RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ZKSCAN1P17029 563 aaPredicted RBP16.78■□□□□ 0.28
CLCNKA-202ENST00000375692 AACSQ86V21 672 aa16.78■□□□□ 0.28
CLCNKA-202ENST00000375692 KCNB2Q92953 911 aa16.78■□□□□ 0.28
CLCNKA-202ENST00000375692 ADCY9O60503 1353 aa16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 CYP27B1O15528 508 aa16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 TYRO3Q06418 890 aa16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 NMIQ13287 307 aaPredicted RBP16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 MAP3K11Q16584 847 aa16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 C9orf78Q9NZ63 289 aaPredicted RBP16.77■□□□□ 0.28
CLCNKA-202ENST00000375692 LMO7Q8WWI1 1683 aa16.77■□□□□ 0.27
CLCNKA-202ENST00000375692 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.27
CLCNKA-202ENST00000375692 KRT85P78386 507 aa16.77■□□□□ 0.27
CLCNKA-202ENST00000375692 FAM200AQ8TCP9 573 aa16.77■□□□□ 0.27
CLCNKA-202ENST00000375692 ZHX1Q9UKY1 873 aaPredicted RBP16.77■□□□□ 0.27
CLCNKA-202ENST00000375692 N4BP2Q86UW6 1770 aaPredicted RBP16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 LRMPQ12912 555 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 CWF19L2Q2TBE0 894 aaKnown RBP16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 CERKQ8TCT0 537 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 CCDC8Q9H0W5 538 aaPredicted RBP16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 DACT1Q9NYF0 836 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 NRBP1Q9UHY1 535 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 STK3Q13188 491 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 EVI5LQ96CN4 794 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 MAP3K2Q9Y2U5 619 aa16.76■□□□□ 0.27
CLCNKA-202ENST00000375692 SLC27A2O14975 620 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 ZSCAN20P17040 1043 aaPredicted RBP16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 MAP4K1Q92918 833 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 GOLGA6L6A8MZA4 724 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 PHKG2P15735 406 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 TEFQ10587 303 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 ANO6Q4KMQ2 910 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 CCDC186Q7Z3E2 898 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 CBX8Q9HC52 389 aa16.75■□□□□ 0.27
CLCNKA-202ENST00000375692 PHLPP1O60346 1717 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 EAF2Q96CJ1 260 aaPredicted RBP16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 GPATCH3Q96I76 525 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 CARD10Q9BWT7 1032 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 TNMDQ9H2S6 317 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 TLR7Q9NYK1 1049 aaKnown RBP16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 A0A0D9SFI3 127 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 TPM3P06753 285 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 MTX1Q13505 466 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 DRC7Q8IY82 874 aa16.74■□□□□ 0.27
CLCNKA-202ENST00000375692 BTBD11A6QL63 1104 aa16.73■□□□□ 0.27
CLCNKA-202ENST00000375692 SASH1O94885 1247 aa16.73■□□□□ 0.27
CLCNKA-202ENST00000375692 PDCL2Q8N4E4 241 aa16.73■□□□□ 0.27
CLCNKA-202ENST00000375692 BOLA2Q9H3K6 86 aa16.73■□□□□ 0.27
CLCNKA-202ENST00000375692 PRAMEF22A3QJZ6 481 aa16.73■□□□□ 0.27
CLCNKA-202ENST00000375692 GOLGA6L4A6NEF3 574 aa16.73■□□□□ 0.27
CLCNKA-202ENST00000375692 SPATA32Q96LK8 384 aa16.73■□□□□ 0.27
CLCNKA-202ENST00000375692 BLOC1S2Q6QNY1 142 aa16.72■□□□□ 0.27
CLCNKA-202ENST00000375692 NFATC2IPQ8NCF5 419 aa16.72■□□□□ 0.27
CLCNKA-202ENST00000375692 SIL1Q9H173 461 aa16.72■□□□□ 0.27
CLCNKA-202ENST00000375692 DMTNQ08495 405 aa16.72■□□□□ 0.27
CLCNKA-202ENST00000375692 ABCC6O95255 1503 aa16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 IL2RBP14784 551 aa16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 U2AF2P26368 475 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 TOB2Q14106 344 aaPredicted RBP16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 LEO1Q8WVC0 666 aaPredicted RBP16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 TRIM5Q9C035 493 aa16.71■□□□□ 0.27
CLCNKA-202ENST00000375692 NR1I2O75469 434 aa16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 PSMA5P28066 241 aa16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 ZCRB1Q8TBF4 217 aaKnown RBP16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 KAZALD1Q96I82 304 aa16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 SUCLG2Q96I99 432 aa16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 C16orf45Q96MC5 204 aaPredicted RBP16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.26
CLCNKA-202ENST00000375692 ELP1O95163 1332 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 ERC1Q8IUD2 1116 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 EDC3Q96F86 508 aaKnown RBP16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 DDX11Q96FC9 970 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 FSD1Q9BTV5 496 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 JAK2O60674 1132 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 HOXB7P09629 217 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 PDCP20941 246 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 RPS6KB1P23443 525 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 BCL11BQ9C0K0 894 aaPredicted RBP16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 DNAJC25Q9H1X3 360 aa16.7■□□□□ 0.26
CLCNKA-202ENST00000375692 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.69■□□□□ 0.26
CLCNKA-202ENST00000375692 ANKRD7Q92527 254 aa16.69■□□□□ 0.26
CLCNKA-202ENST00000375692 SCAND2PQ9GZW5 306 aaPredicted RBP16.69■□□□□ 0.26
CLCNKA-202ENST00000375692 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
CLCNKA-202ENST00000375692 CTIFO43310 598 aaKnown RBP16.69■□□□□ 0.26
CLCNKA-202ENST00000375692 ZNF75DP51815 510 aa16.69■□□□□ 0.26
CLCNKA-202ENST00000375692 AIMP1Q12904 312 aaKnown RBP16.69■□□□□ 0.26
CLCNKA-202ENST00000375692 G3BP1Q13283 466 aaKnown RBP eCLIP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms