RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 FOXD4L3Q6VB84 417 aaPredicted RBP8.48□□□□□ -1.05
TRAV35-201ENST00000390462 SLC4A9Q96Q91 983 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 FEZ1Q99689 392 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 MAF1Q9H063 256 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 PRKAG3Q9UGI9 489 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 ADAMTS1Q9UHI8 967 aa8.48□□□□□ -1.05
TRAV35-201ENST00000390462 KIF3BO15066 747 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 SOX9P48436 509 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 SETQ01105 290 aaPredicted RBP8.47□□□□□ -1.05
TRAV35-201ENST00000390462 FOXK2Q01167 660 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 FAM50AQ14320 339 aaKnown RBP8.47□□□□□ -1.05
TRAV35-201ENST00000390462 LONRF3Q496Y0 759 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 TBCELQ5QJ74 424 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 ZFYVE27Q5T4F4 411 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 PTCRAQ6ISU1 281 aaPredicted RBP8.47□□□□□ -1.05
TRAV35-201ENST00000390462 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 SLC9A9Q8IVB4 645 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 ETFBKMTQ8IXQ9 262 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 KCTD12Q96CX2 325 aaKnown RBP8.47□□□□□ -1.05
TRAV35-201ENST00000390462 CDV3Q9UKY7 258 aaKnown RBP8.47□□□□□ -1.05
TRAV35-201ENST00000390462 MSRB2Q9Y3D2 182 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 COMMD10Q9Y6G5 202 aa8.47□□□□□ -1.05
TRAV35-201ENST00000390462 EXOSC10Q01780 885 aaKnown RBP8.46□□□□□ -1.06
TRAV35-201ENST00000390462 IFRD2Q12894 506 aaPredicted RBP8.46□□□□□ -1.06
TRAV35-201ENST00000390462 KRT26Q7Z3Y9 468 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 NME8Q8N427 588 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 CPLX3Q8WVH0 158 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 FOXJ1Q92949 421 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 MTRQ99707 1265 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 RSRP1Q9BUV0 290 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 SCHIP1Q9P0W5 487 aaPredicted RBP8.46□□□□□ -1.06
TRAV35-201ENST00000390462 PNMA2Q9UL42 364 aa8.46□□□□□ -1.06
TRAV35-201ENST00000390462 LAS1LQ9Y4W2 734 aaKnown RBP8.46□□□□□ -1.06
TRAV35-201ENST00000390462 DCAF1Q9Y4B6 1507 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 NOS2P35228 1153 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 EVA1CP58658 441 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 RAB15P59190 212 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 PSMA6P60900 246 aaKnown RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 OS9Q13438 667 aaPredicted RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 SQSTM1Q13501 440 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 COL9A2Q14055 689 aaPredicted RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 C11orf91Q3C1V1 193 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 C8orf34Q49A92 452 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 C11orf96Q7Z7L8 435 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 RAVER1Q8IY67 606 aaKnown RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 TTC16Q8NEE8 873 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 EPS8L3Q8TE67 593 aaKnown RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 TSR2Q969E8 191 aaKnown RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 CCDC74AQ96AQ1 378 aa8.45□□□□□ -1.06
TRAV35-201ENST00000390462 EAF1Q96JC9 268 aaPredicted RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 NOC4LQ9BVI4 516 aaKnown RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 ZCCHC6Q5VYS8 1495 aaKnown RBP8.45□□□□□ -1.06
TRAV35-201ENST00000390462 GNALP38405 381 aa8.44□□□□□ -1.06
TRAV35-201ENST00000390462 WDR75Q8IWA0 830 aaKnown RBP8.44□□□□□ -1.06
TRAV35-201ENST00000390462 PNISRQ8TF01 805 aaKnown RBP8.44□□□□□ -1.06
TRAV35-201ENST00000390462 ANAPC16Q96DE5 110 aa8.44□□□□□ -1.06
TRAV35-201ENST00000390462 APBA2Q99767 749 aa8.44□□□□□ -1.06
TRAV35-201ENST00000390462 C1QTNF2Q9BXJ5 285 aa8.44□□□□□ -1.06
TRAV35-201ENST00000390462 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
TRAV35-201ENST00000390462 ETNK1Q9HBU6 452 aa8.44□□□□□ -1.06
TRAV35-201ENST00000390462 CHMP3Q9Y3E7 222 aa8.44□□□□□ -1.06
TRAV35-201ENST00000390462 A6NJY4 79 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 IRS1P35568 1242 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 ERVK-9P63128 1117 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 PWP1Q13610 501 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 TKFCQ3LXA3 575 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 BRDTQ58F21 947 aaPredicted RBP8.43□□□□□ -1.06
TRAV35-201ENST00000390462 RELL1Q8IUW5 271 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 CCDC24Q8N4L8 307 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 BAP1Q92560 729 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 EMID1Q96A84 441 aaPredicted RBP8.43□□□□□ -1.06
TRAV35-201ENST00000390462 NUDT16Q96DE0 195 aaKnown RBP8.43□□□□□ -1.06
TRAV35-201ENST00000390462 NGLY1Q96IV0 654 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 OSBPL3Q9H4L5 887 aa8.43□□□□□ -1.06
TRAV35-201ENST00000390462 POTEMA6NI47 508 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 PLIN1O60240 522 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 CAND2O75155 1236 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 EIF4A3P38919 411 aaKnown RBP8.42□□□□□ -1.06
TRAV35-201ENST00000390462 CDKN1CP49918 316 aaPredicted RBP8.42□□□□□ -1.06
TRAV35-201ENST00000390462 USPL1Q5W0Q7 1092 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 JAMLQ86YT9 394 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
TRAV35-201ENST00000390462 GPR152Q8TDT2 470 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 IFT43Q96FT9 208 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 IL21Q9HBE4 155 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 GNL3LQ9NVN8 582 aaKnown RBP8.42□□□□□ -1.06
TRAV35-201ENST00000390462 ATP8A1Q9Y2Q0 1164 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 LEMD3Q9Y2U8 911 aa8.42□□□□□ -1.06
TRAV35-201ENST00000390462 THOC2Q8NI27 1593 aaKnown RBP8.41□□□□□ -1.06
TRAV35-201ENST00000390462 A6NHS1 94 aa8.41□□□□□ -1.06
TRAV35-201ENST00000390462 SMAD7O15105 426 aaKnown RBP8.41□□□□□ -1.06
TRAV35-201ENST00000390462 WDHD1O75717 1129 aaPredicted RBP8.41□□□□□ -1.06
TRAV35-201ENST00000390462 RPLP1P05386 114 aaKnown RBP8.41□□□□□ -1.06
TRAV35-201ENST00000390462 HDAC1Q13547 482 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms