RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 DUSP27Q5VZP5 1158 aa23.99■■□□□ 1.43
HDAC6-202ENST00000376610 ABT1Q9ULW3 272 aaKnown RBP23.99■■□□□ 1.43
HDAC6-202ENST00000376610 LTBP1Q14766 1721 aa23.98■■□□□ 1.43
HDAC6-202ENST00000376610 VEGFBP49765 207 aa23.98■■□□□ 1.43
HDAC6-202ENST00000376610 KIAA2012Q0VF49 1180 aa23.97■■□□□ 1.43
HDAC6-202ENST00000376610 DEFB115Q30KQ5 88 aa23.97■■□□□ 1.43
HDAC6-202ENST00000376610 MBIPQ9NS73 344 aa23.97■■□□□ 1.43
HDAC6-202ENST00000376610 CAPN15O75808 1086 aa23.96■■□□□ 1.43
HDAC6-202ENST00000376610 GNAI1P63096 354 aa23.96■■□□□ 1.43
HDAC6-202ENST00000376610 ZNF428Q96B54 188 aa23.96■■□□□ 1.43
HDAC6-202ENST00000376610 ISCA1Q9BUE6 129 aa23.96■■□□□ 1.43
HDAC6-202ENST00000376610 ADARB2Q9NS39 739 aaKnown RBP23.96■■□□□ 1.43
HDAC6-202ENST00000376610 GPRC5DQ9NZD1 345 aa23.96■■□□□ 1.43
HDAC6-202ENST00000376610 RASSF10A6NK89 507 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 ATP5J2-PTCD1G3V325 749 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 CXCL9Q07325 125 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 GOLGA2Q08379 1002 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 TNIP1Q15025 636 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 CIAPIN1Q6FI81 312 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 FAM89AQ96GI7 184 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 BCL2L13Q9BXK5 485 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 IFT57Q9NWB7 429 aa23.95■■□□□ 1.42
HDAC6-202ENST00000376610 DDX60Q8IY21 1712 aaKnown RBP23.95■■□□□ 1.42
HDAC6-202ENST00000376610 TAF1P21675 1872 aa23.94■■□□□ 1.42
HDAC6-202ENST00000376610 APAF1O14727 1248 aa23.94■■□□□ 1.42
HDAC6-202ENST00000376610 RIC3Q7Z5B4 369 aa23.94■■□□□ 1.42
HDAC6-202ENST00000376610 CDHR2Q9BYE9 1310 aa23.93■■□□□ 1.42
HDAC6-202ENST00000376610 HSP90B1P14625 803 aaKnown RBP23.93■■□□□ 1.42
HDAC6-202ENST00000376610 GMPSP49915 693 aaPredicted RBP23.93■■□□□ 1.42
HDAC6-202ENST00000376610 CHMP4AQ9BY43 222 aa23.93■■□□□ 1.42
HDAC6-202ENST00000376610 FOXN1O15353 648 aa23.92■■□□□ 1.42
HDAC6-202ENST00000376610 CTCFP49711 727 aaPredicted RBP23.92■■□□□ 1.42
HDAC6-202ENST00000376610 SF3B3Q15393 1217 aaKnown RBP23.92■■□□□ 1.42
HDAC6-202ENST00000376610 TRPM7Q96QT4 1865 aa23.92■■□□□ 1.42
HDAC6-202ENST00000376610 LRRC37AA6NMS7 1700 aa23.91■■□□□ 1.42
HDAC6-202ENST00000376610 RAD17O75943 681 aa23.91■■□□□ 1.42
HDAC6-202ENST00000376610 ZNF853P0CG23 659 aa23.91■■□□□ 1.42
HDAC6-202ENST00000376610 TRIM28Q13263 835 aaKnown RBP23.91■■□□□ 1.42
HDAC6-202ENST00000376610 RTL5Q5HYW3 569 aaPredicted RBP23.91■■□□□ 1.42
HDAC6-202ENST00000376610 PAXIP1Q6ZW49 1069 aaPredicted RBP23.91■■□□□ 1.42
HDAC6-202ENST00000376610 IRS4O14654 1257 aaPredicted RBP23.9■■□□□ 1.42
HDAC6-202ENST00000376610 NSFL1CQ9UNZ2 370 aaKnown RBP23.9■■□□□ 1.42
HDAC6-202ENST00000376610 WDR33Q9C0J8 1336 aaKnown RBP23.89■■□□□ 1.42
HDAC6-202ENST00000376610 ELL2O00472 640 aaPredicted RBP23.89■■□□□ 1.41
HDAC6-202ENST00000376610 MAP2K1Q02750 393 aaPredicted RBP23.89■■□□□ 1.41
HDAC6-202ENST00000376610 WASHC4Q2M389 1173 aa23.89■■□□□ 1.41
HDAC6-202ENST00000376610 CELF1Q92879 486 aaKnown RBP23.89■■□□□ 1.41
HDAC6-202ENST00000376610 PRDM10Q9NQV6 1147 aa23.89■■□□□ 1.41
HDAC6-202ENST00000376610 ECE1P42892 770 aa23.88■■□□□ 1.41
HDAC6-202ENST00000376610 WBP1LQ9NX94 342 aa23.88■■□□□ 1.41
HDAC6-202ENST00000376610 DUOX1Q9NRD9 1551 aa23.87■■□□□ 1.41
HDAC6-202ENST00000376610 C6orf229H3BNL8 230 aa23.87■■□□□ 1.41
HDAC6-202ENST00000376610 TRAF5O00463 557 aa23.87■■□□□ 1.41
HDAC6-202ENST00000376610 ZBTB38Q8NAP3 1195 aaPredicted RBP23.87■■□□□ 1.41
HDAC6-202ENST00000376610 EYA3Q99504 573 aa23.87■■□□□ 1.41
HDAC6-202ENST00000376610 H7C1D1 291 aa23.86■■□□□ 1.41
HDAC6-202ENST00000376610 DDX58O95786 925 aaKnown RBP23.86■■□□□ 1.41
HDAC6-202ENST00000376610 ZC3H15Q8WU90 426 aaKnown RBP23.86■■□□□ 1.41
HDAC6-202ENST00000376610 PHAXQ9H814 394 aaKnown RBP23.86■■□□□ 1.41
HDAC6-202ENST00000376610 RPS8P62241 208 aaKnown RBP23.85■■□□□ 1.41
HDAC6-202ENST00000376610 FMR1Q06787 632 aaKnown RBP eCLIP23.85■■□□□ 1.41
HDAC6-202ENST00000376610 GRM1Q13255 1194 aa23.85■■□□□ 1.41
HDAC6-202ENST00000376610 CCDC30Q5VVM6 783 aa23.85■■□□□ 1.41
HDAC6-202ENST00000376610 MYD88Q99836 296 aa23.85■■□□□ 1.41
HDAC6-202ENST00000376610 CNOT7Q9UIV1 285 aaKnown RBP23.85■■□□□ 1.41
HDAC6-202ENST00000376610 YDJCA8MPS7 323 aa23.84■■□□□ 1.41
HDAC6-202ENST00000376610 RIMBP2O15034 1052 aa23.84■■□□□ 1.41
HDAC6-202ENST00000376610 CCDC191Q8NCU4 936 aa23.84■■□□□ 1.41
HDAC6-202ENST00000376610 CAPNS2Q96L46 248 aa23.84■■□□□ 1.41
HDAC6-202ENST00000376610 BEGAINQ9BUH8 593 aa23.84■■□□□ 1.41
HDAC6-202ENST00000376610 GPSM2P81274 684 aa23.83■■□□□ 1.41
HDAC6-202ENST00000376610 CCDC152Q4G0S7 254 aa23.83■■□□□ 1.41
HDAC6-202ENST00000376610 CST9Q5W186 159 aa23.83■■□□□ 1.41
HDAC6-202ENST00000376610 DBNDD1Q9H9R9 158 aa23.83■■□□□ 1.41
HDAC6-202ENST00000376610 CWC25Q9NXE8 425 aaPredicted RBP23.83■■□□□ 1.41
HDAC6-202ENST00000376610 TLL2Q9Y6L7 1015 aa23.83■■□□□ 1.41
HDAC6-202ENST00000376610 CELF2O95319 508 aaKnown RBP23.82■■□□□ 1.4
HDAC6-202ENST00000376610 MICALL2Q8IY33 904 aa23.82■■□□□ 1.4
HDAC6-202ENST00000376610 C8orf58Q8NAV2 365 aa23.82■■□□□ 1.4
HDAC6-202ENST00000376610 GLIS2Q9BZE0 524 aaPredicted RBP23.82■■□□□ 1.4
HDAC6-202ENST00000376610 POLLQ9UGP5 575 aa23.82■■□□□ 1.4
HDAC6-202ENST00000376610 PGAP2Q9UHJ9 254 aa23.82■■□□□ 1.4
HDAC6-202ENST00000376610 G3V3G9 751 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 PSMD14O00487 310 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 PCCAP05165 728 aaPredicted RBP23.81■■□□□ 1.4
HDAC6-202ENST00000376610 LBX1P52954 281 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 DCAF8Q5TAQ9 597 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 CDC37L1Q7L3B6 337 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 TRPM4Q8TD43 1214 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 DPF2Q92785 391 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 GPR101Q96P66 508 aaPredicted RBP23.81■■□□□ 1.4
HDAC6-202ENST00000376610 ANKIB1Q9P2G1 1089 aa23.81■■□□□ 1.4
HDAC6-202ENST00000376610 ECE2O60344 883 aa23.8■■□□□ 1.4
HDAC6-202ENST00000376610 PDE8AO60658 829 aa23.8■■□□□ 1.4
HDAC6-202ENST00000376610 RPS12P25398 132 aaKnown RBP23.8■■□□□ 1.4
HDAC6-202ENST00000376610 CYP4F22Q6NT55 531 aa23.8■■□□□ 1.4
HDAC6-202ENST00000376610 METTL22Q9BUU2 404 aaPredicted RBP23.8■■□□□ 1.4
HDAC6-202ENST00000376610 ZC3H12CQ9C0D7 883 aaKnown RBP23.8■■□□□ 1.4
HDAC6-202ENST00000376610 HIRAP54198 1017 aaPredicted RBP23.79■■□□□ 1.4
HDAC6-202ENST00000376610 TBC1D16Q8TBP0 767 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms