RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
SNPH-202ENST00000381873 TBC1D2Q9BYX2 928 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 METAP2P50579 478 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNPH-202ENST00000381873 CALML4Q96GE6 196 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
SNPH-202ENST00000381873 DDB1Q16531 1140 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 LMBR1LQ6UX01 489 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 GSTO1P78417 241 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 AMPD3Q01432 767 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 TTC22Q5TAA0 569 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 IP6K1Q92551 441 aa17.2■□□□□ 0.34
SNPH-202ENST00000381873 GRM8O00222 908 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 STX6O43752 255 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 SSFA2P28290 1259 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 MCM5P33992 734 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 ENOX2Q16206 610 aaKnown RBP17.19■□□□□ 0.34
SNPH-202ENST00000381873 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 PLEKHG1Q9ULL1 1385 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 MYO1BO43795 1136 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
SNPH-202ENST00000381873 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 CETN1Q12798 172 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 PAXIP1Q6ZW49 1069 aaPredicted RBP17.19■□□□□ 0.34
SNPH-202ENST00000381873 SBNO1A3KN83 1393 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 KSR2Q6VAB6 950 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 CKAP2LQ8IYA6 745 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
SNPH-202ENST00000381873 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
SNPH-202ENST00000381873 GJB2P29033 226 aa17.18■□□□□ 0.34
SNPH-202ENST00000381873 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
SNPH-202ENST00000381873 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
SNPH-202ENST00000381873 ZSCAN30Q86W11 494 aa17.18■□□□□ 0.34
SNPH-202ENST00000381873 ARHGAP31Q2M1Z3 1444 aa17.18■□□□□ 0.34
SNPH-202ENST00000381873 RBM10P98175 930 aaKnown RBP17.18■□□□□ 0.34
SNPH-202ENST00000381873 PTPN14Q15678 1187 aa17.18■□□□□ 0.34
SNPH-202ENST00000381873 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
SNPH-202ENST00000381873 CARD14Q9BXL6 1004 aa17.18■□□□□ 0.34
SNPH-202ENST00000381873 PYM1Q9BRP8 204 aaKnown RBP17.17■□□□□ 0.34
SNPH-202ENST00000381873 ARHGEF10O15013 1369 aa17.17■□□□□ 0.34
SNPH-202ENST00000381873 ZGPATQ8N5A5 531 aaKnown RBP17.17■□□□□ 0.34
SNPH-202ENST00000381873 SLC26A6Q9BXS9 759 aa17.17■□□□□ 0.34
SNPH-202ENST00000381873 CYP7A1P22680 504 aa17.17■□□□□ 0.34
SNPH-202ENST00000381873 TMTC2Q8N394 836 aa17.17■□□□□ 0.34
SNPH-202ENST00000381873 BRF1Q92994 677 aa17.17■□□□□ 0.34
SNPH-202ENST00000381873 KIF5CO60282 957 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 GCP02774 474 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 TRAF1Q13077 416 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 HDAC1Q13547 482 aaPredicted RBP17.16■□□□□ 0.34
SNPH-202ENST00000381873 LINS1Q8NG48 757 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 KIAA0754O94854 1291 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 WTAPQ15007 396 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 TDRD12Q587J7 1177 aaKnown RBP17.16■□□□□ 0.34
SNPH-202ENST00000381873 PANK2Q9BZ23 570 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 MTIF2P46199 727 aaKnown RBP17.16■□□□□ 0.34
SNPH-202ENST00000381873 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 ANKRD44Q8N8A2 993 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 TNPO1Q92973 898 aaKnown RBP17.16■□□□□ 0.34
SNPH-202ENST00000381873 NIP7Q9Y221 180 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNPH-202ENST00000381873 TET3O43151 1660 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 FAM193AP78312 1265 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 STXBP4Q6ZWJ1 553 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 TRMT1LQ7Z2T5 733 aaKnown RBP17.16■□□□□ 0.34
SNPH-202ENST00000381873 CCDC150Q8NCX0 1101 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 ESR2Q92731 530 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 GBP3Q9H0R5 595 aa17.16■□□□□ 0.34
SNPH-202ENST00000381873 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 GOLGA6L7A0A1B0GV03 622 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 MYCNP04198 464 aaPredicted RBP17.15■□□□□ 0.34
SNPH-202ENST00000381873 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 GDPD2Q9HCC8 539 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 USO1O60763 962 aaKnown RBP17.15■□□□□ 0.34
SNPH-202ENST00000381873 TCERG1LQ5VWI1 586 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 KRT23Q9C075 422 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 IQSEC3Q9UPP2 1182 aaPredicted RBP17.15■□□□□ 0.34
SNPH-202ENST00000381873 KLF18A0A0U1RQI7 1052 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 IL2RBP14784 551 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 CCDC102BQ68D86 513 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 GBP2P32456 591 aaPredicted RBP17.15■□□□□ 0.34
SNPH-202ENST00000381873 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 RAB11FIP4Q86YS3 637 aa17.15■□□□□ 0.34
SNPH-202ENST00000381873 YEATS4O95619 227 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 CCDC178Q5BJE1 867 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 BIN1O00499 593 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 IGHDP01880 384 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 PDE1AP54750 535 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 KIF18AQ8NI77 898 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 CRACR2AQ9BSW2 395 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 SAMM50Q9Y512 469 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 ERVK-7P63135 1459 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 ZBTB43O43298 467 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 SDSP20132 328 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 ATP8B2P98198 1209 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
SNPH-202ENST00000381873 NUP88Q99567 741 aaPredicted RBP17.14■□□□□ 0.33
SNPH-202ENST00000381873 HOXC9P31274 260 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms