RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CALD1Q05682 793 aaKnown RBP34.28■■■■□ 3.08
NPHP3-202ENST00000383282 ISCA1Q9BUE6 129 aa34.27■■■■□ 3.08
NPHP3-202ENST00000383282 ZNF428Q96B54 188 aa34.26■■■■□ 3.08
NPHP3-202ENST00000383282 ATP5J2-PTCD1G3V325 749 aa34.25■■■■□ 3.07
NPHP3-202ENST00000383282 APAF1O14727 1248 aa34.25■■■■□ 3.07
NPHP3-202ENST00000383282 VEGFBP49765 207 aa34.25■■■■□ 3.07
NPHP3-202ENST00000383282 KIAA2012Q0VF49 1180 aa34.25■■■■□ 3.07
NPHP3-202ENST00000383282 IFT57Q9NWB7 429 aa34.25■■■■□ 3.07
NPHP3-202ENST00000383282 LTBP1Q14766 1721 aa34.24■■■■□ 3.07
NPHP3-202ENST00000383282 LAMB2P55268 1798 aa34.24■■■■□ 3.07
NPHP3-202ENST00000383282 GNAI1P63096 354 aa34.24■■■■□ 3.07
NPHP3-202ENST00000383282 CXCL9Q07325 125 aa34.24■■■■□ 3.07
NPHP3-202ENST00000383282 FAM89AQ96GI7 184 aa34.24■■■■□ 3.07
NPHP3-202ENST00000383282 ZNF853P0CG23 659 aa34.23■■■■□ 3.07
NPHP3-202ENST00000383282 DEFB115Q30KQ5 88 aa34.23■■■■□ 3.07
NPHP3-202ENST00000383282 ADARB2Q9NS39 739 aaKnown RBP34.23■■■■□ 3.07
NPHP3-202ENST00000383282 GPRC5DQ9NZD1 345 aa34.23■■■■□ 3.07
NPHP3-202ENST00000383282 ABT1Q9ULW3 272 aaKnown RBP34.23■■■■□ 3.07
NPHP3-202ENST00000383282 CIAPIN1Q6FI81 312 aa34.22■■■■□ 3.07
NPHP3-202ENST00000383282 AIDAQ96BJ3 306 aa34.22■■■■□ 3.07
NPHP3-202ENST00000383282 RASSF10A6NK89 507 aa34.21■■■■□ 3.07
NPHP3-202ENST00000383282 GOLGA2Q08379 1002 aa34.21■■■■□ 3.07
NPHP3-202ENST00000383282 SF3B3Q15393 1217 aaKnown RBP34.21■■■■□ 3.07
NPHP3-202ENST00000383282 RIC3Q7Z5B4 369 aa34.21■■■■□ 3.07
NPHP3-202ENST00000383282 TRIM28Q13263 835 aaKnown RBP34.2■■■■□ 3.07
NPHP3-202ENST00000383282 TNIP1Q15025 636 aa34.2■■■■□ 3.07
NPHP3-202ENST00000383282 GMPSP49915 693 aaPredicted RBP34.18■■■■□ 3.06
NPHP3-202ENST00000383282 BCL2L13Q9BXK5 485 aa34.18■■■■□ 3.06
NPHP3-202ENST00000383282 RTL5Q5HYW3 569 aaPredicted RBP34.17■■■■□ 3.06
NPHP3-202ENST00000383282 CHMP4AQ9BY43 222 aa34.17■■■■□ 3.06
NPHP3-202ENST00000383282 CDHR2Q9BYE9 1310 aa34.17■■■■□ 3.06
NPHP3-202ENST00000383282 ELL2O00472 640 aaPredicted RBP34.16■■■■□ 3.06
NPHP3-202ENST00000383282 IRS4O14654 1257 aaPredicted RBP34.16■■■■□ 3.06
NPHP3-202ENST00000383282 FOXN1O15353 648 aa34.16■■■■□ 3.06
NPHP3-202ENST00000383282 CAPN15O75808 1086 aa34.16■■■■□ 3.06
NPHP3-202ENST00000383282 RAD17O75943 681 aa34.16■■■■□ 3.06
NPHP3-202ENST00000383282 HSP90B1P14625 803 aaKnown RBP34.16■■■■□ 3.06
NPHP3-202ENST00000383282 CELF1Q92879 486 aaKnown RBP34.16■■■■□ 3.06
NPHP3-202ENST00000383282 NSFL1CQ9UNZ2 370 aaKnown RBP34.15■■■■□ 3.06
NPHP3-202ENST00000383282 DDX60Q8IY21 1712 aaKnown RBP34.14■■■■□ 3.06
NPHP3-202ENST00000383282 PHAXQ9H814 394 aaKnown RBP34.14■■■■□ 3.06
NPHP3-202ENST00000383282 CTCFP49711 727 aaPredicted RBP34.13■■■■□ 3.05
NPHP3-202ENST00000383282 WASHC4Q2M389 1173 aa34.13■■■■□ 3.05
NPHP3-202ENST00000383282 ZBTB38Q8NAP3 1195 aaPredicted RBP34.13■■■■□ 3.05
NPHP3-202ENST00000383282 WDR33Q9C0J8 1336 aaKnown RBP34.12■■■■□ 3.05
NPHP3-202ENST00000383282 FMR1Q06787 632 aaKnown RBP eCLIP34.11■■■■□ 3.05
NPHP3-202ENST00000383282 MYD88Q99836 296 aa34.11■■■■□ 3.05
NPHP3-202ENST00000383282 WBP1LQ9NX94 342 aa34.11■■■■□ 3.05
NPHP3-202ENST00000383282 YDJCA8MPS7 323 aa34.1■■■■□ 3.05
NPHP3-202ENST00000383282 PAXIP1Q6ZW49 1069 aaPredicted RBP34.1■■■■□ 3.05
NPHP3-202ENST00000383282 EYA3Q99504 573 aa34.1■■■■□ 3.05
NPHP3-202ENST00000383282 PRDM10Q9NQV6 1147 aa34.1■■■■□ 3.05
NPHP3-202ENST00000383282 DUOX1Q9NRD9 1551 aa34.1■■■■□ 3.05
NPHP3-202ENST00000383282 LRRC37AA6NMS7 1700 aa34.1■■■■□ 3.05
NPHP3-202ENST00000383282 C6orf229H3BNL8 230 aa34.09■■■■□ 3.05
NPHP3-202ENST00000383282 TRAF5O00463 557 aa34.09■■■■□ 3.05
NPHP3-202ENST00000383282 DDX58O95786 925 aaKnown RBP34.09■■■■□ 3.05
NPHP3-202ENST00000383282 ECE1P42892 770 aa34.09■■■■□ 3.05
NPHP3-202ENST00000383282 RPS8P62241 208 aaKnown RBP34.09■■■■□ 3.05
NPHP3-202ENST00000383282 MAP2K1Q02750 393 aaPredicted RBP34.09■■■■□ 3.05
NPHP3-202ENST00000383282 CCDC30Q5VVM6 783 aa34.09■■■■□ 3.05
NPHP3-202ENST00000383282 TAF1P21675 1872 aa34.09■■■■□ 3.05
NPHP3-202ENST00000383282 C8orf58Q8NAV2 365 aa34.08■■■■□ 3.05
NPHP3-202ENST00000383282 CCDC191Q8NCU4 936 aa34.08■■■■□ 3.05
NPHP3-202ENST00000383282 ZC3H15Q8WU90 426 aaKnown RBP34.08■■■■□ 3.05
NPHP3-202ENST00000383282 H7C1D1 291 aa34.07■■■■□ 3.04
NPHP3-202ENST00000383282 GPSM2P81274 684 aa34.07■■■■□ 3.04
NPHP3-202ENST00000383282 CNOT7Q9UIV1 285 aaKnown RBP34.07■■■■□ 3.04
NPHP3-202ENST00000383282 RIMBP2O15034 1052 aa34.06■■■■□ 3.04
NPHP3-202ENST00000383282 CST9Q5W186 159 aa34.06■■■■□ 3.04
NPHP3-202ENST00000383282 DBNDD1Q9H9R9 158 aa34.06■■■■□ 3.04
NPHP3-202ENST00000383282 POLLQ9UGP5 575 aa34.06■■■■□ 3.04
NPHP3-202ENST00000383282 PCCAP05165 728 aaPredicted RBP34.05■■■■□ 3.04
NPHP3-202ENST00000383282 CAPNS2Q96L46 248 aa34.05■■■■□ 3.04
NPHP3-202ENST00000383282 CWC25Q9NXE8 425 aaPredicted RBP34.05■■■■□ 3.04
NPHP3-202ENST00000383282 PGAP2Q9UHJ9 254 aa34.05■■■■□ 3.04
NPHP3-202ENST00000383282 TLL2Q9Y6L7 1015 aa34.05■■■■□ 3.04
NPHP3-202ENST00000383282 CCDC152Q4G0S7 254 aa34.04■■■■□ 3.04
NPHP3-202ENST00000383282 MICALL2Q8IY33 904 aa34.03■■■■□ 3.04
NPHP3-202ENST00000383282 DPF2Q92785 391 aa34.03■■■■□ 3.04
NPHP3-202ENST00000383282 METTL22Q9BUU2 404 aaPredicted RBP34.03■■■■□ 3.04
NPHP3-202ENST00000383282 GLIS2Q9BZE0 524 aaPredicted RBP34.03■■■■□ 3.04
NPHP3-202ENST00000383282 PSMD14O00487 310 aa34.02■■■■□ 3.04
NPHP3-202ENST00000383282 PDE8AO60658 829 aa34.02■■■■□ 3.04
NPHP3-202ENST00000383282 CELF2O95319 508 aaKnown RBP34.02■■■■□ 3.04
NPHP3-202ENST00000383282 GRM1Q13255 1194 aa34.02■■■■□ 3.04
NPHP3-202ENST00000383282 TBC1D16Q8TBP0 767 aa34.02■■■■□ 3.04
NPHP3-202ENST00000383282 TRPM4Q8TD43 1214 aa34.02■■■■□ 3.04
NPHP3-202ENST00000383282 ECE2O60344 883 aa34.01■■■■□ 3.03
NPHP3-202ENST00000383282 HIRAP54198 1017 aaPredicted RBP34.01■■■■□ 3.03
NPHP3-202ENST00000383282 CYP4F22Q6NT55 531 aa34.01■■■■□ 3.03
NPHP3-202ENST00000383282 CDC37L1Q7L3B6 337 aa34.01■■■■□ 3.03
NPHP3-202ENST00000383282 SEC31BQ9NQW1 1179 aa34.01■■■■□ 3.03
NPHP3-202ENST00000383282 ZBTB12Q9Y330 459 aaPredicted RBP34.01■■■■□ 3.03
NPHP3-202ENST00000383282 LBX1P52954 281 aa34■■■■□ 3.03
NPHP3-202ENST00000383282 TRPM7Q96QT4 1865 aa34■■■■□ 3.03
NPHP3-202ENST00000383282 ZC3H12CQ9C0D7 883 aaKnown RBP34■■■■□ 3.03
NPHP3-202ENST00000383282 RPS12P25398 132 aaKnown RBP33.99■■■■□ 3.03
NPHP3-202ENST00000383282 TSPYL6Q8N831 410 aa33.99■■■■□ 3.03
NPHP3-202ENST00000383282 GPR101Q96P66 508 aaPredicted RBP33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms