RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 SCNN1DP51172 638 aa13.88□□□□□ -0.19
TRAV4-201ENST00000390426 GNAI1P63096 354 aa13.88□□□□□ -0.19
TRAV4-201ENST00000390426 VPS33BQ9H267 617 aa13.88□□□□□ -0.19
TRAV4-201ENST00000390426 PHAXQ9H814 394 aaKnown RBP13.88□□□□□ -0.19
TRAV4-201ENST00000390426 ANKRD36CQ5JPF3 1778 aa13.88□□□□□ -0.19
TRAV4-201ENST00000390426 CALD1Q05682 793 aaKnown RBP13.87□□□□□ -0.19
TRAV4-201ENST00000390426 CXCL9Q07325 125 aa13.87□□□□□ -0.19
TRAV4-201ENST00000390426 CCDC184Q52MB2 194 aa13.87□□□□□ -0.19
TRAV4-201ENST00000390426 RIC3Q7Z5B4 369 aa13.87□□□□□ -0.19
TRAV4-201ENST00000390426 C8orf58Q8NAV2 365 aa13.87□□□□□ -0.19
TRAV4-201ENST00000390426 ZNRF3Q9ULT6 936 aa13.87□□□□□ -0.19
TRAV4-201ENST00000390426 CNTNAP1P78357 1384 aa13.86□□□□□ -0.19
TRAV4-201ENST00000390426 IRS4O14654 1257 aaPredicted RBP13.86□□□□□ -0.19
TRAV4-201ENST00000390426 FMR1Q06787 632 aaKnown RBP eCLIP13.86□□□□□ -0.19
TRAV4-201ENST00000390426 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
TRAV4-201ENST00000390426 KIAA2012Q0VF49 1180 aa13.86□□□□□ -0.19
TRAV4-201ENST00000390426 CELF1Q92879 486 aaKnown RBP13.86□□□□□ -0.19
TRAV4-201ENST00000390426 LAMB2P55268 1798 aa13.86□□□□□ -0.19
TRAV4-201ENST00000390426 ADAMTSL1Q8N6G6 1762 aa13.86□□□□□ -0.19
TRAV4-201ENST00000390426 LTBP1Q14766 1721 aa13.85□□□□□ -0.19
TRAV4-201ENST00000390426 RAD17O75943 681 aa13.85□□□□□ -0.19
TRAV4-201ENST00000390426 VEGFBP49765 207 aa13.85□□□□□ -0.19
TRAV4-201ENST00000390426 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
TRAV4-201ENST00000390426 TRIM28Q13263 835 aaKnown RBP13.85□□□□□ -0.19
TRAV4-201ENST00000390426 SF3B3Q15393 1217 aaKnown RBP13.85□□□□□ -0.19
TRAV4-201ENST00000390426 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
TRAV4-201ENST00000390426 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
TRAV4-201ENST00000390426 TMC4Q7Z404 712 aa13.84□□□□□ -0.19
TRAV4-201ENST00000390426 TNS4Q8IZW8 715 aa13.84□□□□□ -0.19
TRAV4-201ENST00000390426 JARID2Q92833 1246 aaPredicted RBP13.84□□□□□ -0.19
TRAV4-201ENST00000390426 MYD88Q99836 296 aa13.84□□□□□ -0.19
TRAV4-201ENST00000390426 ADARB2Q9NS39 739 aaKnown RBP13.84□□□□□ -0.19
TRAV4-201ENST00000390426 GPRC5DQ9NZD1 345 aa13.84□□□□□ -0.19
TRAV4-201ENST00000390426 TAF1P21675 1872 aa13.83□□□□□ -0.2
TRAV4-201ENST00000390426 TNIP1Q15025 636 aa13.83□□□□□ -0.2
TRAV4-201ENST00000390426 DEFB115Q30KQ5 88 aa13.83□□□□□ -0.2
TRAV4-201ENST00000390426 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
TRAV4-201ENST00000390426 ZBTB38Q8NAP3 1195 aaPredicted RBP13.83□□□□□ -0.2
TRAV4-201ENST00000390426 BCL2L13Q9BXK5 485 aa13.83□□□□□ -0.2
TRAV4-201ENST00000390426 ABT1Q9ULW3 272 aaKnown RBP13.83□□□□□ -0.2
TRAV4-201ENST00000390426 NSFL1CQ9UNZ2 370 aaKnown RBP13.83□□□□□ -0.2
TRAV4-201ENST00000390426 YDJCA8MPS7 323 aa13.82□□□□□ -0.2
TRAV4-201ENST00000390426 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
TRAV4-201ENST00000390426 TRAF5O00463 557 aa13.82□□□□□ -0.2
TRAV4-201ENST00000390426 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
TRAV4-201ENST00000390426 GPSM2P81274 684 aa13.82□□□□□ -0.2
TRAV4-201ENST00000390426 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
TRAV4-201ENST00000390426 TSR2Q969E8 191 aaKnown RBP13.82□□□□□ -0.2
TRAV4-201ENST00000390426 DDX60Q8IY21 1712 aaKnown RBP13.81□□□□□ -0.2
TRAV4-201ENST00000390426 RASSF10A6NK89 507 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 FOXN1O15353 648 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 CAPN15O75808 1086 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 RPS8P62241 208 aaKnown RBP13.81□□□□□ -0.2
TRAV4-201ENST00000390426 WASHC4Q2M389 1173 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 CCDC191Q8NCU4 936 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 SEC31BQ9NQW1 1179 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 POLLQ9UGP5 575 aa13.81□□□□□ -0.2
TRAV4-201ENST00000390426 COL4A1P02462 1669 aa13.8□□□□□ -0.2
TRAV4-201ENST00000390426 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
TRAV4-201ENST00000390426 DDX58O95786 925 aaKnown RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 PCCAP05165 728 aaPredicted RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 DOK7Q18PE1 504 aa13.8□□□□□ -0.2
TRAV4-201ENST00000390426 GPR101Q96P66 508 aaPredicted RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 CWC25Q9NXE8 425 aaPredicted RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 CNOT7Q9UIV1 285 aaKnown RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 ZBTB12Q9Y330 459 aaPredicted RBP13.8□□□□□ -0.2
TRAV4-201ENST00000390426 DUOX1Q9NRD9 1551 aa13.79□□□□□ -0.2
TRAV4-201ENST00000390426 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
TRAV4-201ENST00000390426 CST9Q5W186 159 aa13.79□□□□□ -0.2
TRAV4-201ENST00000390426 PAXIP1Q6ZW49 1069 aaPredicted RBP13.79□□□□□ -0.2
TRAV4-201ENST00000390426 TRPM4Q8TD43 1214 aa13.79□□□□□ -0.2
TRAV4-201ENST00000390426 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
TRAV4-201ENST00000390426 CHMP4AQ9BY43 222 aa13.79□□□□□ -0.2
TRAV4-201ENST00000390426 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
TRAV4-201ENST00000390426 WDR33Q9C0J8 1336 aaKnown RBP13.79□□□□□ -0.2
TRAV4-201ENST00000390426 H7C1D1 291 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 PSMD14O00487 310 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 PDE8AO60658 829 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
TRAV4-201ENST00000390426 GRM1Q13255 1194 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 CCDC152Q4G0S7 254 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 WWC1Q8IX03 1113 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 TBC1D16Q8TBP0 767 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 EYA3Q99504 573 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 GLIS2Q9BZE0 524 aaPredicted RBP13.78□□□□□ -0.2
TRAV4-201ENST00000390426 KCNQ5Q9NR82 932 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 WBP1LQ9NX94 342 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 CDHR2Q9BYE9 1310 aa13.78□□□□□ -0.2
TRAV4-201ENST00000390426 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 LRRC37AA6NMS7 1700 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 ECE2O60344 883 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 CCDC27Q2M243 656 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.21
TRAV4-201ENST00000390426 CYP4F22Q6NT55 531 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 MICALL2Q8IY33 904 aa13.77□□□□□ -0.21
TRAV4-201ENST00000390426 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms