RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
TRAPPC9-201ENST00000389328 SYKP43405 635 aa15.22■□□□□ 0.03
TRAPPC9-201ENST00000389328 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-201ENST00000389328 YTHDC2Q9H6S0 1430 aaKnown RBP15.22■□□□□ 0.03
TRAPPC9-201ENST00000389328 SLC27A2O14975 620 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 JAK2O60674 1132 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 PTPDC1A2A3K4 754 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 GRM8O00222 908 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 ZC3H6P61129 1189 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 PTH1RQ03431 593 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 VPS37DQ86XT2 251 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 CABP4P57796 275 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 KIAA1524Q8TCG1 905 aa15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 ZNF215Q9UL58 517 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC9-201ENST00000389328 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.02
TRAPPC9-201ENST00000389328 ZNHIT6Q9NWK9 470 aaKnown RBP15.21■□□□□ 0.02
TRAPPC9-201ENST00000389328 UGGT1Q9NYU2 1555 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 MAGEC2Q9UBF1 373 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 KLF18A0A0U1RQI7 1052 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 ZNF213O14771 459 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 AMOTL2Q9Y2J4 779 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 MAP3K19Q56UN5 1328 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 NR1I2O75469 434 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 RPS6KB1P23443 525 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 GABPB1Q06547 395 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
TRAPPC9-201ENST00000389328 UTP14AQ9BVJ6 771 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 USP44Q9H0E7 712 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 KIF24Q5T7B8 1368 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 MCMDC2Q4G0Z9 681 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 CCDC102BQ68D86 513 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 CCDC129Q6ZRS4 1044 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 KLHDC4Q8TBB5 520 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 RGS12O14924 1447 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 VGLL3A8MV65 326 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 CLEC17AQ6ZS10 378 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 KCNG4Q8TDN1 519 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 CRACR2AQ9BSW2 395 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 SPTLC2O15270 562 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 SAMD9LQ8IVG5 1584 aa15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 CFAP65Q6ZU64 1925 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-201ENST00000389328 PIP4K2AP48426 406 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 EVA1CP58658 441 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 KSR2Q6VAB6 950 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 GBP3Q9H0R5 595 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 DEF6Q9H4E7 631 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 OSBPL3Q9H4L5 887 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 TXLNBQ8N3L3 684 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 NCOA5Q9HCD5 579 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 NDUFB9Q9Y6M9 179 aa15.18■□□□□ 0.02
TRAPPC9-201ENST00000389328 TXLNAP40222 546 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 FAM160A1Q05DH4 1040 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 TPCN1Q9ULQ1 816 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 AOX1Q06278 1338 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 TTC37Q6PGP7 1564 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 KARSQ15046 597 aaKnown RBP15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 TDO2P48775 406 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 KIAA1328Q86T90 577 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 ALDH1L1O75891 902 aa15.17■□□□□ 0.02
TRAPPC9-201ENST00000389328 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 CCDC181Q5TID7 509 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 OTUD7BQ6GQQ9 843 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 GOLGA6L9A6NEM1 432 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 ERCC6LQ2NKX8 1250 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 PLCD3Q8N3E9 789 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 AIDAQ96BJ3 306 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 PHACTR2O75167 634 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 EVCP57679 992 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 SLC39A6Q13433 755 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 AMOTQ4VCS5 1084 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 MRVI1Q9Y6F6 885 aa15.16■□□□□ 0.02
TRAPPC9-201ENST00000389328 RDXP35241 583 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 COPS6Q7L5N1 327 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 DHX32Q7L7V1 743 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 BICC1Q9H694 974 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 KIAA0754O94854 1291 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 EIF5P55010 431 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 ATP2B3Q16720 1220 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 CCDC148Q8NFR7 591 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 LINS1Q8NG48 757 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 XAGE3Q8WTP9 111 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 EDC3Q96F86 508 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 NUP88Q99567 741 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 UBAC1Q9BSL1 405 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 CARD6Q9BX69 1037 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 NACAP1Q9BZK3 213 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 GOLGA8AA7E2F4 631 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 C10orf67Q8IYJ2 551 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 A0A087WWV3 80 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 CYP2E1P05181 493 aaPredicted RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 SSH3Q8TE77 659 aa15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 PUF60Q9UHX1 559 aaKnown RBP15.15■□□□□ 0.02
TRAPPC9-201ENST00000389328 LARGE1O95461 756 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms