RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 TTLL11Q8NHH1 800 aa21.44■■□□□ 1.02
SHTN1-203ENST00000392901 CIAO1O76071 339 aa21.44■■□□□ 1.02
SHTN1-203ENST00000392901 RABEP1Q15276 862 aa21.44■■□□□ 1.02
SHTN1-203ENST00000392901 GREM2Q9H772 168 aa21.44■■□□□ 1.02
SHTN1-203ENST00000392901 QTRT2Q9H974 415 aaKnown RBP21.44■■□□□ 1.02
SHTN1-203ENST00000392901 SGSM2O43147 1006 aa21.43■■□□□ 1.02
SHTN1-203ENST00000392901 CTSWP56202 376 aa21.43■■□□□ 1.02
SHTN1-203ENST00000392901 ONECUT3O60422 494 aaPredicted RBP21.43■■□□□ 1.02
SHTN1-203ENST00000392901 ATRNO75882 1429 aa21.43■■□□□ 1.02
SHTN1-203ENST00000392901 ITGA6P23229 1130 aa21.43■■□□□ 1.02
SHTN1-203ENST00000392901 NIP7Q9Y221 180 aaKnown RBP eCLIP21.43■■□□□ 1.02
SHTN1-203ENST00000392901 PDE8AO60658 829 aa21.42■■□□□ 1.02
SHTN1-203ENST00000392901 ATP5JP18859 108 aa21.42■■□□□ 1.02
SHTN1-203ENST00000392901 SMIM5Q71RC9 77 aa21.42■■□□□ 1.02
SHTN1-203ENST00000392901 CEP126Q9P2H0 1117 aa21.42■■□□□ 1.02
SHTN1-203ENST00000392901 CICQ96RK0 1608 aaPredicted RBP21.42■■□□□ 1.02
SHTN1-203ENST00000392901 MCCP23508 829 aa21.41■■□□□ 1.02
SHTN1-203ENST00000392901 EDC3Q96F86 508 aaKnown RBP21.41■■□□□ 1.02
SHTN1-203ENST00000392901 RREB1Q92766 1687 aa21.41■■□□□ 1.02
SHTN1-203ENST00000392901 UTP14AQ9BVJ6 771 aaKnown RBP21.41■■□□□ 1.02
SHTN1-203ENST00000392901 GPR108Q9NPR9 543 aa21.41■■□□□ 1.02
SHTN1-203ENST00000392901 NDUFB9Q9Y6M9 179 aa21.41■■□□□ 1.02
SHTN1-203ENST00000392901 HCLS1P14317 486 aaPredicted RBP21.4■■□□□ 1.02
SHTN1-203ENST00000392901 DEKP35659 375 aaKnown RBP21.4■■□□□ 1.02
SHTN1-203ENST00000392901 FSD1Q9BTV5 496 aa21.4■■□□□ 1.02
SHTN1-203ENST00000392901 COL5A3P25940 1745 aaPredicted RBP21.4■■□□□ 1.02
SHTN1-203ENST00000392901 ANKRD18BA2A2Z9 1011 aa21.4■■□□□ 1.02
SHTN1-203ENST00000392901 RUFY2Q8WXA3 655 aa21.4■■□□□ 1.02
SHTN1-203ENST00000392901 DNAJC2Q99543 621 aaKnown RBP21.4■■□□□ 1.02
SHTN1-203ENST00000392901 CCNL1Q9UK58 526 aaPredicted RBP21.4■■□□□ 1.02
SHTN1-203ENST00000392901 SH3TC1Q8TE82 1336 aa21.4■■□□□ 1.02
SHTN1-203ENST00000392901 BTAF1O14981 1849 aa21.39■■□□□ 1.02
SHTN1-203ENST00000392901 A0A1B0GUL7 405 aa21.39■■□□□ 1.01
SHTN1-203ENST00000392901 K7ELQ4 463 aaPredicted RBP21.39■■□□□ 1.01
SHTN1-203ENST00000392901 PARP10Q53GL7 1025 aa21.39■■□□□ 1.01
SHTN1-203ENST00000392901 LDHAL6AQ6ZMR3 332 aa21.39■■□□□ 1.01
SHTN1-203ENST00000392901 KIAA1211Q6ZU35 1233 aa21.39■■□□□ 1.01
SHTN1-203ENST00000392901 FBXO3Q9UK99 471 aa21.39■■□□□ 1.01
SHTN1-203ENST00000392901 PALD1Q9ULE6 856 aa21.39■■□□□ 1.01
SHTN1-203ENST00000392901 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
SHTN1-203ENST00000392901 CNTNAP4Q9C0A0 1308 aa21.38■■□□□ 1.01
SHTN1-203ENST00000392901 FAM227BQ96M60 508 aa21.37■■□□□ 1.01
SHTN1-203ENST00000392901 NHSQ6T4R5 1651 aa21.37■■□□□ 1.01
SHTN1-203ENST00000392901 LSG1Q9H089 658 aaKnown RBP21.37■■□□□ 1.01
SHTN1-203ENST00000392901 CNNM1Q9NRU3 951 aa21.37■■□□□ 1.01
SHTN1-203ENST00000392901 FOXD4L1Q9NU39 408 aa21.37■■□□□ 1.01
SHTN1-203ENST00000392901 CHMP5Q9NZZ3 219 aa21.37■■□□□ 1.01
SHTN1-203ENST00000392901 HIP1O00291 1037 aa21.36■■□□□ 1.01
SHTN1-203ENST00000392901 DDIT3P35638 169 aa21.36■■□□□ 1.01
SHTN1-203ENST00000392901 NMIQ13287 307 aaPredicted RBP21.36■■□□□ 1.01
SHTN1-203ENST00000392901 ZNF831Q5JPB2 1677 aa21.36■■□□□ 1.01
SHTN1-203ENST00000392901 ZNF609O15014 1411 aa21.36■■□□□ 1.01
SHTN1-203ENST00000392901 RAD50Q92878 1312 aa21.36■■□□□ 1.01
SHTN1-203ENST00000392901 GNPATO15228 680 aa21.36■■□□□ 1.01
SHTN1-203ENST00000392901 HAUS7Q99871 368 aa21.36■■□□□ 1.01
SHTN1-203ENST00000392901 EPB41L2O43491 1005 aaKnown RBP21.35■■□□□ 1.01
SHTN1-203ENST00000392901 ST18O60284 1047 aa21.35■■□□□ 1.01
SHTN1-203ENST00000392901 HSP90AA1P07900 732 aaKnown RBP21.35■■□□□ 1.01
SHTN1-203ENST00000392901 METTL24Q5JXM2 366 aa21.35■■□□□ 1.01
SHTN1-203ENST00000392901 CLEC4GQ6UXB4 293 aa21.35■■□□□ 1.01
SHTN1-203ENST00000392901 AKAP2Q9Y2D5 859 aa21.35■■□□□ 1.01
SHTN1-203ENST00000392901 RIPOR2Q9Y4F9 1068 aa21.35■■□□□ 1.01
SHTN1-203ENST00000392901 NTSR2O95665 410 aa21.34■■□□□ 1.01
SHTN1-203ENST00000392901 HSPA4P34932 840 aa21.34■■□□□ 1.01
SHTN1-203ENST00000392901 RC3H1Q5TC82 1133 aaKnown RBP21.34■■□□□ 1.01
SHTN1-203ENST00000392901 BICDL1Q6ZP65 573 aa21.34■■□□□ 1.01
SHTN1-203ENST00000392901 AK7Q96M32 723 aa21.34■■□□□ 1.01
SHTN1-203ENST00000392901 MYH3P11055 1940 aa21.34■■□□□ 1.01
SHTN1-203ENST00000392901 RPS6KA4O75676 772 aa21.34■■□□□ 1.01
SHTN1-203ENST00000392901 ANAPC15P60006 121 aa21.34■■□□□ 1.01
SHTN1-203ENST00000392901 DDX46Q7L014 1031 aaKnown RBP21.34■■□□□ 1.01
SHTN1-203ENST00000392901 NEK4P51957 841 aa21.33■■□□□ 1.01
SHTN1-203ENST00000392901 GORABQ5T7V8 394 aa21.33■■□□□ 1.01
SHTN1-203ENST00000392901 A0A0D9SFI3 127 aa21.33■■□□□ 1
SHTN1-203ENST00000392901 ADORA1P30542 326 aa21.33■■□□□ 1
SHTN1-203ENST00000392901 PTH1RQ03431 593 aa21.33■■□□□ 1
SHTN1-203ENST00000392901 XAGE2Q96GT9 111 aa21.33■■□□□ 1
SHTN1-203ENST00000392901 USPL1Q5W0Q7 1092 aa21.32■■□□□ 1
SHTN1-203ENST00000392901 RTCBQ9Y3I0 505 aaKnown RBP21.32■■□□□ 1
SHTN1-203ENST00000392901 GOLIM4O00461 696 aa21.31■■□□□ 1
SHTN1-203ENST00000392901 IFIT1P09914 478 aaKnown RBP21.31■■□□□ 1
SHTN1-203ENST00000392901 SRP68Q9UHB9 627 aaKnown RBP21.31■■□□□ 1
SHTN1-203ENST00000392901 CCDC158Q5M9N0 1113 aa21.31■■□□□ 1
SHTN1-203ENST00000392901 BCL11BQ9C0K0 894 aaPredicted RBP21.31■■□□□ 1
SHTN1-203ENST00000392901 SEC31BQ9NQW1 1179 aa21.31■■□□□ 1
SHTN1-203ENST00000392901 EP400Q96L91 3159 aa21.31■■□□□ 1
SHTN1-203ENST00000392901 CHGBP05060 677 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 ATP2B3Q16720 1220 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 AMIGO3Q86WK7 504 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 BCL2L12Q9HB09 334 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 PAG1Q9NWQ8 432 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 SBF2Q86WG5 1849 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 RIC1Q4ADV7 1423 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 ZPR1O75312 459 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 TTC39AQ5SRH9 613 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 TBC1D9BQ66K14 1250 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 NARFQ9UHQ1 456 aa21.3■■□□□ 1
SHTN1-203ENST00000392901 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
SHTN1-203ENST00000392901 CCDC152Q4G0S7 254 aa21.29■■□□□ 1
SHTN1-203ENST00000392901 UPF3BQ9BZI7 483 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms