RNA–Protein interactions for RNA: ENST00000391867.7

MRPL55-219, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-219ENST00000391867 GCKRQ14397 625 aa16.71■□□□□ 0.27
MRPL55-219ENST00000391867 MRPL50Q8N5N7 158 aaKnown RBP16.71■□□□□ 0.27
MRPL55-219ENST00000391867 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
MRPL55-219ENST00000391867 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
MRPL55-219ENST00000391867 KIF3CO14782 793 aa16.7■□□□□ 0.26
MRPL55-219ENST00000391867 PDE8AO60658 829 aa16.7■□□□□ 0.26
MRPL55-219ENST00000391867 BBOX1O75936 387 aa16.7■□□□□ 0.26
MRPL55-219ENST00000391867 IARSP41252 1262 aaKnown RBP16.7■□□□□ 0.26
MRPL55-219ENST00000391867 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
MRPL55-219ENST00000391867 SLC4A10Q6U841 1118 aa16.7■□□□□ 0.26
MRPL55-219ENST00000391867 DICER1Q9UPY3 1922 aaKnown RBP16.7■□□□□ 0.26
MRPL55-219ENST00000391867 KDM2BQ8NHM5 1336 aa16.7■□□□□ 0.26
MRPL55-219ENST00000391867 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
MRPL55-219ENST00000391867 ZC3H4Q9UPT8 1303 aaKnown RBP16.7■□□□□ 0.26
MRPL55-219ENST00000391867 COL4A5P29400 1685 aa16.69■□□□□ 0.26
MRPL55-219ENST00000391867 H7C1W4 665 aa16.69■□□□□ 0.26
MRPL55-219ENST00000391867 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
MRPL55-219ENST00000391867 PSMD1Q99460 953 aa16.69■□□□□ 0.26
MRPL55-219ENST00000391867 TMX4Q9H1E5 349 aaPredicted RBP16.69■□□□□ 0.26
MRPL55-219ENST00000391867 RRAGCQ9HB90 399 aa16.69■□□□□ 0.26
MRPL55-219ENST00000391867 GLTPD2A6NH11 291 aa16.68■□□□□ 0.26
MRPL55-219ENST00000391867 HSP90B1P14625 803 aaKnown RBP16.68■□□□□ 0.26
MRPL55-219ENST00000391867 CTSWP56202 376 aa16.68■□□□□ 0.26
MRPL55-219ENST00000391867 CCDC152Q4G0S7 254 aa16.68■□□□□ 0.26
MRPL55-219ENST00000391867 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
MRPL55-219ENST00000391867 SMC4Q9NTJ3 1288 aa16.68■□□□□ 0.26
MRPL55-219ENST00000391867 ZNF541Q9H0D2 1346 aa16.68■□□□□ 0.26
MRPL55-219ENST00000391867 CASP7P55210 303 aa16.67■□□□□ 0.26
MRPL55-219ENST00000391867 C1QTNF8P60827 252 aa16.67■□□□□ 0.26
MRPL55-219ENST00000391867 DPP8Q6V1X1 898 aaPredicted RBP16.67■□□□□ 0.26
MRPL55-219ENST00000391867 MPNDQ8N594 471 aa16.67■□□□□ 0.26
MRPL55-219ENST00000391867 DDNO94850 711 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-219ENST00000391867 RPS8P62241 208 aaKnown RBP16.66■□□□□ 0.26
MRPL55-219ENST00000391867 AOC3Q16853 763 aa16.66■□□□□ 0.26
MRPL55-219ENST00000391867 LARGE2Q8N3Y3 721 aa16.66■□□□□ 0.26
MRPL55-219ENST00000391867 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
MRPL55-219ENST00000391867 GREM2Q9H772 168 aa16.66■□□□□ 0.26
MRPL55-219ENST00000391867 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
MRPL55-219ENST00000391867 DUOX1Q9NRD9 1551 aa16.65■□□□□ 0.26
MRPL55-219ENST00000391867 PPIP5K2O43314 1243 aa16.65■□□□□ 0.26
MRPL55-219ENST00000391867 GPSM2P81274 684 aa16.65■□□□□ 0.26
MRPL55-219ENST00000391867 DPY19L2Q6NUT2 758 aa16.65■□□□□ 0.26
MRPL55-219ENST00000391867 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
MRPL55-219ENST00000391867 ALDH1L2Q3SY69 923 aa16.64■□□□□ 0.25
MRPL55-219ENST00000391867 GRIPAP1Q4V328 841 aa16.64■□□□□ 0.25
MRPL55-219ENST00000391867 TMC4Q7Z404 712 aa16.64■□□□□ 0.25
MRPL55-219ENST00000391867 JDP2Q8WYK2 163 aa16.64■□□□□ 0.25
MRPL55-219ENST00000391867 GPR101Q96P66 508 aaPredicted RBP16.64■□□□□ 0.25
MRPL55-219ENST00000391867 SRCIN1Q9C0H9 1055 aa16.64■□□□□ 0.25
MRPL55-219ENST00000391867 MYH3P11055 1940 aa16.64■□□□□ 0.25
MRPL55-219ENST00000391867 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
MRPL55-219ENST00000391867 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
MRPL55-219ENST00000391867 RTFDC1Q9BY42 306 aaPredicted RBP16.63■□□□□ 0.25
MRPL55-219ENST00000391867 PTPRCP08575 1304 aa16.63■□□□□ 0.25
MRPL55-219ENST00000391867 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 POTECB2RU33 542 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 FZD9O00144 591 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 GRM8O00222 908 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 ALDH1L1O75891 902 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-219ENST00000391867 SUPT20HQ8NEM7 779 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 PLA2G12BQ9BX93 195 aa16.62■□□□□ 0.25
MRPL55-219ENST00000391867 C9orf78Q9NZ63 289 aaPredicted RBP16.62■□□□□ 0.25
MRPL55-219ENST00000391867 C6orf229H3BNL8 230 aa16.61■□□□□ 0.25
MRPL55-219ENST00000391867 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-219ENST00000391867 RARSP54136 660 aaKnown RBP16.61■□□□□ 0.25
MRPL55-219ENST00000391867 EPHA10Q5JZY3 1008 aa16.61■□□□□ 0.25
MRPL55-219ENST00000391867 POLLQ9UGP5 575 aa16.61■□□□□ 0.25
MRPL55-219ENST00000391867 NOB1Q9ULX3 412 aaKnown RBP16.61■□□□□ 0.25
MRPL55-219ENST00000391867 CHMP3Q9Y3E7 222 aa16.61■□□□□ 0.25
MRPL55-219ENST00000391867 WDR90Q96KV7 1748 aa16.6■□□□□ 0.25
MRPL55-219ENST00000391867 RIMBP2O15034 1052 aa16.6■□□□□ 0.25
MRPL55-219ENST00000391867 VEGFAP15692 232 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-219ENST00000391867 ITGA6P23229 1130 aa16.6■□□□□ 0.25
MRPL55-219ENST00000391867 FOXO4P98177 505 aa16.6■□□□□ 0.25
MRPL55-219ENST00000391867 CDC5LQ99459 802 aaKnown RBP16.6■□□□□ 0.25
MRPL55-219ENST00000391867 ANKIB1Q9P2G1 1089 aa16.6■□□□□ 0.25
MRPL55-219ENST00000391867 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
MRPL55-219ENST00000391867 LTBP1Q14766 1721 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 TOMM70O94826 608 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 UFL1O94874 794 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-219ENST00000391867 EIF6P56537 245 aaKnown RBP16.59■□□□□ 0.25
MRPL55-219ENST00000391867 KIAA2012Q0VF49 1180 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 TBC1D16Q8TBP0 767 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 SUCLG2Q96I99 432 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 ZBED9Q6R2W3 1325 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 RTL9Q8NET4 1388 aa16.59■□□□□ 0.25
MRPL55-219ENST00000391867 WTIPA6NIX2 430 aaPredicted RBP16.58■□□□□ 0.24
MRPL55-219ENST00000391867 CSF1RP07333 972 aa16.58■□□□□ 0.24
MRPL55-219ENST00000391867 WASHC4Q2M389 1173 aa16.58■□□□□ 0.24
MRPL55-219ENST00000391867 LMBR1LQ6UX01 489 aa16.58■□□□□ 0.24
MRPL55-219ENST00000391867 BCAR3O75815 825 aa16.57■□□□□ 0.24
MRPL55-219ENST00000391867 IGHMBP2P38935 993 aaKnown RBP16.57■□□□□ 0.24
MRPL55-219ENST00000391867 DBNDD1Q9H9R9 158 aa16.57■□□□□ 0.24
MRPL55-219ENST00000391867 GGA1Q9UJY5 639 aa16.57■□□□□ 0.24
MRPL55-219ENST00000391867 ZNRF3Q9ULT6 936 aa16.57■□□□□ 0.24
MRPL55-219ENST00000391867 ANKRD18BA2A2Z9 1011 aa16.56■□□□□ 0.24
MRPL55-219ENST00000391867 RAD17O75943 681 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms