RNA–Protein interactions for RNA: ENST00000378362.3

GFRA3-202, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GFRA3, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-202ENST00000378362 ZNF784Q8NCA9 323 aaPredicted RBP27.81■■■□□ 2.04
GFRA3-202ENST00000378362 CASP7P55210 303 aa27.8■■■□□ 2.04
GFRA3-202ENST00000378362 PTPRCP08575 1304 aa27.8■■■□□ 2.04
GFRA3-202ENST00000378362 CCDC93Q567U6 631 aa27.79■■■□□ 2.04
GFRA3-202ENST00000378362 SRCIN1Q9C0H9 1055 aa27.79■■■□□ 2.04
GFRA3-202ENST00000378362 TNNQ9UQP3 1299 aa27.79■■■□□ 2.04
GFRA3-202ENST00000378362 TAOK3Q9H2K8 898 aa27.78■■■□□ 2.04
GFRA3-202ENST00000378362 ZNF277Q9NRM2 450 aaPredicted RBP27.78■■■□□ 2.04
GFRA3-202ENST00000378362 CDHR2Q9BYE9 1310 aa27.78■■■□□ 2.04
GFRA3-202ENST00000378362 GRAPQ13588 217 aa27.78■■■□□ 2.04
GFRA3-202ENST00000378362 GRAPLQ8TC17 118 aaPredicted RBP27.78■■■□□ 2.04
GFRA3-202ENST00000378362 FRAT1Q92837 279 aaPredicted RBP27.78■■■□□ 2.04
GFRA3-202ENST00000378362 CTSWP56202 376 aa27.77■■■□□ 2.04
GFRA3-202ENST00000378362 LMNB1P20700 586 aa27.76■■■□□ 2.04
GFRA3-202ENST00000378362 TTLL11Q8NHH1 800 aa27.76■■■□□ 2.04
GFRA3-202ENST00000378362 GREM2Q9H772 168 aa27.76■■■□□ 2.04
GFRA3-202ENST00000378362 C9orf78Q9NZ63 289 aaPredicted RBP27.76■■■□□ 2.04
GFRA3-202ENST00000378362 GRM8O00222 908 aa27.75■■■□□ 2.03
GFRA3-202ENST00000378362 NBPF7P0C2Y1 421 aaPredicted RBP27.75■■■□□ 2.03
GFRA3-202ENST00000378362 CCDC152Q4G0S7 254 aa27.75■■■□□ 2.03
GFRA3-202ENST00000378362 EPHA10Q5JZY3 1008 aa27.75■■■□□ 2.03
GFRA3-202ENST00000378362 ATP6V0A2Q9Y487 856 aa27.75■■■□□ 2.03
GFRA3-202ENST00000378362 BBOX1O75936 387 aa27.74■■■□□ 2.03
GFRA3-202ENST00000378362 SOGA3Q5TF21 947 aa27.74■■■□□ 2.03
GFRA3-202ENST00000378362 MYH3P11055 1940 aa27.73■■■□□ 2.03
GFRA3-202ENST00000378362 ALDH1L1O75891 902 aa27.72■■■□□ 2.03
GFRA3-202ENST00000378362 RPS8P62241 208 aaKnown RBP27.72■■■□□ 2.03
GFRA3-202ENST00000378362 FKBP4Q02790 459 aaKnown RBP eCLIP27.72■■■□□ 2.03
GFRA3-202ENST00000378362 RTKN2Q8IZC4 609 aa27.72■■■□□ 2.03
GFRA3-202ENST00000378362 HSP90B1P14625 803 aaKnown RBP27.71■■■□□ 2.03
GFRA3-202ENST00000378362 CLUAP1Q96AJ1 413 aa27.71■■■□□ 2.03
GFRA3-202ENST00000378362 SNED1Q8TER0 1413 aa27.71■■■□□ 2.03
GFRA3-202ENST00000378362 BRPF1P55201 1214 aaPredicted RBP27.71■■■□□ 2.03
GFRA3-202ENST00000378362 FAM161AQ3B820 660 aa27.71■■■□□ 2.03
GFRA3-202ENST00000378362 CHMP3Q9Y3E7 222 aa27.71■■■□□ 2.03
GFRA3-202ENST00000378362 FOXO4P98177 505 aa27.7■■■□□ 2.02
GFRA3-202ENST00000378362 SP8Q8IXZ3 490 aa27.7■■■□□ 2.02
GFRA3-202ENST00000378362 SUCLG2Q96I99 432 aa27.69■■■□□ 2.02
GFRA3-202ENST00000378362 KAZALD1Q96I82 304 aa27.68■■■□□ 2.02
GFRA3-202ENST00000378362 PLA2G12BQ9BX93 195 aa27.68■■■□□ 2.02
GFRA3-202ENST00000378362 USP44Q9H0E7 712 aa27.68■■■□□ 2.02
GFRA3-202ENST00000378362 TMX4Q9H1E5 349 aaPredicted RBP27.68■■■□□ 2.02
GFRA3-202ENST00000378362 LTBP3Q9NS15 1303 aa27.68■■■□□ 2.02
GFRA3-202ENST00000378362 TRIM27P14373 513 aa27.67■■■□□ 2.02
GFRA3-202ENST00000378362 LMBR1LQ6UX01 489 aa27.67■■■□□ 2.02
GFRA3-202ENST00000378362 GPR101Q96P66 508 aaPredicted RBP27.67■■■□□ 2.02
GFRA3-202ENST00000378362 API5Q9BZZ5 524 aaKnown RBP27.67■■■□□ 2.02
GFRA3-202ENST00000378362 NSFL1CQ9UNZ2 370 aaKnown RBP27.67■■■□□ 2.02
GFRA3-202ENST00000378362 KIF16BQ96L93 1317 aa27.67■■■□□ 2.02
GFRA3-202ENST00000378362 ITGA6P23229 1130 aa27.67■■■□□ 2.02
GFRA3-202ENST00000378362 DPP8Q6V1X1 898 aaPredicted RBP27.67■■■□□ 2.02
GFRA3-202ENST00000378362 MPNDQ8N594 471 aa27.67■■■□□ 2.02
GFRA3-202ENST00000378362 SPEF2Q9C093 1822 aa27.66■■■□□ 2.02
GFRA3-202ENST00000378362 CSF1RP07333 972 aa27.66■■■□□ 2.02
GFRA3-202ENST00000378362 GPSM2P81274 684 aa27.66■■■□□ 2.02
GFRA3-202ENST00000378362 CC2D2BQ6DHV5 1058 aa27.66■■■□□ 2.02
GFRA3-202ENST00000378362 WTIPA6NIX2 430 aaPredicted RBP27.65■■■□□ 2.02
GFRA3-202ENST00000378362 ANKRD18AQ8IVF6 992 aa27.65■■■□□ 2.02
GFRA3-202ENST00000378362 PSMD1Q99460 953 aa27.65■■■□□ 2.02
GFRA3-202ENST00000378362 IARSP41252 1262 aaKnown RBP27.64■■■□□ 2.02
GFRA3-202ENST00000378362 AOC3Q16853 763 aa27.64■■■□□ 2.01
GFRA3-202ENST00000378362 ATF7IPQ6VMQ6 1270 aa27.64■■■□□ 2.01
GFRA3-202ENST00000378362 ZNF594Q96JF6 807 aaPredicted RBP27.64■■■□□ 2.01
GFRA3-202ENST00000378362 GPBP1L1Q9HC44 474 aaPredicted RBP27.64■■■□□ 2.01
GFRA3-202ENST00000378362 DICER1Q9UPY3 1922 aaKnown RBP27.63■■■□□ 2.01
GFRA3-202ENST00000378362 COL4A5P29400 1685 aa27.63■■■□□ 2.01
GFRA3-202ENST00000378362 BICC1Q9H694 974 aaKnown RBP27.63■■■□□ 2.01
GFRA3-202ENST00000378362 TIAM2Q8IVF5 1701 aa27.63■■■□□ 2.01
GFRA3-202ENST00000378362 CCT4P50991 539 aaKnown RBP27.62■■■□□ 2.01
GFRA3-202ENST00000378362 ARHGAP45Q92619 1136 aa27.62■■■□□ 2.01
GFRA3-202ENST00000378362 CDC5LQ99459 802 aaKnown RBP27.62■■■□□ 2.01
GFRA3-202ENST00000378362 NMRK2Q9NPI5 230 aa27.62■■■□□ 2.01
GFRA3-202ENST00000378362 POLLQ9UGP5 575 aa27.62■■■□□ 2.01
GFRA3-202ENST00000378362 UTYO14607 1347 aa27.61■■■□□ 2.01
GFRA3-202ENST00000378362 IPO8O15397 1037 aaKnown RBP27.61■■■□□ 2.01
GFRA3-202ENST00000378362 LARGE2Q8N3Y3 721 aa27.61■■■□□ 2.01
GFRA3-202ENST00000378362 ANKIB1Q9P2G1 1089 aa27.61■■■□□ 2.01
GFRA3-202ENST00000378362 RIMBP2O15034 1052 aa27.6■■■□□ 2.01
GFRA3-202ENST00000378362 PPIP5K2O43314 1243 aa27.6■■■□□ 2.01
GFRA3-202ENST00000378362 C6orf229H3BNL8 230 aa27.6■■■□□ 2.01
GFRA3-202ENST00000378362 ZKSCAN2Q63HK3 967 aa27.6■■■□□ 2.01
GFRA3-202ENST00000378362 MEIS3Q99687 375 aa27.6■■■□□ 2.01
GFRA3-202ENST00000378362 TMC4Q7Z404 712 aa27.59■■■□□ 2.01
GFRA3-202ENST00000378362 DUOX1Q9NRD9 1551 aa27.58■■■□□ 2.01
GFRA3-202ENST00000378362 ANKRD18BA2A2Z9 1011 aa27.58■■■□□ 2.01
GFRA3-202ENST00000378362 IFIT5Q13325 482 aaKnown RBP27.58■■■□□ 2.01
GFRA3-202ENST00000378362 ANKRD44Q8N8A2 993 aa27.58■■■□□ 2.01
GFRA3-202ENST00000378362 MINPP1Q9UNW1 487 aa27.58■■■□□ 2.01
GFRA3-202ENST00000378362 LRRC37AA6NMS7 1700 aa27.58■■■□□ 2.01
GFRA3-202ENST00000378362 ZNF541Q9H0D2 1346 aa27.58■■■□□ 2.01
GFRA3-202ENST00000378362 PLIN1O60240 522 aa27.57■■■□□ 2
GFRA3-202ENST00000378362 DDNO94850 711 aaPredicted RBP27.57■■■□□ 2
GFRA3-202ENST00000378362 IGHMBP2P38935 993 aaKnown RBP27.57■■■□□ 2
GFRA3-202ENST00000378362 TMEM57Q8N5G2 664 aa27.57■■■□□ 2
GFRA3-202ENST00000378362 RTFDC1Q9BY42 306 aaPredicted RBP27.57■■■□□ 2
GFRA3-202ENST00000378362 BSDC1Q9NW68 430 aaPredicted RBP27.57■■■□□ 2
GFRA3-202ENST00000378362 RTL9Q8NET4 1388 aa27.57■■■□□ 2
GFRA3-202ENST00000378362 RLBP1P12271 317 aa27.57■■■□□ 2
GFRA3-202ENST00000378362 INTS3Q68E01 1043 aaKnown RBP27.56■■■□□ 2
GFRA3-202ENST00000378362 TBC1D16Q8TBP0 767 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms