MPHOSPH8Q99549 860 aa23.87■■□□□ 1.41
PDLIM7-204ENST00000393546 VPS33BQ9H267 617 aa23.87■■□□□ 1.41
PDLIM7-204ENST00000393546 BICC1Q9H694 974 aaKnown RBP23.87■■□□□ 1.41
PDLIM7-204ENST00000393546 GPSM2P81274 684 aa23.86■■□□□ 1.41
PDLIM7-204ENST00000393546 FTSJ3Q8IY81 847 aaKnown RBP23.86■■□□□ 1.41
PDLIM7-204ENST00000393546 DICER1Q9UPY3 1922 aaKnown RBP23.86■■□□□ 1.41
PDLIM7-204ENST00000393546 COL4A1P02462 1669 aa23.86■■□□□ 1.41
PDLIM7-204ENST00000393546 DZIP1LQ8IYY4 767 aaKnown RBP23.85■■□□□ 1.41
PDLIM7-204ENST00000393546 LARGE2Q8N3Y3 721 aa23.85■■□□□ 1.41
PDLIM7-204ENST00000393546 JDP2Q8WYK2 163 aa23.85■■□□□ 1.41
PDLIM7-204ENST00000393546 ANKIB1Q9P2G1 1089 aa23.85■■□□□ 1.41
PDLIM7-204ENST00000393546 GNAI3P08754 354 aa23.84■■□□□ 1.41
PDLIM7-204ENST00000393546 RABL6Q3YEC7 729 aaPredicted RBP23.84■■□□□ 1.41
PDLIM7-204ENST00000393546 TAF7LQ5H9L4 462 aa23.84■■□□□ 1.41
PDLIM7-204ENST00000393546 ZNF526Q8TF50 670 aaPredicted RBP23.84■■□□□ 1.41
PDLIM7-204ENST00000393546 PODXL2Q9NZ53 605 aa23.84■■□□□ 1.41
PDLIM7-204ENST00000393546 MINPP1Q9UNW1 487 aa23.84■■□□□ 1.41
PDLIM7-204ENST00000393546 C6orf229H3BNL8 230 aa23.83■■□□□ 1.41
PDLIM7-204ENST00000393546 PPIP5K2O43314 1243 aa23.83■■□□□ 1.41
PDLIM7-204ENST00000393546 MS4A1P11836 297 aa23.83■■□□□ 1.41
PDLIM7-204ENST00000393546 DPY19L2Q6NUT2 758 aa23.83■■□□□ 1.41
PDLIM7-204ENST00000393546 TMEM57Q8N5G2 664 aa23.83■■□□□ 1.41
PDLIM7-204ENST00000393546 LRRC37AA6NMS7 1700 aa23.83■■□□□ 1.41
PDLIM7-204ENST00000393546 ANKRD44Q8N8A2 993 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms