RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 NFKBIEO00221 500 aa20.47■□□□□ 0.87
SNRPB-201ENST00000381342 DPY19L2Q6NUT2 758 aa20.47■□□□□ 0.87
SNRPB-201ENST00000381342 RBM17Q96I25 401 aaKnown RBP20.47■□□□□ 0.87
SNRPB-201ENST00000381342 SPEF2Q9C093 1822 aa20.47■□□□□ 0.87
SNRPB-201ENST00000381342 ALDH1L1O75891 902 aa20.46■□□□□ 0.87
SNRPB-201ENST00000381342 TRIM27P14373 513 aa20.46■□□□□ 0.87
SNRPB-201ENST00000381342 RTKN2Q8IZC4 609 aa20.46■□□□□ 0.87
SNRPB-201ENST00000381342 ARHGAP45Q92619 1136 aa20.46■□□□□ 0.87
SNRPB-201ENST00000381342 RCAN3Q9UKA8 241 aa20.46■□□□□ 0.87
SNRPB-201ENST00000381342 ABCC4O15439 1325 aa20.46■□□□□ 0.87
SNRPB-201ENST00000381342 H7C1W4 665 aa20.45■□□□□ 0.86
SNRPB-201ENST00000381342 KIF3CO14782 793 aa20.45■□□□□ 0.86
SNRPB-201ENST00000381342 CASP7P55210 303 aa20.45■□□□□ 0.86
SNRPB-201ENST00000381342 ATF7IPQ6VMQ6 1270 aa20.45■□□□□ 0.86
SNRPB-201ENST00000381342 LTBP3Q9NS15 1303 aa20.45■□□□□ 0.86
SNRPB-201ENST00000381342 SBF1O95248 1867 aa20.44■□□□□ 0.86
SNRPB-201ENST00000381342 IPO8O15397 1037 aaKnown RBP20.44■□□□□ 0.86
SNRPB-201ENST00000381342 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
SNRPB-201ENST00000381342 CC2D2BQ6DHV5 1058 aa20.44■□□□□ 0.86
SNRPB-201ENST00000381342 NMRK2Q9NPI5 230 aa20.44■□□□□ 0.86
SNRPB-201ENST00000381342 GLTPD2A6NH11 291 aa20.43■□□□□ 0.86
SNRPB-201ENST00000381342 GRM8O00222 908 aa20.43■□□□□ 0.86
SNRPB-201ENST00000381342 PDE8AO60658 829 aa20.43■□□□□ 0.86
SNRPB-201ENST00000381342 TOMM70O94826 608 aa20.43■□□□□ 0.86
SNRPB-201ENST00000381342 CLUAP1Q96AJ1 413 aa20.43■□□□□ 0.86
SNRPB-201ENST00000381342 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
SNRPB-201ENST00000381342 HOXA10P31260 410 aaPredicted RBP20.42■□□□□ 0.86
SNRPB-201ENST00000381342 CCT4P50991 539 aaKnown RBP20.42■□□□□ 0.86
SNRPB-201ENST00000381342 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNRPB-201ENST00000381342 GRIPAP1Q4V328 841 aa20.42■□□□□ 0.86
SNRPB-201ENST00000381342 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
SNRPB-201ENST00000381342 CRAMP1Q96RY5 1269 aa20.42■□□□□ 0.86
SNRPB-201ENST00000381342 C9orf78Q9NZ63 289 aaPredicted RBP20.42■□□□□ 0.86
SNRPB-201ENST00000381342 LRRC37AA6NMS7 1700 aa20.41■□□□□ 0.86
SNRPB-201ENST00000381342 FER1L6Q2WGJ9 1857 aa20.41■□□□□ 0.86
SNRPB-201ENST00000381342 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
SNRPB-201ENST00000381342 CTSWP56202 376 aa20.41■□□□□ 0.86
SNRPB-201ENST00000381342 CCDC85AQ96PX6 553 aaPredicted RBP20.41■□□□□ 0.86
SNRPB-201ENST00000381342 PRELPP51888 382 aa20.4■□□□□ 0.86
SNRPB-201ENST00000381342 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
SNRPB-201ENST00000381342 SLC51AQ86UW1 340 aa20.4■□□□□ 0.86
SNRPB-201ENST00000381342 UTYO14607 1347 aa20.39■□□□□ 0.85
SNRPB-201ENST00000381342 NBPF7P0C2Y1 421 aaPredicted RBP20.39■□□□□ 0.85
SNRPB-201ENST00000381342 DDX46Q7L014 1031 aaKnown RBP20.39■□□□□ 0.85
SNRPB-201ENST00000381342 CCDC88AQ3V6T2 1871 aa20.39■□□□□ 0.85
SNRPB-201ENST00000381342 PPEF1O14829 653 aaPredicted RBP20.38■□□□□ 0.85
SNRPB-201ENST00000381342 VEGFAP15692 232 aaPredicted RBP20.38■□□□□ 0.85
SNRPB-201ENST00000381342 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
SNRPB-201ENST00000381342 INTS3Q68E01 1043 aaKnown RBP20.38■□□□□ 0.85
SNRPB-201ENST00000381342 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
SNRPB-201ENST00000381342 SUCLG2Q96I99 432 aa20.38■□□□□ 0.85
SNRPB-201ENST00000381342 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
SNRPB-201ENST00000381342 RLBP1P12271 317 aa20.37■□□□□ 0.85
SNRPB-201ENST00000381342 OLFM4Q6UX06 510 aa20.37■□□□□ 0.85
SNRPB-201ENST00000381342 TMEM57Q8N5G2 664 aa20.37■□□□□ 0.85
SNRPB-201ENST00000381342 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
SNRPB-201ENST00000381342 RBM46Q8TBY0 533 aaKnown RBP20.37■□□□□ 0.85
SNRPB-201ENST00000381342 USP44Q9H0E7 712 aa20.37■□□□□ 0.85
SNRPB-201ENST00000381342 ZNF277Q9NRM2 450 aaPredicted RBP20.37■□□□□ 0.85
SNRPB-201ENST00000381342 PLIN1O60240 522 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 BBOX1O75936 387 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 HSPA6P17066 643 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 FOXO4P98177 505 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 GRAPQ13588 217 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 EPHA10Q5JZY3 1008 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 DZIP1LQ8IYY4 767 aaKnown RBP20.36■□□□□ 0.85
SNRPB-201ENST00000381342 GRAPLQ8TC17 118 aaPredicted RBP20.36■□□□□ 0.85
SNRPB-201ENST00000381342 JDP2Q8WYK2 163 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 GREM2Q9H772 168 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 SEC31BQ9NQW1 1179 aa20.36■□□□□ 0.85
SNRPB-201ENST00000381342 RTL9Q8NET4 1388 aa20.35■□□□□ 0.85
SNRPB-201ENST00000381342 IARSP41252 1262 aaKnown RBP20.35■□□□□ 0.85
SNRPB-201ENST00000381342 FAM161AQ3B820 660 aa20.35■□□□□ 0.85
SNRPB-201ENST00000381342 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
SNRPB-201ENST00000381342 KAZALD1Q96I82 304 aa20.35■□□□□ 0.85
SNRPB-201ENST00000381342 PSMD1Q99460 953 aa20.35■□□□□ 0.85
SNRPB-201ENST00000381342 MEIS3Q99687 375 aa20.35■□□□□ 0.85
SNRPB-201ENST00000381342 A0A1B0GUL6 1792 aa20.34■□□□□ 0.85
SNRPB-201ENST00000381342 TIAM2Q8IVF5 1701 aa20.34■□□□□ 0.85
SNRPB-201ENST00000381342 SNED1Q8TER0 1413 aa20.34■□□□□ 0.85
SNRPB-201ENST00000381342 LTBP1Q14766 1721 aa20.33■□□□□ 0.85
SNRPB-201ENST00000381342 UBTFL1P0CB47 393 aaPredicted RBP20.33■□□□□ 0.85
SNRPB-201ENST00000381342 FSTL1Q12841 308 aa20.33■□□□□ 0.85
SNRPB-201ENST00000381342 PANK1Q8TE04 598 aa20.33■□□□□ 0.85
SNRPB-201ENST00000381342 BICC1Q9H694 974 aaKnown RBP20.33■□□□□ 0.85
SNRPB-201ENST00000381342 CHMP3Q9Y3E7 222 aa20.33■□□□□ 0.85
SNRPB-201ENST00000381342 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
SNRPB-201ENST00000381342 CSF1RP07333 972 aa20.32■□□□□ 0.84
SNRPB-201ENST00000381342 LMBR1LQ6UX01 489 aa20.32■□□□□ 0.84
SNRPB-201ENST00000381342 TMC4Q7Z404 712 aa20.32■□□□□ 0.84
SNRPB-201ENST00000381342 ITPRIPQ8IWB1 547 aa20.32■□□□□ 0.84
SNRPB-201ENST00000381342 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
SNRPB-201ENST00000381342 ATP6V0A2Q9Y487 856 aa20.32■□□□□ 0.84
SNRPB-201ENST00000381342 DUOX1Q9NRD9 1551 aa20.31■□□□□ 0.84
SNRPB-201ENST00000381342 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
SNRPB-201ENST00000381342 ITGA6P23229 1130 aa20.31■□□□□ 0.84
SNRPB-201ENST00000381342 EIF6P56537 245 aaKnown RBP20.31■□□□□ 0.84
SNRPB-201ENST00000381342 SP8Q8IXZ3 490 aa20.31■□□□□ 0.84
SNRPB-201ENST00000381342 LARGE2Q8N3Y3 721 aa20.31■□□□□ 0.84
SNRPB-201ENST00000381342 ANKRD44Q8N8A2 993 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms