RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
LTN1-203ENST00000389195 SSFA2P28290 1259 aa12.32□□□□□ -0.44
LTN1-203ENST00000389195 FKBP4Q02790 459 aaKnown RBP eCLIP12.32□□□□□ -0.44
LTN1-203ENST00000389195 TAF5LO75529 589 aa12.32□□□□□ -0.44
LTN1-203ENST00000389195 SCARF1Q14162 830 aa12.32□□□□□ -0.44
LTN1-203ENST00000389195 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
LTN1-203ENST00000389195 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
LTN1-203ENST00000389195 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
LTN1-203ENST00000389195 PALLDQ8WX93 1383 aa12.32□□□□□ -0.44
LTN1-203ENST00000389195 A0A1B0GUL7 405 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 ITGA6P23229 1130 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 PHF14O94880 888 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 VSIG10Q8N0Z9 540 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 ZBTB38Q8NAP3 1195 aaPredicted RBP12.31□□□□□ -0.44
LTN1-203ENST00000389195 TTLL11Q8NHH1 800 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 SNX21Q969T3 373 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 SRP68Q9UHB9 627 aaKnown RBP12.31□□□□□ -0.44
LTN1-203ENST00000389195 TTC41PQ6P2S7 1318 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 MYH14Q7Z406 1995 aaKnown RBP12.31□□□□□ -0.44
LTN1-203ENST00000389195 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
LTN1-203ENST00000389195 RABEP1Q15276 862 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 TEX13AQ9BXU3 409 aaPredicted RBP12.31□□□□□ -0.44
LTN1-203ENST00000389195 CCDC87Q9NVE4 849 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 HDAC5Q9UQL6 1122 aa12.31□□□□□ -0.44
LTN1-203ENST00000389195 ERBB4Q15303 1308 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 LRP6O75581 1613 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 EYA2O00167 538 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 EIF5P55010 431 aaKnown RBP12.3□□□□□ -0.44
LTN1-203ENST00000389195 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
LTN1-203ENST00000389195 LDHAL6AQ6ZMR3 332 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
LTN1-203ENST00000389195 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
LTN1-203ENST00000389195 SNX14Q9Y5W7 946 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 TUBGCP6Q96RT7 1819 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 KCNJ4P48050 445 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 VPS53Q5VIR6 699 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 KIAA1211Q6ZU35 1233 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 COL15A1P39059 1388 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 SLIT2O94813 1529 aa12.3□□□□□ -0.44
LTN1-203ENST00000389195 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
LTN1-203ENST00000389195 EVI5LQ96CN4 794 aa12.29□□□□□ -0.44
LTN1-203ENST00000389195 IQSEC3Q9UPP2 1182 aaPredicted RBP12.29□□□□□ -0.44
LTN1-203ENST00000389195 PAPPAQ13219 1627 aa12.29□□□□□ -0.44
LTN1-203ENST00000389195 TMX3Q96JJ7 454 aa12.29□□□□□ -0.44
LTN1-203ENST00000389195 CASTP20810 708 aaKnown RBP12.28□□□□□ -0.44
LTN1-203ENST00000389195 GORABQ5T7V8 394 aa12.28□□□□□ -0.44
LTN1-203ENST00000389195 CERKQ8TCT0 537 aa12.28□□□□□ -0.44
LTN1-203ENST00000389195 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
LTN1-203ENST00000389195 CHMP5Q9NZZ3 219 aa12.28□□□□□ -0.44
LTN1-203ENST00000389195 THRAP3Q9Y2W1 955 aaKnown RBP12.28□□□□□ -0.44
LTN1-203ENST00000389195 COL22A1Q8NFW1 1626 aaPredicted RBP12.28□□□□□ -0.44
LTN1-203ENST00000389195 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
LTN1-203ENST00000389195 HSPA4P34932 840 aa12.28□□□□□ -0.44
LTN1-203ENST00000389195 CEP126Q9P2H0 1117 aa12.28□□□□□ -0.44
LTN1-203ENST00000389195 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
LTN1-203ENST00000389195 TJP1Q07157 1748 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 AFF2P51816 1311 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 USP42Q9H9J4 1324 aaKnown RBP12.27□□□□□ -0.44
LTN1-203ENST00000389195 ST18O60284 1047 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 LARGE1O95461 756 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 DDIT3P35638 169 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 IL6STP40189 918 aaPredicted RBP12.27□□□□□ -0.44
LTN1-203ENST00000389195 METTL24Q5JXM2 366 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 BARGINQ6ZT62 677 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 XAGE2Q96GT9 111 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 JAKMIP1Q96N16 626 aaKnown RBP12.27□□□□□ -0.44
LTN1-203ENST00000389195 LRRC2Q9BYS8 371 aa12.27□□□□□ -0.44
LTN1-203ENST00000389195 RBM8AQ9Y5S9 174 aaKnown RBP12.27□□□□□ -0.44
LTN1-203ENST00000389195 AOX1Q06278 1338 aa12.27□□□□□ -0.45
LTN1-203ENST00000389195 RAD50Q92878 1312 aa12.27□□□□□ -0.45
LTN1-203ENST00000389195 CAMTA2O94983 1202 aa12.27□□□□□ -0.45
LTN1-203ENST00000389195 CTSWP56202 376 aa12.27□□□□□ -0.45
LTN1-203ENST00000389195 VPS72Q15906 364 aa12.27□□□□□ -0.45
LTN1-203ENST00000389195 NRAPQ86VF7 1730 aa12.26□□□□□ -0.45
LTN1-203ENST00000389195 IFIT1P09914 478 aaKnown RBP12.26□□□□□ -0.45
LTN1-203ENST00000389195 ATP5JP18859 108 aa12.26□□□□□ -0.45
LTN1-203ENST00000389195 IL15P40933 162 aaPredicted RBP12.26□□□□□ -0.45
LTN1-203ENST00000389195 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
LTN1-203ENST00000389195 FNBP4Q8N3X1 1017 aaPredicted RBP12.26□□□□□ -0.45
LTN1-203ENST00000389195 JCADQ9P266 1359 aa12.26□□□□□ -0.45
LTN1-203ENST00000389195 GNPATO15228 680 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 NECAB1Q8N987 351 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 CSF1RP07333 972 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 MCCP23508 829 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 MCM4P33991 863 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 ZAP70P43403 619 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 AK2P54819 239 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 USPL1Q5W0Q7 1092 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 CHST3Q7LGC8 479 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 CDCA7Q9BWT1 371 aaPredicted RBP12.25□□□□□ -0.45
LTN1-203ENST00000389195 TAF1P21675 1872 aa12.25□□□□□ -0.45
LTN1-203ENST00000389195 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 TTLL5Q6EMB2 1281 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
LTN1-203ENST00000389195 PAG1Q9NWQ8 432 aa12.24□□□□□ -0.45
LTN1-203ENST00000389195 RIPOR2Q9Y4F9 1068 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms