RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
CCDC40-202ENST00000374876 ATP8B2P98198 1209 aa19■□□□□ 0.63
CCDC40-202ENST00000374876 TPTE2Q6XPS3 522 aa19■□□□□ 0.63
CCDC40-202ENST00000374876 NLRP10Q86W26 655 aa19■□□□□ 0.63
CCDC40-202ENST00000374876 CNBD1Q8NA66 436 aa19■□□□□ 0.63
CCDC40-202ENST00000374876 CD2APQ9Y5K6 639 aa19■□□□□ 0.63
CCDC40-202ENST00000374876 ARFGEF2Q9Y6D5 1785 aa19■□□□□ 0.63
CCDC40-202ENST00000374876 GTF2E1P29083 439 aaPredicted RBP19■□□□□ 0.63
CCDC40-202ENST00000374876 ISCA1Q9BUE6 129 aa19■□□□□ 0.63
CCDC40-202ENST00000374876 HSP90AA1P07900 732 aaKnown RBP18.99■□□□□ 0.63
CCDC40-202ENST00000374876 MCM4P33991 863 aa18.99■□□□□ 0.63
CCDC40-202ENST00000374876 LRRCC1Q9C099 1032 aa18.99■□□□□ 0.63
CCDC40-202ENST00000374876 OSBPL3Q9H4L5 887 aa18.99■□□□□ 0.63
CCDC40-202ENST00000374876 LRRFIP2Q9Y608 721 aaKnown RBP18.99■□□□□ 0.63
CCDC40-202ENST00000374876 K7ELQ4 463 aaPredicted RBP18.98■□□□□ 0.63
CCDC40-202ENST00000374876 UBTFL1P0CB47 393 aaPredicted RBP18.98■□□□□ 0.63
CCDC40-202ENST00000374876 PDE1AP54750 535 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 PARP10Q53GL7 1025 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 SYNE4Q8N205 404 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 WWC3Q9ULE0 1092 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 A0A0G2JLW4 131 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 PNMA6EA0A0J9YXQ4 647 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 DDIT3P35638 169 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 ERFEQ4G0M1 354 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 PPP1R42Q7Z4L9 355 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 DNAAF4Q8WXU2 420 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 USP44Q9H0E7 712 aa18.98■□□□□ 0.63
CCDC40-202ENST00000374876 NRXN2Q9P2S2 1712 aa18.97■□□□□ 0.63
CCDC40-202ENST00000374876 GOLGB1Q14789 3259 aaKnown RBP18.97■□□□□ 0.63
CCDC40-202ENST00000374876 NTSR2O95665 410 aa18.97■□□□□ 0.63
CCDC40-202ENST00000374876 IGKV5-2P06315 115 aa18.97■□□□□ 0.63
CCDC40-202ENST00000374876 CWF19L2Q2TBE0 894 aaKnown RBP18.97■□□□□ 0.63
CCDC40-202ENST00000374876 UTP14AQ9BVJ6 771 aaKnown RBP18.97■□□□□ 0.63
CCDC40-202ENST00000374876 TRMT112Q9UI30 125 aaKnown RBP18.97■□□□□ 0.63
CCDC40-202ENST00000374876 C10orf71Q711Q0 1435 aa18.97■□□□□ 0.63
CCDC40-202ENST00000374876 CD2BP2O95400 341 aaKnown RBP18.96■□□□□ 0.63
CCDC40-202ENST00000374876 ST5P78524 1137 aa18.96■□□□□ 0.63
CCDC40-202ENST00000374876 RABEP1Q15276 862 aa18.96■□□□□ 0.63
CCDC40-202ENST00000374876 JARID2Q92833 1246 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-202ENST00000374876 NYXQ9GZU5 481 aa18.96■□□□□ 0.63
CCDC40-202ENST00000374876 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-202ENST00000374876 ANKRD36CQ5JPF3 1778 aa18.96■□□□□ 0.63
CCDC40-202ENST00000374876 N4BP2Q86UW6 1770 aaPredicted RBP18.96■□□□□ 0.63
CCDC40-202ENST00000374876 CHRNA5P30532 468 aa18.96■□□□□ 0.63
CCDC40-202ENST00000374876 NEXNQ0ZGT2 675 aa18.96■□□□□ 0.63
CCDC40-202ENST00000374876 SRCIN1Q9C0H9 1055 aa18.96■□□□□ 0.63
CCDC40-202ENST00000374876 REC8O95072 547 aa18.95■□□□□ 0.62
CCDC40-202ENST00000374876 DPEP1P16444 411 aa18.95■□□□□ 0.62
CCDC40-202ENST00000374876 TRIM28Q13263 835 aaKnown RBP18.95■□□□□ 0.62
CCDC40-202ENST00000374876 FAM89AQ96GI7 184 aa18.95■□□□□ 0.62
CCDC40-202ENST00000374876 IBTKQ9P2D0 1353 aaPredicted RBP18.95■□□□□ 0.62
CCDC40-202ENST00000374876 BRIP1Q9BX63 1249 aa18.95■□□□□ 0.62
CCDC40-202ENST00000374876 TGFB2P61812 414 aa18.94■□□□□ 0.62
CCDC40-202ENST00000374876 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 NEURL1BA8MQ27 555 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 MX1P20591 662 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 CCDC191Q8NCU4 936 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 CWC25Q9NXE8 425 aaPredicted RBP18.93■□□□□ 0.62
CCDC40-202ENST00000374876 KIF13BQ9NQT8 1826 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 UTRNP46939 3433 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 ERC2O15083 957 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 BEND3Q5T5X7 828 aa18.93■□□□□ 0.62
CCDC40-202ENST00000374876 SALL3Q9BXA9 1300 aa18.92■□□□□ 0.62
CCDC40-202ENST00000374876 HCLS1P14317 486 aaPredicted RBP18.92■□□□□ 0.62
CCDC40-202ENST00000374876 KCNA3P22001 575 aa18.92■□□□□ 0.62
CCDC40-202ENST00000374876 C2CD5Q86YS7 1000 aa18.92■□□□□ 0.62
CCDC40-202ENST00000374876 ANKRD31Q8N7Z5 1873 aa18.92■□□□□ 0.62
CCDC40-202ENST00000374876 DDX11L8A8MPP1 907 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 PDE6BP35913 854 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 LINS1Q8NG48 757 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 SH3TC1Q8TE82 1336 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 TSHZ3Q63HK5 1081 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 C3orf67Q6ZVT6 689 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 SSH3Q8TE77 659 aa18.91■□□□□ 0.62
CCDC40-202ENST00000374876 H0YIN7 160 aa18.9■□□□□ 0.62
CCDC40-202ENST00000374876 ZBTB38Q8NAP3 1195 aaPredicted RBP18.9■□□□□ 0.62
CCDC40-202ENST00000374876 GCKRQ14397 625 aa18.9■□□□□ 0.62
CCDC40-202ENST00000374876 SLC10A5Q5PT55 438 aa18.9■□□□□ 0.62
CCDC40-202ENST00000374876 TNPO1Q92973 898 aaKnown RBP18.9■□□□□ 0.62
CCDC40-202ENST00000374876 RAB3GAP1Q15042 981 aa18.89■□□□□ 0.61
CCDC40-202ENST00000374876 ZNF622Q969S3 477 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC40-202ENST00000374876 STAP2Q9UGK3 403 aa18.89■□□□□ 0.61
CCDC40-202ENST00000374876 KIAA1551Q9HCM1 1747 aa18.89■□□□□ 0.61
CCDC40-202ENST00000374876 RAB11FIP3O75154 756 aa18.88■□□□□ 0.61
CCDC40-202ENST00000374876 GBP4Q96PP9 640 aa18.88■□□□□ 0.61
CCDC40-202ENST00000374876 TRIM6-TRIM34B2RNG4 842 aa18.88■□□□□ 0.61
CCDC40-202ENST00000374876 IRS4O14654 1257 aaPredicted RBP18.88■□□□□ 0.61
CCDC40-202ENST00000374876 TRAK2O60296 914 aa18.88■□□□□ 0.61
CCDC40-202ENST00000374876 PCCAP05165 728 aaPredicted RBP18.88■□□□□ 0.61
CCDC40-202ENST00000374876 SRGNP10124 158 aa18.88■□□□□ 0.61
CCDC40-202ENST00000374876 UBE3BQ7Z3V4 1068 aa18.88■□□□□ 0.61
CCDC40-202ENST00000374876 NLRP3Q96P20 1036 aa18.88■□□□□ 0.61
CCDC40-202ENST00000374876 KLRG2A4D1S0 409 aaPredicted RBP18.87■□□□□ 0.61
CCDC40-202ENST00000374876 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
CCDC40-202ENST00000374876 ST18O60284 1047 aa18.87■□□□□ 0.61
CCDC40-202ENST00000374876 SURF6O75683 361 aaKnown RBP18.87■□□□□ 0.61
CCDC40-202ENST00000374876 NBPF7P0C2Y1 421 aaPredicted RBP18.87■□□□□ 0.61
CCDC40-202ENST00000374876 POLA2Q14181 598 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms