RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 CHMP4BQ9H444 224 aaKnown RBP13.99□□□□□ -0.17
PITRM1-202ENST00000380989 BICC1Q9H694 974 aaKnown RBP13.99□□□□□ -0.17
PITRM1-202ENST00000380989 PALD1Q9ULE6 856 aa13.99□□□□□ -0.17
PITRM1-202ENST00000380989 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
PITRM1-202ENST00000380989 A0A087WZG4 1122 aa13.99□□□□□ -0.17
PITRM1-202ENST00000380989 CCDC85AQ96PX6 553 aaPredicted RBP13.99□□□□□ -0.17
PITRM1-202ENST00000380989 ISY1Q9ULR0 285 aaKnown RBP13.99□□□□□ -0.17
PITRM1-202ENST00000380989 BTAF1O14981 1849 aa13.98□□□□□ -0.17
PITRM1-202ENST00000380989 NEK4P51957 841 aa13.98□□□□□ -0.17
PITRM1-202ENST00000380989 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
PITRM1-202ENST00000380989 PDLIM2Q96JY6 352 aa13.98□□□□□ -0.17
PITRM1-202ENST00000380989 USP25Q9UHP3 1055 aa13.98□□□□□ -0.17
PITRM1-202ENST00000380989 CYP2E1P05181 493 aaPredicted RBP13.98□□□□□ -0.17
PITRM1-202ENST00000380989 TEX13AQ9BXU3 409 aaPredicted RBP13.98□□□□□ -0.17
PITRM1-202ENST00000380989 DCTPP1Q9H773 170 aa13.98□□□□□ -0.17
PITRM1-202ENST00000380989 ATP8B2P98198 1209 aa13.97□□□□□ -0.17
PITRM1-202ENST00000380989 DZIP3Q86Y13 1208 aaKnown RBP13.97□□□□□ -0.17
PITRM1-202ENST00000380989 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
PITRM1-202ENST00000380989 ALDH1L1O75891 902 aa13.97□□□□□ -0.17
PITRM1-202ENST00000380989 AFDNP55196 1824 aaKnown RBP13.97□□□□□ -0.17
PITRM1-202ENST00000380989 RBM6P78332 1123 aaKnown RBP13.96□□□□□ -0.17
PITRM1-202ENST00000380989 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.17
PITRM1-202ENST00000380989 FBXO41Q8TF61 875 aa13.96□□□□□ -0.17
PITRM1-202ENST00000380989 FAM89AQ96GI7 184 aa13.96□□□□□ -0.17
PITRM1-202ENST00000380989 LRRC4BQ9NT99 713 aa13.96□□□□□ -0.17
PITRM1-202ENST00000380989 CCNL1Q9UK58 526 aaPredicted RBP13.96□□□□□ -0.17
PITRM1-202ENST00000380989 ZNF772Q68DY9 489 aaPredicted RBP13.96□□□□□ -0.17
PITRM1-202ENST00000380989 KIF6Q6ZMV9 814 aa13.96□□□□□ -0.17
PITRM1-202ENST00000380989 IL1RAPL2Q9NP60 686 aa13.96□□□□□ -0.17
PITRM1-202ENST00000380989 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.18
PITRM1-202ENST00000380989 SIL1Q9H173 461 aa13.96□□□□□ -0.18
PITRM1-202ENST00000380989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.96□□□□□ -0.18
PITRM1-202ENST00000380989 PHF14O94880 888 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 ATP2B3Q16720 1220 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 TTC22Q5TAA0 569 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
PITRM1-202ENST00000380989 SBF2Q86WG5 1849 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 SURF6O75683 361 aaKnown RBP13.95□□□□□ -0.18
PITRM1-202ENST00000380989 MAP4K4O95819 1239 aaPredicted RBP13.95□□□□□ -0.18
PITRM1-202ENST00000380989 RXRBP28702 533 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 LRSAM1Q6UWE0 723 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 SMARCC1Q92922 1105 aaPredicted RBP13.95□□□□□ -0.18
PITRM1-202ENST00000380989 IL25Q9H293 177 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 SRCAPQ6ZRS2 3230 aa13.95□□□□□ -0.18
PITRM1-202ENST00000380989 NUP188Q5SRE5 1749 aa13.94□□□□□ -0.18
PITRM1-202ENST00000380989 TCHHQ07283 1943 aa13.94□□□□□ -0.18
PITRM1-202ENST00000380989 EIF5P55010 431 aaKnown RBP13.94□□□□□ -0.18
PITRM1-202ENST00000380989 GCC1Q96CN9 775 aa13.94□□□□□ -0.18
PITRM1-202ENST00000380989 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
PITRM1-202ENST00000380989 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.94□□□□□ -0.18
PITRM1-202ENST00000380989 RABEP1Q15276 862 aa13.94□□□□□ -0.18
PITRM1-202ENST00000380989 TMX3Q96JJ7 454 aa13.94□□□□□ -0.18
PITRM1-202ENST00000380989 IL6STP40189 918 aaPredicted RBP13.93□□□□□ -0.18
PITRM1-202ENST00000380989 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
PITRM1-202ENST00000380989 CWC25Q9NXE8 425 aaPredicted RBP13.93□□□□□ -0.18
PITRM1-202ENST00000380989 SRP68Q9UHB9 627 aaKnown RBP13.93□□□□□ -0.18
PITRM1-202ENST00000380989 GNPATO15228 680 aa13.93□□□□□ -0.18
PITRM1-202ENST00000380989 BICDL1Q6ZP65 573 aa13.93□□□□□ -0.18
PITRM1-202ENST00000380989 HCLS1P14317 486 aaPredicted RBP13.92□□□□□ -0.18
PITRM1-202ENST00000380989 MAPK8IP2Q13387 824 aaPredicted RBP13.92□□□□□ -0.18
PITRM1-202ENST00000380989 NHSQ6T4R5 1651 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 UBN2Q6ZU65 1347 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 HMMRO75330 724 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 CASP7P55210 303 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 NUCB2P80303 420 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 GIGYF2Q6Y7W6 1299 aaKnown RBP13.92□□□□□ -0.18
PITRM1-202ENST00000380989 SPC24Q8NBT2 197 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 SSH3Q8TE77 659 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 UTRNP46939 3433 aa13.92□□□□□ -0.18
PITRM1-202ENST00000380989 LMBR1LQ6UX01 489 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 FAM196AQ6ZSG2 479 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 CCDC24Q8N4L8 307 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 CPA1P15085 419 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 ISCA1Q9BUE6 129 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 UTYO14607 1347 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 ZBTB22O15209 634 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 POLA2Q14181 598 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 NUTM1Q86Y26 1132 aa13.91□□□□□ -0.18
PITRM1-202ENST00000380989 ZNF594Q96JF6 807 aaPredicted RBP13.91□□□□□ -0.18
PITRM1-202ENST00000380989 ZSCAN20P17040 1043 aaPredicted RBP13.9□□□□□ -0.18
PITRM1-202ENST00000380989 NAA30Q147X3 362 aaPredicted RBP13.9□□□□□ -0.18
PITRM1-202ENST00000380989 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 RILPL2Q969X0 211 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 COL15A1P39059 1388 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 H7C1W4 665 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 CAMTA2O94983 1202 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 NLRP10Q86W26 655 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 PROM2Q8N271 834 aa13.9□□□□□ -0.18
PITRM1-202ENST00000380989 AP5Z1O43299 807 aa13.89□□□□□ -0.19
PITRM1-202ENST00000380989 FOXO4P98177 505 aa13.89□□□□□ -0.19
PITRM1-202ENST00000380989 OS9Q13438 667 aaPredicted RBP13.89□□□□□ -0.19
PITRM1-202ENST00000380989 SASS6Q6UVJ0 657 aa13.89□□□□□ -0.19
PITRM1-202ENST00000380989 ST18O60284 1047 aa13.89□□□□□ -0.19
PITRM1-202ENST00000380989 CCDC191Q8NCU4 936 aa13.89□□□□□ -0.19
PITRM1-202ENST00000380989 ANO2Q9NQ90 1003 aa13.89□□□□□ -0.19
PITRM1-202ENST00000380989 COL5A3P25940 1745 aaPredicted RBP13.89□□□□□ -0.19
PITRM1-202ENST00000380989 U2AF2P26368 475 aaKnown RBP eCLIP13.88□□□□□ -0.19
PITRM1-202ENST00000380989 SUSD4Q5VX71 490 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms