RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
CCDC50-201ENST00000392455 CLUL1Q15846 466 aa16.77■□□□□ 0.27
CCDC50-201ENST00000392455 SRGAP1Q7Z6B7 1085 aa16.77■□□□□ 0.27
CCDC50-201ENST00000392455 OTUD6BQ8N6M0 293 aa16.77■□□□□ 0.27
CCDC50-201ENST00000392455 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
CCDC50-201ENST00000392455 PRPF4BQ13523 1007 aaKnown RBP16.76■□□□□ 0.27
CCDC50-201ENST00000392455 SYCP3Q8IZU3 236 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 CCDC89Q8N998 374 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 TSGA10Q9BZW7 698 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 TNNT1P13805 278 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 TSNAXIP1Q2TAA8 658 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 SEPT14Q6ZU15 432 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 IMPG2Q9BZV3 1241 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 TTC31Q49AM3 519 aaPredicted RBP16.76■□□□□ 0.27
CCDC50-201ENST00000392455 MAP3K21Q5TCX8 1036 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
CCDC50-201ENST00000392455 MTRF1LQ9UGC7 380 aaKnown RBP16.75■□□□□ 0.27
CCDC50-201ENST00000392455 EXOC6BQ9Y2D4 811 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 TACC3Q9Y6A5 838 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 VPS52Q8N1B4 723 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 GPR161Q8N6U8 529 aaKnown RBP16.75■□□□□ 0.27
CCDC50-201ENST00000392455 ATP6V1E1P36543 226 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 TMEM57Q8N5G2 664 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 C8orf76Q96K31 380 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 CTAGE9A4FU28 777 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 GBP6Q6ZN66 633 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 UBA5Q9GZZ9 404 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 GIPC1O14908 333 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 PTCD1O75127 700 aaKnown RBP16.75■□□□□ 0.27
CCDC50-201ENST00000392455 CNNM3Q8NE01 707 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 PSMD1Q99460 953 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 MTUS1Q9ULD2 1270 aa16.75■□□□□ 0.27
CCDC50-201ENST00000392455 SPAG1Q07617 926 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 CATIPQ7Z7H3 387 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 NFE2L2Q16236 605 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 CCDC194A0A1B0GVG4 234 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 PRR16Q569H4 304 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 WDR78Q5VTH9 848 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 UVSSAQ2YD98 709 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 KLHL10Q6JEL2 608 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 MYD88Q99836 296 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 DHX29Q7Z478 1369 aaKnown RBP16.74■□□□□ 0.27
CCDC50-201ENST00000392455 CCDC63Q8NA47 563 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 EFCAB5A4FU69 1503 aa16.74■□□□□ 0.27
CCDC50-201ENST00000392455 GTF2F1P35269 517 aaKnown RBP eCLIP16.73■□□□□ 0.27
CCDC50-201ENST00000392455 FCHSD2O94868 740 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 MCM10Q7L590 875 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 SYCE3A1L190 88 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 SMARCA5O60264 1052 aaPredicted RBP16.73■□□□□ 0.27
CCDC50-201ENST00000392455 KIF1BPQ96EK5 621 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 NAPBQ9H115 298 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 RFC1P35251 1148 aaPredicted RBP16.73■□□□□ 0.27
CCDC50-201ENST00000392455 BACH2Q9BYV9 841 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 DUSP27Q5VZP5 1158 aa16.73■□□□□ 0.27
CCDC50-201ENST00000392455 CCDC96Q2M329 555 aa16.72■□□□□ 0.27
CCDC50-201ENST00000392455 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
CCDC50-201ENST00000392455 FYB2Q5VWT5 728 aa16.72■□□□□ 0.27
CCDC50-201ENST00000392455 POGZQ7Z3K3 1410 aa16.72■□□□□ 0.27
CCDC50-201ENST00000392455 EIF2AQ9BY44 585 aaKnown RBP16.72■□□□□ 0.27
CCDC50-201ENST00000392455 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
CCDC50-201ENST00000392455 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
CCDC50-201ENST00000392455 LIG1P18858 919 aa16.71■□□□□ 0.27
CCDC50-201ENST00000392455 PRPF40BQ6NWY9 871 aaKnown RBP16.71■□□□□ 0.27
CCDC50-201ENST00000392455 TTLL12Q14166 644 aaPredicted RBP16.71■□□□□ 0.27
CCDC50-201ENST00000392455 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.27
CCDC50-201ENST00000392455 CRCPO75575 148 aa16.71■□□□□ 0.27
CCDC50-201ENST00000392455 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
CCDC50-201ENST00000392455 KRT83P78385 493 aa16.71■□□□□ 0.27
CCDC50-201ENST00000392455 SSRP1Q08945 709 aaKnown RBP16.71■□□□□ 0.27
CCDC50-201ENST00000392455 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
CCDC50-201ENST00000392455 SEC62Q99442 399 aaKnown RBP16.71■□□□□ 0.26
CCDC50-201ENST00000392455 CBX1P83916 185 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 RANBP6O60518 1105 aaKnown RBP16.7■□□□□ 0.26
CCDC50-201ENST00000392455 KCNH5Q8NCM2 988 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 MCM4P33991 863 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 RASSF2P50749 326 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 TBCAO75347 108 aaKnown RBP16.7■□□□□ 0.26
CCDC50-201ENST00000392455 GIGYF1O75420 1035 aaPredicted RBP16.7■□□□□ 0.26
CCDC50-201ENST00000392455 MX1P20591 662 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 CPLX4Q7Z7G2 160 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 SERPINA10Q9UK55 444 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 ZNF444Q8N0Y2 327 aaPredicted RBP16.7■□□□□ 0.26
CCDC50-201ENST00000392455 GLRX3O76003 335 aaKnown RBP16.7■□□□□ 0.26
CCDC50-201ENST00000392455 CTAGE6Q86UF2 777 aa16.7■□□□□ 0.26
CCDC50-201ENST00000392455 RPAP2Q8IXW5 612 aaPredicted RBP16.7■□□□□ 0.26
CCDC50-201ENST00000392455 RPGRQ92834 1020 aaKnown RBP16.7■□□□□ 0.26
CCDC50-201ENST00000392455 BICD1Q96G01 975 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 EXOC1Q9NV70 894 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 GUCY1B3Q02153 619 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 FERMT3Q86UX7 667 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 FAM135AQ9P2D6 1515 aa16.69■□□□□ 0.26
CCDC50-201ENST00000392455 INTS8Q75QN2 995 aaKnown RBP16.69■□□□□ 0.26
CCDC50-201ENST00000392455 GSTA5Q7RTV2 222 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms