RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 RPGRIP1LQ68CZ1 1315 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 ZYXQ15942 572 aaKnown RBP14.19□□□□□ -0.14
CHD3-203ENST00000380358 CGNQ9P2M7 1197 aaKnown RBP14.19□□□□□ -0.14
CHD3-203ENST00000380358 PDE4BQ07343 736 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 MFSD6Q6ZSS7 791 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 GPIHBP1Q8IV16 184 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 HSF2BPO75031 334 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 KIF4AO95239 1232 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 BAG3O95817 575 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 CUL4BQ13620 913 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 CCDC155Q8N6L0 562 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 BANK1Q8NDB2 785 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 USP25Q9UHP3 1055 aa14.19□□□□□ -0.14
CHD3-203ENST00000380358 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.18□□□□□ -0.14
CHD3-203ENST00000380358 CCDC12Q8WUD4 166 aaPredicted RBP14.18□□□□□ -0.14
CHD3-203ENST00000380358 PPP1R9BQ96SB3 815 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 ANXA1P04083 346 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 DIXDC1Q155Q3 683 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 KCNK9Q9NPC2 374 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 BACH1O14867 736 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 KRT5P13647 590 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 RRAGBQ5VZM2 374 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 MAK16Q9BXY0 300 aaKnown RBP14.18□□□□□ -0.14
CHD3-203ENST00000380358 SORBS3O60504 671 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 CFAP157Q5JU67 520 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 KIF5BP33176 963 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 METAP2P50579 478 aaKnown RBP eCLIP14.18□□□□□ -0.14
CHD3-203ENST00000380358 MICALCLQ6ZW33 695 aa14.18□□□□□ -0.14
CHD3-203ENST00000380358 BEGAINQ9BUH8 593 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 STAT6P42226 847 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 SPAG5Q96R06 1193 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 CEP135Q66GS9 1140 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 IMPG2Q9BZV3 1241 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 MAP3K2Q9Y2U5 619 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 CEP83Q9Y592 693 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 KIF1BPQ96EK5 621 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 AFG3L2Q9Y4W6 797 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 LRRC43Q8N309 656 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 TRIM6Q9C030 488 aaPredicted RBP14.17□□□□□ -0.14
CHD3-203ENST00000380358 HDAC9Q9UKV0 1011 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 ABL1P00519 1130 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 MX1P20591 662 aa14.17□□□□□ -0.14
CHD3-203ENST00000380358 RBM27Q9P2N5 1060 aaKnown RBP14.17□□□□□ -0.14
CHD3-203ENST00000380358 AKR1B10O60218 316 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 KMT5BQ4FZB7 885 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 IARSP41252 1262 aaKnown RBP14.16□□□□□ -0.14
CHD3-203ENST00000380358 CCDC88BA6NC98 1476 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 ARHGAP5Q13017 1502 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 C4orf50Q6ZRC1 276 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 PHAXQ9H814 394 aaKnown RBP14.16□□□□□ -0.14
CHD3-203ENST00000380358 TLDC2A0PJX2 215 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 N4BP3O15049 544 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 IFIT1BQ5T764 474 aaKnown RBP14.16□□□□□ -0.14
CHD3-203ENST00000380358 ZNF830Q96NB3 372 aaPredicted RBP14.16□□□□□ -0.14
CHD3-203ENST00000380358 MVPQ14764 893 aaKnown RBP14.16□□□□□ -0.14
CHD3-203ENST00000380358 CWC25Q9NXE8 425 aaPredicted RBP14.16□□□□□ -0.14
CHD3-203ENST00000380358 GJB2P29033 226 aa14.16□□□□□ -0.14
CHD3-203ENST00000380358 TTC30BQ8N4P2 665 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 KIFC2Q96AC6 838 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 ZHX1Q9UKY1 873 aaPredicted RBP14.15□□□□□ -0.14
CHD3-203ENST00000380358 KSR1Q8IVT5 923 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 ATRIPQ8WXE1 791 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 CYP7A1P22680 504 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 PRPF31Q8WWY3 499 aaKnown RBP14.15□□□□□ -0.14
CHD3-203ENST00000380358 RNF41Q9H4P4 317 aaPredicted RBP14.15□□□□□ -0.14
CHD3-203ENST00000380358 CHMP2AO43633 222 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 GTF3C6Q969F1 213 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
CHD3-203ENST00000380358 RAPGEF3O95398 923 aa14.15□□□□□ -0.15
CHD3-203ENST00000380358 ATP6V1AP38606 617 aa14.15□□□□□ -0.15
CHD3-203ENST00000380358 CKAP4Q07065 602 aaKnown RBP14.15□□□□□ -0.15
CHD3-203ENST00000380358 SAP30BPQ9UHR5 308 aaKnown RBP14.15□□□□□ -0.15
CHD3-203ENST00000380358 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 TCEANC2Q96MN5 208 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 AKNAQ7Z591 1439 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 MARCKSP29966 332 aaPredicted RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 SMC6Q96SB8 1091 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 DAPK3O43293 454 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 LMOD1P29536 600 aaPredicted RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 GNG11P61952 73 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 DCAF17Q5H9S7 520 aaPredicted RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 TFCP2L1Q9NZI6 479 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 GMNNO75496 209 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 NAPAP54920 295 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 RNASE9P60153 205 aaKnown RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 EAPPQ56P03 285 aaPredicted RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 AGTPBP1Q9UPW5 1226 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 DDX39AO00148 427 aaKnown RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 NOL3O60936 208 aaKnown RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 MNAT1P51948 309 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 IFT81Q8WYA0 676 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 DACT3Q96B18 629 aaPredicted RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 CDC5LQ99459 802 aaKnown RBP14.14□□□□□ -0.15
CHD3-203ENST00000380358 SLC4A4Q9Y6R1 1079 aa14.14□□□□□ -0.15
CHD3-203ENST00000380358 CLGNO14967 610 aa14.13□□□□□ -0.15
CHD3-203ENST00000380358 HSPA1LP34931 641 aa14.13□□□□□ -0.15
CHD3-203ENST00000380358 EIF6P56537 245 aaKnown RBP14.13□□□□□ -0.15
CHD3-203ENST00000380358 RSPH3Q86UC2 560 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms