RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 KIAA2012Q0VF49 1180 aa30.21■■■□□ 2.43
C9orf47-202ENST00000375850 ANKRD13DQ6ZTN6 518 aa30.21■■■□□ 2.43
C9orf47-202ENST00000375850 CFAP44Q96MT7 982 aa30.21■■■□□ 2.43
C9orf47-202ENST00000375850 ABT1Q9ULW3 272 aaKnown RBP30.21■■■□□ 2.43
C9orf47-202ENST00000375850 HYPKQ9NX55 129 aa30.2■■■□□ 2.43
C9orf47-202ENST00000375850 WBP1LQ9NX94 342 aa30.2■■■□□ 2.43
C9orf47-202ENST00000375850 CAPN15O75808 1086 aa30.19■■■□□ 2.42
C9orf47-202ENST00000375850 CXCL9Q07325 125 aa30.19■■■□□ 2.42
C9orf47-202ENST00000375850 KRT24Q2M2I5 525 aa30.19■■■□□ 2.42
C9orf47-202ENST00000375850 LTBP1Q14766 1721 aa30.19■■■□□ 2.42
C9orf47-202ENST00000375850 MAP2K1Q02750 393 aaPredicted RBP30.18■■■□□ 2.42
C9orf47-202ENST00000375850 TNIP1Q15025 636 aa30.18■■■□□ 2.42
C9orf47-202ENST00000375850 CIAPIN1Q6FI81 312 aa30.18■■■□□ 2.42
C9orf47-202ENST00000375850 SLC51AQ86UW1 340 aa30.18■■■□□ 2.42
C9orf47-202ENST00000375850 ADAMTS8Q9UP79 889 aa30.18■■■□□ 2.42
C9orf47-202ENST00000375850 ISCA1Q9BUE6 129 aa30.17■■■□□ 2.42
C9orf47-202ENST00000375850 WDR33Q9C0J8 1336 aaKnown RBP30.17■■■□□ 2.42
C9orf47-202ENST00000375850 ECE1P42892 770 aa30.16■■■□□ 2.42
C9orf47-202ENST00000375850 CALD1Q05682 793 aaKnown RBP30.15■■■□□ 2.42
C9orf47-202ENST00000375850 TRIM28Q13263 835 aaKnown RBP30.15■■■□□ 2.42
C9orf47-202ENST00000375850 SF3B3Q15393 1217 aaKnown RBP30.15■■■□□ 2.42
C9orf47-202ENST00000375850 ZC3H15Q8WU90 426 aaKnown RBP30.14■■■□□ 2.42
C9orf47-202ENST00000375850 HSP90B1P14625 803 aaKnown RBP30.13■■■□□ 2.41
C9orf47-202ENST00000375850 GMPSP49915 693 aaPredicted RBP30.13■■■□□ 2.41
C9orf47-202ENST00000375850 DUSP27Q5VZP5 1158 aa30.13■■■□□ 2.41
C9orf47-202ENST00000375850 BCL2L13Q9BXK5 485 aa30.12■■■□□ 2.41
C9orf47-202ENST00000375850 CHMP4AQ9BY43 222 aa30.12■■■□□ 2.41
C9orf47-202ENST00000375850 PGAP2Q9UHJ9 254 aa30.12■■■□□ 2.41
C9orf47-202ENST00000375850 LAMB2P55268 1798 aa30.11■■■□□ 2.41
C9orf47-202ENST00000375850 FAM89AQ96GI7 184 aa30.1■■■□□ 2.41
C9orf47-202ENST00000375850 MBIPQ9NS73 344 aa30.1■■■□□ 2.41
C9orf47-202ENST00000375850 CAPNS2Q96L46 248 aa30.09■■■□□ 2.41
C9orf47-202ENST00000375850 PRKRIP1Q9H875 184 aaPredicted RBP30.09■■■□□ 2.41
C9orf47-202ENST00000375850 IFT57Q9NWB7 429 aa30.09■■■□□ 2.41
C9orf47-202ENST00000375850 TLL2Q9Y6L7 1015 aa30.09■■■□□ 2.41
C9orf47-202ENST00000375850 RAD17O75943 681 aa30.08■■■□□ 2.41
C9orf47-202ENST00000375850 ZNF853P0CG23 659 aa30.08■■■□□ 2.41
C9orf47-202ENST00000375850 GNAI1P63096 354 aa30.08■■■□□ 2.41
C9orf47-202ENST00000375850 GOLGA2Q08379 1002 aa30.08■■■□□ 2.41
C9orf47-202ENST00000375850 CST9Q5W186 159 aa30.08■■■□□ 2.41
C9orf47-202ENST00000375850 ATP5J2-PTCD1G3V325 749 aa30.07■■■□□ 2.4
C9orf47-202ENST00000375850 WASHC4Q2M389 1173 aa30.07■■■□□ 2.4
C9orf47-202ENST00000375850 LRRC37AA6NMS7 1700 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 H7C1D1 291 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 TRAF5O00463 557 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 LBX1P52954 281 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 PAXIP1Q6ZW49 1069 aaPredicted RBP30.06■■■□□ 2.4
C9orf47-202ENST00000375850 DPF2Q92785 391 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 HHIPL1Q96JK4 782 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 EYA3Q99504 573 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 BEGAINQ9BUH8 593 aa30.06■■■□□ 2.4
C9orf47-202ENST00000375850 NSFL1CQ9UNZ2 370 aaKnown RBP30.06■■■□□ 2.4
C9orf47-202ENST00000375850 IRS4O14654 1257 aaPredicted RBP30.05■■■□□ 2.4
C9orf47-202ENST00000375850 RIC3Q7Z5B4 369 aa30.05■■■□□ 2.4
C9orf47-202ENST00000375850 CELF1Q92879 486 aaKnown RBP30.05■■■□□ 2.4
C9orf47-202ENST00000375850 DUOX1Q9NRD9 1551 aa30.04■■■□□ 2.4
C9orf47-202ENST00000375850 HSPA8P11142 646 aaKnown RBP30.04■■■□□ 2.4
C9orf47-202ENST00000375850 CDC37L1Q7L3B6 337 aa30.04■■■□□ 2.4
C9orf47-202ENST00000375850 ZBTB38Q8NAP3 1195 aaPredicted RBP30.04■■■□□ 2.4
C9orf47-202ENST00000375850 GPR101Q96P66 508 aaPredicted RBP30.04■■■□□ 2.4
C9orf47-202ENST00000375850 CNOT7Q9UIV1 285 aaKnown RBP30.04■■■□□ 2.4
C9orf47-202ENST00000375850 YDJCA8MPS7 323 aa30.03■■■□□ 2.4
C9orf47-202ENST00000375850 MAP2K2P36507 400 aa30.03■■■□□ 2.4
C9orf47-202ENST00000375850 FMR1Q06787 632 aaKnown RBP eCLIP30.03■■■□□ 2.4
C9orf47-202ENST00000375850 THSD7BQ9C0I4 1608 aa30.03■■■□□ 2.4
C9orf47-202ENST00000375850 DDX60Q8IY21 1712 aaKnown RBP30.02■■■□□ 2.4
C9orf47-202ENST00000375850 CELF2O95319 508 aaKnown RBP30.02■■■□□ 2.4
C9orf47-202ENST00000375850 RPS12P25398 132 aaKnown RBP30.02■■■□□ 2.4
C9orf47-202ENST00000375850 RPS8P62241 208 aaKnown RBP30.02■■■□□ 2.4
C9orf47-202ENST00000375850 C6orf229H3BNL8 230 aa30.01■■■□□ 2.39
C9orf47-202ENST00000375850 APAF1O14727 1248 aa30.01■■■□□ 2.39
C9orf47-202ENST00000375850 CYP4F22Q6NT55 531 aa30.01■■■□□ 2.39
C9orf47-202ENST00000375850 SAPCD2Q86UD0 394 aa30.01■■■□□ 2.39
C9orf47-202ENST00000375850 TRPM7Q96QT4 1865 aa30.01■■■□□ 2.39
C9orf47-202ENST00000375850 CCDC191Q8NCU4 936 aa30■■■□□ 2.39
C9orf47-202ENST00000375850 GLIS2Q9BZE0 524 aaPredicted RBP30■■■□□ 2.39
C9orf47-202ENST00000375850 DDX58O95786 925 aaKnown RBP29.99■■■□□ 2.39
C9orf47-202ENST00000375850 HIRAP54198 1017 aaPredicted RBP29.99■■■□□ 2.39
C9orf47-202ENST00000375850 MICALL2Q8IY33 904 aa29.99■■■□□ 2.39
C9orf47-202ENST00000375850 GPSM2P81274 684 aa29.98■■■□□ 2.39
C9orf47-202ENST00000375850 RTL5Q5HYW3 569 aaPredicted RBP29.98■■■□□ 2.39
C9orf47-202ENST00000375850 TRPM4Q8TD43 1214 aa29.98■■■□□ 2.39
C9orf47-202ENST00000375850 ZNF428Q96B54 188 aa29.98■■■□□ 2.39
C9orf47-202ENST00000375850 PODXL2Q9NZ53 605 aa29.98■■■□□ 2.39
C9orf47-202ENST00000375850 POLLQ9UGP5 575 aa29.98■■■□□ 2.39
C9orf47-202ENST00000375850 PSMD14O00487 310 aa29.97■■■□□ 2.39
C9orf47-202ENST00000375850 CA12O43570 354 aa29.97■■■□□ 2.39
C9orf47-202ENST00000375850 DBNDD1Q9H9R9 158 aa29.97■■■□□ 2.39
C9orf47-202ENST00000375850 PCCAP05165 728 aaPredicted RBP29.96■■■□□ 2.39
C9orf47-202ENST00000375850 GRM1Q13255 1194 aa29.96■■■□□ 2.39
C9orf47-202ENST00000375850 CCDC152Q4G0S7 254 aa29.96■■■□□ 2.39
C9orf47-202ENST00000375850 CCDC30Q5VVM6 783 aa29.96■■■□□ 2.39
C9orf47-202ENST00000375850 TBC1D16Q8TBP0 767 aa29.96■■■□□ 2.39
C9orf47-202ENST00000375850 ZC3H12CQ9C0D7 883 aaKnown RBP29.96■■■□□ 2.39
C9orf47-202ENST00000375850 PHAXQ9H814 394 aaKnown RBP29.96■■■□□ 2.39
C9orf47-202ENST00000375850 RIMBP2O15034 1052 aa29.95■■■□□ 2.39
C9orf47-202ENST00000375850 ECE2O60344 883 aa29.95■■■□□ 2.39
C9orf47-202ENST00000375850 MYD88Q99836 296 aa29.95■■■□□ 2.39
C9orf47-202ENST00000375850 CWC25Q9NXE8 425 aaPredicted RBP29.95■■■□□ 2.39
C9orf47-202ENST00000375850 ZBTB12Q9Y330 459 aaPredicted RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms