RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 USP17L18D6R9N7 530 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 USP17L22D6RA61 530 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 USP17L17D6RBQ6 530 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 USP17L19D6RCP7 530 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 USP17L20D6RJB6 530 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 APBA3O96018 575 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 IDH3AP50213 366 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 USP17L24Q0WX57 530 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 CAPN12Q6ZSI9 719 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 DZIP1LQ8IYY4 767 aaKnown RBP4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 WFDC12Q8WWY7 111 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 UBE2OQ9C0C9 1292 aaKnown RBP4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 FRRS1LQ9P0K9 344 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 SLAIN2Q9P270 581 aa4.36□□□□□ -1.71
SNORA40.19-201ENST00000390846 SPDYE3A6NKU9 549 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 FAM196BA6NMK8 535 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 SASH3O75995 380 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 HOXD8P13378 290 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 UBTFP17480 764 aaKnown RBP4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 FLIIQ13045 1269 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 OCLNQ16625 522 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 Q6ZS46 218 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 DHX32Q7L7V1 743 aaKnown RBP4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 ANKMY2Q8IV38 441 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 CHMP7Q8WUX9 453 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 ZFP64Q9NPA5 681 aa4.35□□□□□ -1.71
SNORA40.19-201ENST00000390846 TNFRSF10BO14763 440 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 MICAL2O94851 1124 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 MED26O95402 600 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 CPB1P15086 417 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 GPLD1P80108 840 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 MLLT1Q03111 559 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 DGKZQ13574 1117 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 TRIP4Q15650 581 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 COX20Q5RI15 118 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 COL13A1Q5TAT6 717 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 PROSER2Q86WR7 435 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 NACC1Q96RE7 527 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 SAP130Q9H0E3 1048 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 IGFLR1Q9H665 355 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 NEUROD4Q9HD90 331 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 C11orf16Q9NQ32 467 aa4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.19-201ENST00000390846 ADAMTS4O75173 837 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 ALX3O95076 343 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 IREB2P48200 963 aaKnown RBP4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 FKBP5Q13451 457 aaPredicted RBP4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 LRP8Q14114 963 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 SETDB1Q15047 1291 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 HFE2Q6ZVN8 426 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 FAM35AQ86V20 835 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 ETFBKMTQ8IXQ9 262 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 TP53INP1Q96A56 240 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 ZMIZ1Q9ULJ6 1067 aa4.33□□□□□ -1.72
SNORA40.19-201ENST00000390846 A6NJR5 290 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 J3QW42 95 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 MMP20O60882 483 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 RGS9O75916 674 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 TBC1D8BQ0IIM8 1120 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 C11orf91Q3C1V1 193 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 KRT25Q7Z3Z0 450 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 DTWD1Q8N5C7 304 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 GALNT11Q8NCW6 608 aa4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 TLR7Q9NYK1 1049 aaKnown RBP4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 RTCBQ9Y3I0 505 aaKnown RBP4.32□□□□□ -1.72
SNORA40.19-201ENST00000390846 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 RAD21O60216 631 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 NRLP54845 237 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 IGF2-ASQ6U949 168 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 PRR23CQ6ZRP0 262 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 TMEM130Q8N3G9 435 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 UBL7Q96S82 380 aaPredicted RBP4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 HINFPQ9BQA5 517 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 SMG9Q9H0W8 520 aaKnown RBP4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 KCNK4Q9NYG8 393 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 RNF112Q9ULX5 631 aa4.31□□□□□ -1.72
SNORA40.19-201ENST00000390846 F8W735 103 aaPredicted RBP4.3□□□□□ -1.72
SNORA40.19-201ENST00000390846 ZBTB39O15060 712 aa4.3□□□□□ -1.72
SNORA40.19-201ENST00000390846 FOXO3O43524 673 aa4.3□□□□□ -1.72
SNORA40.19-201ENST00000390846 WISP1O95388 367 aa4.3□□□□□ -1.72
SNORA40.19-201ENST00000390846 ARSDP51689 593 aa4.3□□□□□ -1.72
SNORA40.19-201ENST00000390846 NEUROD1Q13562 356 aa4.3□□□□□ -1.72
SNORA40.19-201ENST00000390846 LMOD1P29536 600 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 RAC1P63000 192 aa4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 HIF1AQ16665 826 aa4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 TREML1Q86YW5 311 aa4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 ARMC10Q8N2F6 343 aa4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 COL26A1Q96A83 441 aa4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 VRTNQ9H8Y1 702 aa4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 TRIM33Q9UPN9 1127 aa4.29□□□□□ -1.72
SNORA40.19-201ENST00000390846 LOC102724428A0A0B4J2F2 783 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 RARAP10276 462 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 CD97P48960 835 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 SIK1P57059 783 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 CDCA8Q53HL2 280 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 LARP1Q6PKG0 1096 aaKnown RBP4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 PLD4Q96BZ4 506 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 PRIMPOLQ96LW4 560 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 CHMP3Q9Y3E7 222 aa4.28□□□□□ -1.72
SNORA40.19-201ENST00000390846 SCO2A0A1W2PP80 73 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms