RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 HSP90B1P14625 803 aaKnown RBP16.82■□□□□ 0.28
RPAIN-202ENST00000381208 TRIM28Q13263 835 aaKnown RBP16.82■□□□□ 0.28
RPAIN-202ENST00000381208 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
RPAIN-202ENST00000381208 CREBZFQ9NS37 354 aa16.82■□□□□ 0.28
RPAIN-202ENST00000381208 EPHX2P34913 555 aa16.81■□□□□ 0.28
RPAIN-202ENST00000381208 C3orf67Q6ZVT6 689 aa16.81■□□□□ 0.28
RPAIN-202ENST00000381208 SP8Q8IXZ3 490 aa16.81■□□□□ 0.28
RPAIN-202ENST00000381208 NIM1KQ8IY84 436 aa16.81■□□□□ 0.28
RPAIN-202ENST00000381208 ISCA1Q9BUE6 129 aa16.81■□□□□ 0.28
RPAIN-202ENST00000381208 ABCC4O15439 1325 aa16.81■□□□□ 0.28
RPAIN-202ENST00000381208 HCLS1P14317 486 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-202ENST00000381208 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-202ENST00000381208 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
RPAIN-202ENST00000381208 GRAPQ13588 217 aa16.8■□□□□ 0.28
RPAIN-202ENST00000381208 GRAPLQ8TC17 118 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-202ENST00000381208 RTFDC1Q9BY42 306 aaPredicted RBP16.8■□□□□ 0.28
RPAIN-202ENST00000381208 PPIP5K2O43314 1243 aa16.79■□□□□ 0.28
RPAIN-202ENST00000381208 ANKRD36CQ5JPF3 1778 aa16.78■□□□□ 0.28
RPAIN-202ENST00000381208 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
RPAIN-202ENST00000381208 EAPPQ56P03 285 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-202ENST00000381208 DPP8Q6V1X1 898 aaPredicted RBP16.78■□□□□ 0.28
RPAIN-202ENST00000381208 MPNDQ8N594 471 aa16.78■□□□□ 0.28
RPAIN-202ENST00000381208 CLEC11AQ9Y240 323 aa16.78■□□□□ 0.28
RPAIN-202ENST00000381208 PASKQ96RG2 1323 aa16.77■□□□□ 0.28
RPAIN-202ENST00000381208 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
RPAIN-202ENST00000381208 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
RPAIN-202ENST00000381208 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
RPAIN-202ENST00000381208 CCDC27Q2M243 656 aa16.77■□□□□ 0.28
RPAIN-202ENST00000381208 CCDC30Q5VVM6 783 aa16.77■□□□□ 0.28
RPAIN-202ENST00000381208 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
RPAIN-202ENST00000381208 GJA3Q9Y6H8 435 aa16.77■□□□□ 0.28
RPAIN-202ENST00000381208 DDX58O95786 925 aaKnown RBP16.77■□□□□ 0.27
RPAIN-202ENST00000381208 ZNRF3Q9ULT6 936 aa16.77■□□□□ 0.27
RPAIN-202ENST00000381208 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
RPAIN-202ENST00000381208 ATP5J2-PTCD1G3V325 749 aa16.75■□□□□ 0.27
RPAIN-202ENST00000381208 ITGBL1O95965 494 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-202ENST00000381208 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
RPAIN-202ENST00000381208 AOC3Q16853 763 aa16.75■□□□□ 0.27
RPAIN-202ENST00000381208 USP50Q70EL3 339 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-202ENST00000381208 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
RPAIN-202ENST00000381208 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
RPAIN-202ENST00000381208 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
RPAIN-202ENST00000381208 CDHR2Q9BYE9 1310 aa16.74■□□□□ 0.27
RPAIN-202ENST00000381208 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
RPAIN-202ENST00000381208 CNTROBQ8N137 903 aa16.74■□□□□ 0.27
RPAIN-202ENST00000381208 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
RPAIN-202ENST00000381208 SCNN1DP51172 638 aa16.73■□□□□ 0.27
RPAIN-202ENST00000381208 TNIP1Q15025 636 aa16.73■□□□□ 0.27
RPAIN-202ENST00000381208 IL16Q14005 1332 aa16.72■□□□□ 0.27
RPAIN-202ENST00000381208 ANP32CO43423 234 aa16.72■□□□□ 0.27
RPAIN-202ENST00000381208 CIAPIN1Q6FI81 312 aa16.72■□□□□ 0.27
RPAIN-202ENST00000381208 C8orf58Q8NAV2 365 aa16.72■□□□□ 0.27
RPAIN-202ENST00000381208 STK31Q9BXU1 1019 aa16.72■□□□□ 0.27
RPAIN-202ENST00000381208 COL4A5P29400 1685 aa16.71■□□□□ 0.27
RPAIN-202ENST00000381208 CXCL9Q07325 125 aa16.71■□□□□ 0.27
RPAIN-202ENST00000381208 METTL22Q9BUU2 404 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-202ENST00000381208 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
RPAIN-202ENST00000381208 ADARB2Q9NS39 739 aaKnown RBP16.71■□□□□ 0.27
RPAIN-202ENST00000381208 CWC25Q9NXE8 425 aaPredicted RBP16.71■□□□□ 0.27
RPAIN-202ENST00000381208 GPRC5DQ9NZD1 345 aa16.71■□□□□ 0.27
RPAIN-202ENST00000381208 CNTNAP1P78357 1384 aa16.71■□□□□ 0.27
RPAIN-202ENST00000381208 PCCAP05165 728 aaPredicted RBP16.7■□□□□ 0.26
RPAIN-202ENST00000381208 EPS15P42566 896 aa16.7■□□□□ 0.26
RPAIN-202ENST00000381208 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
RPAIN-202ENST00000381208 MAP1SQ66K74 1059 aaPredicted RBP16.7■□□□□ 0.26
RPAIN-202ENST00000381208 WWC1Q8IX03 1113 aa16.7■□□□□ 0.26
RPAIN-202ENST00000381208 EYA3Q99504 573 aa16.7■□□□□ 0.26
RPAIN-202ENST00000381208 MYD88Q99836 296 aa16.7■□□□□ 0.26
RPAIN-202ENST00000381208 PLSCR2Q9NRY7 297 aa16.7■□□□□ 0.26
RPAIN-202ENST00000381208 MKRN1Q9UHC7 482 aaKnown RBP16.7■□□□□ 0.26
RPAIN-202ENST00000381208 ADAMTSL1Q8N6G6 1762 aa16.7■□□□□ 0.26
RPAIN-202ENST00000381208 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
RPAIN-202ENST00000381208 HSPA1AP0DMV8 641 aaKnown RBP16.69■□□□□ 0.26
RPAIN-202ENST00000381208 HSPA1BP0DMV9 641 aaKnown RBP16.69■□□□□ 0.26
RPAIN-202ENST00000381208 WASHC4Q2M389 1173 aa16.69■□□□□ 0.26
RPAIN-202ENST00000381208 CCDC152Q4G0S7 254 aa16.69■□□□□ 0.26
RPAIN-202ENST00000381208 CELF1Q92879 486 aaKnown RBP16.69■□□□□ 0.26
RPAIN-202ENST00000381208 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
RPAIN-202ENST00000381208 LAMB2P55268 1798 aa16.69■□□□□ 0.26
RPAIN-202ENST00000381208 PDE8AO60658 829 aa16.68■□□□□ 0.26
RPAIN-202ENST00000381208 NEXNQ0ZGT2 675 aa16.68■□□□□ 0.26
RPAIN-202ENST00000381208 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
RPAIN-202ENST00000381208 KSR2Q6VAB6 950 aa16.68■□□□□ 0.26
RPAIN-202ENST00000381208 SLC51AQ86UW1 340 aa16.68■□□□□ 0.26
RPAIN-202ENST00000381208 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
RPAIN-202ENST00000381208 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
RPAIN-202ENST00000381208 PCNTO95613 3336 aa16.68■□□□□ 0.26
RPAIN-202ENST00000381208 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
RPAIN-202ENST00000381208 RASSF10A6NK89 507 aa16.66■□□□□ 0.26
RPAIN-202ENST00000381208 C6orf229H3BNL8 230 aa16.66■□□□□ 0.26
RPAIN-202ENST00000381208 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
RPAIN-202ENST00000381208 TWISTNBQ3B726 338 aaPredicted RBP16.66■□□□□ 0.26
RPAIN-202ENST00000381208 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
RPAIN-202ENST00000381208 PODXL2Q9NZ53 605 aa16.66■□□□□ 0.26
RPAIN-202ENST00000381208 MAP3K2Q9Y2U5 619 aa16.66■□□□□ 0.26
RPAIN-202ENST00000381208 DDX60Q8IY21 1712 aaKnown RBP16.66■□□□□ 0.26
RPAIN-202ENST00000381208 H7C1D1 291 aa16.65■□□□□ 0.26
RPAIN-202ENST00000381208 RAD17O75943 681 aa16.65■□□□□ 0.26
RPAIN-202ENST00000381208 DEFB115Q30KQ5 88 aa16.65■□□□□ 0.26
RPAIN-202ENST00000381208 WDR63Q8IWG1 891 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms