RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 PTPN12Q05209 780 aaKnown RBP21.36■■□□□ 1.01
HLA-DMA-201ENST00000374843 CHD1LQ86WJ1 897 aa21.36■■□□□ 1.01
HLA-DMA-201ENST00000374843 CNBD1Q8NA66 436 aa21.36■■□□□ 1.01
HLA-DMA-201ENST00000374843 SURF6O75683 361 aaKnown RBP21.35■■□□□ 1.01
HLA-DMA-201ENST00000374843 MSH5O43196 834 aa21.34■■□□□ 1.01
HLA-DMA-201ENST00000374843 SF3B3Q15393 1217 aaKnown RBP21.34■■□□□ 1.01
HLA-DMA-201ENST00000374843 PRR5LQ6MZQ0 368 aa21.34■■□□□ 1.01
HLA-DMA-201ENST00000374843 ERC1Q8IUD2 1116 aa21.34■■□□□ 1.01
HLA-DMA-201ENST00000374843 GREM2Q9H772 168 aa21.34■■□□□ 1.01
HLA-DMA-201ENST00000374843 FBXO3Q9UK99 471 aa21.34■■□□□ 1.01
HLA-DMA-201ENST00000374843 PA2G4Q9UQ80 394 aaKnown RBP21.34■■□□□ 1.01
HLA-DMA-201ENST00000374843 SERPINB2P05120 415 aa21.33■■□□□ 1.01
HLA-DMA-201ENST00000374843 CCDC152Q4G0S7 254 aa21.33■■□□□ 1.01
HLA-DMA-201ENST00000374843 ANKRD45Q5TZF3 282 aa21.33■■□□□ 1.01
HLA-DMA-201ENST00000374843 SLC16A10Q8TF71 515 aa21.33■■□□□ 1.01
HLA-DMA-201ENST00000374843 CHMP3Q9Y3E7 222 aa21.33■■□□□ 1.01
HLA-DMA-201ENST00000374843 CIAO1O76071 339 aa21.32■■□□□ 1
HLA-DMA-201ENST00000374843 IFIT5Q13325 482 aaKnown RBP21.32■■□□□ 1
HLA-DMA-201ENST00000374843 CCDC57Q2TAC2 916 aa21.32■■□□□ 1
HLA-DMA-201ENST00000374843 KIF1BPQ96EK5 621 aa21.32■■□□□ 1
HLA-DMA-201ENST00000374843 LRRCC1Q9C099 1032 aa21.32■■□□□ 1
HLA-DMA-201ENST00000374843 ITGA6P23229 1130 aa21.31■■□□□ 1
HLA-DMA-201ENST00000374843 PDE4AP27815 886 aa21.31■■□□□ 1
HLA-DMA-201ENST00000374843 GTF2E1P29083 439 aaPredicted RBP21.31■■□□□ 1
HLA-DMA-201ENST00000374843 C3orf67Q6ZVT6 689 aa21.31■■□□□ 1
HLA-DMA-201ENST00000374843 KLHDC4Q8TBB5 520 aa21.31■■□□□ 1
HLA-DMA-201ENST00000374843 LNPKQ9C0E8 428 aa21.31■■□□□ 1
HLA-DMA-201ENST00000374843 ANKRD18BA2A2Z9 1011 aa21.3■■□□□ 1
HLA-DMA-201ENST00000374843 MMP10P09238 476 aa21.3■■□□□ 1
HLA-DMA-201ENST00000374843 ST5P78524 1137 aa21.3■■□□□ 1
HLA-DMA-201ENST00000374843 RHPN1Q8TCX5 695 aa21.3■■□□□ 1
HLA-DMA-201ENST00000374843 ANKRD31Q8N7Z5 1873 aa21.29■■□□□ 1
HLA-DMA-201ENST00000374843 EYA2O00167 538 aa21.29■■□□□ 1
HLA-DMA-201ENST00000374843 G3BP1Q13283 466 aaKnown RBP eCLIP21.29■■□□□ 1
HLA-DMA-201ENST00000374843 SKAP1Q86WV1 359 aa21.29■■□□□ 1
HLA-DMA-201ENST00000374843 NLRP3Q96P20 1036 aa21.29■■□□□ 1
HLA-DMA-201ENST00000374843 OS9Q13438 667 aaPredicted RBP21.28■■□□□ 1
HLA-DMA-201ENST00000374843 MSL1Q68DK7 614 aa21.28■■□□□ 1
HLA-DMA-201ENST00000374843 ATG9AQ7Z3C6 839 aa21.28■■□□□ 1
HLA-DMA-201ENST00000374843 CCDC85AQ96PX6 553 aaPredicted RBP21.28■■□□□ 1
HLA-DMA-201ENST00000374843 SALL3Q9BXA9 1300 aa21.28■■□□□ 1
HLA-DMA-201ENST00000374843 COL4A1P02462 1669 aa21.28■■□□□ 1
HLA-DMA-201ENST00000374843 KLRG2A4D1S0 409 aaPredicted RBP21.27■■□□□ 1
HLA-DMA-201ENST00000374843 SASH1O94885 1247 aa21.27■■□□□ 1
HLA-DMA-201ENST00000374843 IL15P40933 162 aaPredicted RBP21.27■■□□□ 1
HLA-DMA-201ENST00000374843 CRY2Q49AN0 593 aa21.27■■□□□ 1
HLA-DMA-201ENST00000374843 ILDR2Q71H61 639 aa21.27■■□□□ 1
HLA-DMA-201ENST00000374843 PDGFDQ9GZP0 370 aaPredicted RBP21.27■■□□□ 1
HLA-DMA-201ENST00000374843 SIL1Q9H173 461 aa21.27■■□□□ 1
HLA-DMA-201ENST00000374843 ZBTB47Q9UFB7 747 aaPredicted RBP21.27■■□□□ 1
HLA-DMA-201ENST00000374843 PARP3Q9Y6F1 533 aa21.27■■□□□ 1
HLA-DMA-201ENST00000374843 NPHP1O15259 732 aa21.26■□□□□ 0.99
HLA-DMA-201ENST00000374843 SMARCA5O60264 1052 aaPredicted RBP21.26■□□□□ 0.99
HLA-DMA-201ENST00000374843 ZNF594Q96JF6 807 aaPredicted RBP21.26■□□□□ 0.99
HLA-DMA-201ENST00000374843 APBB1O00213 710 aa21.25■□□□□ 0.99
HLA-DMA-201ENST00000374843 TAF7LQ5H9L4 462 aa21.25■□□□□ 0.99
HLA-DMA-201ENST00000374843 CDC5LQ99459 802 aaKnown RBP21.25■□□□□ 0.99
HLA-DMA-201ENST00000374843 ZNF609O15014 1411 aa21.24■□□□□ 0.99
HLA-DMA-201ENST00000374843 C10orf71Q711Q0 1435 aa21.24■□□□□ 0.99
HLA-DMA-201ENST00000374843 CCDC24Q8N4L8 307 aa21.24■□□□□ 0.99
HLA-DMA-201ENST00000374843 BRIP1Q9BX63 1249 aa21.24■□□□□ 0.99
HLA-DMA-201ENST00000374843 SEC31BQ9NQW1 1179 aa21.24■□□□□ 0.99
HLA-DMA-201ENST00000374843 RIPOR2Q9Y4F9 1068 aa21.24■□□□□ 0.99
HLA-DMA-201ENST00000374843 COL11A2P13942 1736 aaPredicted RBP21.24■□□□□ 0.99
HLA-DMA-201ENST00000374843 A0A1B0GUL6 1792 aa21.23■□□□□ 0.99
HLA-DMA-201ENST00000374843 RGS3P49796 1198 aa21.23■□□□□ 0.99
HLA-DMA-201ENST00000374843 LRRC24Q50LG9 513 aa21.23■□□□□ 0.99
HLA-DMA-201ENST00000374843 GPR108Q9NPR9 543 aa21.23■□□□□ 0.99
HLA-DMA-201ENST00000374843 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
HLA-DMA-201ENST00000374843 CLASRPQ8N2M8 674 aaKnown RBP21.22■□□□□ 0.99
HLA-DMA-201ENST00000374843 PUS3Q9BZE2 481 aaKnown RBP21.22■□□□□ 0.99
HLA-DMA-201ENST00000374843 IL1RAPL2Q9NP60 686 aa21.22■□□□□ 0.99
HLA-DMA-201ENST00000374843 HOXA10P31260 410 aaPredicted RBP21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 IGHMBP2P38935 993 aaKnown RBP21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 TFCP2Q12800 502 aa21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 LDHAL6AQ6ZMR3 332 aa21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 PLEKHM2Q8IWE5 1019 aa21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 PELP1Q8IZL8 1130 aaKnown RBP21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 OTUD7AQ8TE49 926 aaPredicted RBP21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 OSBPL3Q9H4L5 887 aa21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 AOX1Q06278 1338 aa21.21■□□□□ 0.99
HLA-DMA-201ENST00000374843 ANKRD18AQ8IVF6 992 aa21.2■□□□□ 0.98
HLA-DMA-201ENST00000374843 C16orf71Q8IYS4 520 aaPredicted RBP21.2■□□□□ 0.98
HLA-DMA-201ENST00000374843 VGLL2Q8N8G2 317 aa21.2■□□□□ 0.98
HLA-DMA-201ENST00000374843 MTFR1LQ9H019 292 aa21.2■□□□□ 0.98
HLA-DMA-201ENST00000374843 STAP2Q9UGK3 403 aa21.2■□□□□ 0.98
HLA-DMA-201ENST00000374843 MROH5Q6ZUA9 1318 aa21.2■□□□□ 0.98
HLA-DMA-201ENST00000374843 ARAP2Q8WZ64 1704 aa21.2■□□□□ 0.98
HLA-DMA-201ENST00000374843 LRRC37AA6NMS7 1700 aa21.19■□□□□ 0.98
HLA-DMA-201ENST00000374843 R3HDM1Q15032 1099 aaKnown RBP21.19■□□□□ 0.98
HLA-DMA-201ENST00000374843 TNNI3KQ59H18 835 aa21.19■□□□□ 0.98
HLA-DMA-201ENST00000374843 DDX46Q7L014 1031 aaKnown RBP21.19■□□□□ 0.98
HLA-DMA-201ENST00000374843 CNNM1Q9NRU3 951 aa21.19■□□□□ 0.98
HLA-DMA-201ENST00000374843 FPGT-TNNI3KV9GXZ4 949 aa21.19■□□□□ 0.98
HLA-DMA-201ENST00000374843 KIF13BQ9NQT8 1826 aa21.19■□□□□ 0.98
HLA-DMA-201ENST00000374843 MX1P20591 662 aa21.18■□□□□ 0.98
HLA-DMA-201ENST00000374843 PDE6BP35913 854 aa21.18■□□□□ 0.98
HLA-DMA-201ENST00000374843 GRAPQ13588 217 aa21.18■□□□□ 0.98
HLA-DMA-201ENST00000374843 GRAPLQ8TC17 118 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms