RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 MASTLQ96GX5 879 aa31.92■■■□□ 2.7
HOMER3-202ENST00000392351 GNAI3P08754 354 aa31.91■■■□□ 2.7
HOMER3-202ENST00000392351 NPR1P16066 1061 aa31.91■■■□□ 2.7
HOMER3-202ENST00000392351 SF3B3Q15393 1217 aaKnown RBP31.91■■■□□ 2.7
HOMER3-202ENST00000392351 CENPBP07199 599 aaPredicted RBP31.9■■■□□ 2.7
HOMER3-202ENST00000392351 CCDC85AQ96PX6 553 aaPredicted RBP31.9■■■□□ 2.7
HOMER3-202ENST00000392351 WWC3Q9ULE0 1092 aa31.9■■■□□ 2.7
HOMER3-202ENST00000392351 FOXO4P98177 505 aa31.9■■■□□ 2.7
HOMER3-202ENST00000392351 EPHA10Q5JZY3 1008 aa31.9■■■□□ 2.7
HOMER3-202ENST00000392351 STYK1Q6J9G0 422 aa31.9■■■□□ 2.7
HOMER3-202ENST00000392351 KAZALD1Q96I82 304 aa31.9■■■□□ 2.7
HOMER3-202ENST00000392351 CCDC152Q4G0S7 254 aa31.89■■■□□ 2.7
HOMER3-202ENST00000392351 TTLL11Q8NHH1 800 aa31.89■■■□□ 2.7
HOMER3-202ENST00000392351 PIM2Q9P1W9 311 aa31.88■■■□□ 2.69
HOMER3-202ENST00000392351 ZBTB7BO15156 539 aaPredicted RBP31.87■■■□□ 2.69
HOMER3-202ENST00000392351 HOXA10P31260 410 aaPredicted RBP31.87■■■□□ 2.69
HOMER3-202ENST00000392351 RBM17Q96I25 401 aaKnown RBP31.87■■■□□ 2.69
HOMER3-202ENST00000392351 BICC1Q9H694 974 aaKnown RBP31.87■■■□□ 2.69
HOMER3-202ENST00000392351 DDX19BQ9UMR2 479 aa31.87■■■□□ 2.69
HOMER3-202ENST00000392351 SLX4Q8IY92 1834 aa31.86■■■□□ 2.69
HOMER3-202ENST00000392351 DDX46Q7L014 1031 aaKnown RBP31.86■■■□□ 2.69
HOMER3-202ENST00000392351 HDAC5Q9UQL6 1122 aa31.86■■■□□ 2.69
HOMER3-202ENST00000392351 LRRFIP2Q9Y608 721 aaKnown RBP31.86■■■□□ 2.69
HOMER3-202ENST00000392351 LMBR1LQ6UX01 489 aa31.85■■■□□ 2.69
HOMER3-202ENST00000392351 CSF1RP07333 972 aa31.85■■■□□ 2.69
HOMER3-202ENST00000392351 CNKSR1Q969H4 720 aa31.85■■■□□ 2.69
HOMER3-202ENST00000392351 GREM2Q9H772 168 aa31.85■■■□□ 2.69
HOMER3-202ENST00000392351 CHMP3Q9Y3E7 222 aa31.85■■■□□ 2.69
HOMER3-202ENST00000392351 ALDH1B1P30837 517 aa31.84■■■□□ 2.69
HOMER3-202ENST00000392351 TTLL6Q8N841 843 aa31.84■■■□□ 2.69
HOMER3-202ENST00000392351 CRAMP1Q96RY5 1269 aa31.84■■■□□ 2.69
HOMER3-202ENST00000392351 FAM161AQ3B820 660 aa31.83■■■□□ 2.69
HOMER3-202ENST00000392351 ANKRD44Q8N8A2 993 aa31.83■■■□□ 2.69
HOMER3-202ENST00000392351 SPEF2Q9C093 1822 aa31.83■■■□□ 2.69
HOMER3-202ENST00000392351 COL4A1P02462 1669 aa31.83■■■□□ 2.69
HOMER3-202ENST00000392351 ARFGEF1Q9Y6D6 1849 aa31.82■■■□□ 2.69
HOMER3-202ENST00000392351 GNAI2P04899 355 aa31.82■■■□□ 2.68
HOMER3-202ENST00000392351 DALRD3Q5D0E6 543 aaKnown RBP31.82■■■□□ 2.68
HOMER3-202ENST00000392351 SEC31BQ9NQW1 1179 aa31.82■■■□□ 2.68
HOMER3-202ENST00000392351 RTL9Q8NET4 1388 aa31.82■■■□□ 2.68
HOMER3-202ENST00000392351 RABL6Q3YEC7 729 aaPredicted RBP31.81■■■□□ 2.68
HOMER3-202ENST00000392351 PRPF40BQ6NWY9 871 aaKnown RBP31.81■■■□□ 2.68
HOMER3-202ENST00000392351 BCS1LQ9Y276 419 aa31.81■■■□□ 2.68
HOMER3-202ENST00000392351 GRAPQ13588 217 aa31.8■■■□□ 2.68
HOMER3-202ENST00000392351 GRAPLQ8TC17 118 aaPredicted RBP31.8■■■□□ 2.68
HOMER3-202ENST00000392351 ITGA6P23229 1130 aa31.79■■■□□ 2.68
HOMER3-202ENST00000392351 PELP1Q8IZL8 1130 aaKnown RBP31.79■■■□□ 2.68
HOMER3-202ENST00000392351 CHMP4BQ9H444 224 aaKnown RBP31.79■■■□□ 2.68
HOMER3-202ENST00000392351 C1orf115Q9H7X2 142 aa31.79■■■□□ 2.68
HOMER3-202ENST00000392351 CELF1Q92879 486 aaKnown RBP31.78■■■□□ 2.68
HOMER3-202ENST00000392351 CRBNQ96SW2 442 aa31.77■■■□□ 2.68
HOMER3-202ENST00000392351 IFIT5Q13325 482 aaKnown RBP31.77■■■□□ 2.68
HOMER3-202ENST00000392351 ZBTB40Q9NUA8 1239 aa31.77■■■□□ 2.68
HOMER3-202ENST00000392351 CCDC57Q2TAC2 916 aa31.76■■■□□ 2.67
HOMER3-202ENST00000392351 CDC5LQ99459 802 aaKnown RBP31.76■■■□□ 2.67
HOMER3-202ENST00000392351 ANKRD18BA2A2Z9 1011 aa31.75■■■□□ 2.67
HOMER3-202ENST00000392351 PPEF1O14829 653 aaPredicted RBP31.75■■■□□ 2.67
HOMER3-202ENST00000392351 ZNF219Q9P2Y4 722 aaPredicted RBP31.75■■■□□ 2.67
HOMER3-202ENST00000392351 RPS8P62241 208 aaKnown RBP31.74■■■□□ 2.67
HOMER3-202ENST00000392351 ANKRD18AQ8IVF6 992 aa31.74■■■□□ 2.67
HOMER3-202ENST00000392351 BBOX1O75936 387 aa31.73■■■□□ 2.67
HOMER3-202ENST00000392351 YBX3P16989 372 aaKnown RBP eCLIP31.73■■■□□ 2.67
HOMER3-202ENST00000392351 UTRNP46939 3433 aa31.73■■■□□ 2.67
HOMER3-202ENST00000392351 GPR162Q16538 588 aa31.73■■■□□ 2.67
HOMER3-202ENST00000392351 LRRC37AA6NMS7 1700 aa31.72■■■□□ 2.67
HOMER3-202ENST00000392351 C21orf2O43822 256 aa31.72■■■□□ 2.67
HOMER3-202ENST00000392351 IRX6P78412 446 aaPredicted RBP31.71■■■□□ 2.67
HOMER3-202ENST00000392351 TAF7LQ5H9L4 462 aa31.71■■■□□ 2.67
HOMER3-202ENST00000392351 IGHMBP2P38935 993 aaKnown RBP31.7■■■□□ 2.67
HOMER3-202ENST00000392351 MTX1Q13505 466 aa31.7■■■□□ 2.67
HOMER3-202ENST00000392351 SLC51AQ86UW1 340 aa31.7■■■□□ 2.67
HOMER3-202ENST00000392351 C7orf43Q8WVR3 580 aa31.7■■■□□ 2.67
HOMER3-202ENST00000392351 SRGAP3O43295 1099 aa31.69■■■□□ 2.66
HOMER3-202ENST00000392351 OLFM4Q6UX06 510 aa31.69■■■□□ 2.66
HOMER3-202ENST00000392351 ZNF594Q96JF6 807 aaPredicted RBP31.69■■■□□ 2.66
HOMER3-202ENST00000392351 TMC4Q7Z404 712 aa31.68■■■□□ 2.66
HOMER3-202ENST00000392351 ATP6V0A2Q9Y487 856 aa31.68■■■□□ 2.66
HOMER3-202ENST00000392351 MPHOSPH8Q99549 860 aa31.68■■■□□ 2.66
HOMER3-202ENST00000392351 FER1L6Q2WGJ9 1857 aa31.66■■■□□ 2.66
HOMER3-202ENST00000392351 PNMA6EA0A0J9YXQ4 647 aa31.66■■■□□ 2.66
HOMER3-202ENST00000392351 RFX5P48382 616 aaPredicted RBP31.66■■■□□ 2.66
HOMER3-202ENST00000392351 CEP85Q6P2H3 762 aa31.66■■■□□ 2.66
HOMER3-202ENST00000392351 KLHDC4Q8TBB5 520 aa31.66■■■□□ 2.66
HOMER3-202ENST00000392351 TMX4Q9H1E5 349 aaPredicted RBP31.66■■■□□ 2.66
HOMER3-202ENST00000392351 BSDC1Q9NW68 430 aaPredicted RBP31.66■■■□□ 2.66
HOMER3-202ENST00000392351 SOGA3Q5TF21 947 aa31.65■■■□□ 2.66
HOMER3-202ENST00000392351 SP8Q8IXZ3 490 aa31.65■■■□□ 2.66
HOMER3-202ENST00000392351 ATP8B2P98198 1209 aa31.64■■■□□ 2.66
HOMER3-202ENST00000392351 EXOC6Q8TAG9 804 aa31.64■■■□□ 2.66
HOMER3-202ENST00000392351 CCDC93Q567U6 631 aa31.64■■■□□ 2.65
HOMER3-202ENST00000392351 LDHAL6AQ6ZMR3 332 aa31.64■■■□□ 2.65
HOMER3-202ENST00000392351 PTPN12Q05209 780 aaKnown RBP31.63■■■□□ 2.65
HOMER3-202ENST00000392351 CC2D2BQ6DHV5 1058 aa31.63■■■□□ 2.65
HOMER3-202ENST00000392351 A0A1B0GUL6 1792 aa31.63■■■□□ 2.65
HOMER3-202ENST00000392351 DCAF8L1A6NGE4 600 aa31.62■■■□□ 2.65
HOMER3-202ENST00000392351 CNNM1Q9NRU3 951 aa31.61■■■□□ 2.65
HOMER3-202ENST00000392351 GRIN3BO60391 1043 aa31.6■■■□□ 2.65
HOMER3-202ENST00000392351 RPAP2Q8IXW5 612 aaPredicted RBP31.6■■■□□ 2.65
HOMER3-202ENST00000392351 PUS3Q9BZE2 481 aaKnown RBP31.6■■■□□ 2.65
HOMER3-202ENST00000392351 PA2G4Q9UQ80 394 aaKnown RBP31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms